Thomas 5 anni fa
parent
commit
76c36add46
8 ha cambiato i file con 72 aggiunte e 49 eliminazioni
  1. 11 4
      presentation.aux
  2. 19 19
      presentation.fdb_latexmk
  3. 22 20
      presentation.log
  4. 13 3
      presentation.nav
  5. BIN
      presentation.pdf
  6. BIN
      presentation.synctex.gz
  7. 5 3
      presentation.tex
  8. 2 0
      presentation.toc

+ 11 - 4
presentation.aux

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+\@writefile{nav}{\defcounter {refsection}{0}\relax }\@writefile{nav}{\headcommand {\beamer@framepages {12}{12}}}
+\@writefile{nav}{\headcommand {\beamer@partpages {1}{12}}}
+\@writefile{nav}{\headcommand {\beamer@subsectionpages {12}{12}}}
+\@writefile{nav}{\headcommand {\beamer@sectionpages {12}{12}}}
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 \@writefile{nav}{\headcommand {\gdef \inserttotalframenumber {8}}}

+ 19 - 19
presentation.fdb_latexmk

@@ -1,13 +1,13 @@
 # Fdb version 3
 # Fdb version 3
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-  "presentation.bcf" 1614016577 101149 070b8d437a9377c293336e898b92955c "pdflatex"
+["biber presentation"] 1613992924 "presentation.bcf" "presentation.bbl" "presentation" 1614017588
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+  "presentation.blg"
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-  "/home/thomas/Documents/Présentations/Translocations_Capture/presentation.tex" 1614016572 4681 876a688495fa289ae36b2a208237f1c3 ""
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+  "presentation.aux"
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+  "presentation.toc"
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+ 22 - 20
presentation.log

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+ 13 - 3
presentation.nav

@@ -60,8 +60,18 @@
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+ 5 - 3
presentation.tex

@@ -81,7 +81,7 @@
     \begin{center}  
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     \begin{figure}
     \begin{figure}
         \centering
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-        \includegraphics[width=1\textwidth]{Images/translocation_10_14.pdf}
+        \includegraphics[width=\textwidth]{Images/translocation_10_14.pdf}
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     \end{figure}
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   \end{center}
   \blfootnote{Bergeron J, et al. Blood. 2007 Oct 1;110(7):2324-30.2007 Jul 3. PMID: 17609427.}
   \blfootnote{Bergeron J, et al. Blood. 2007 Oct 1;110(7):2324-30.2007 Jul 3. PMID: 17609427.}
@@ -96,7 +96,7 @@
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     \begin{figure}
         \centering
         \centering
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@@ -126,7 +126,7 @@
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   \frametitle{Méthode: analyse}
   \frametitle{Méthode: analyse}
   4) \alert{Détection} des positions ou les reads anormaux sont nombreux (SVXplorer), ces reads anormaux sont ensuites isolés (awk).\\
   4) \alert{Détection} des positions ou les reads anormaux sont nombreux (SVXplorer), ces reads anormaux sont ensuites isolés (awk).\\
-  5) \alert{Assemblage} entre eux des reads anormaux (spades) pour obtebir une \alert{séquence consensus} qui est alignée sur le génome de référence afin d'identifier les partenaires et le point de cassure (bwa mem).
+  5) \alert{Assemblage} entre eux des reads anormaux (spades) pour obtenir une \alert{séquence consensus} qui est alignée sur le génome de référence afin d'identifier les partenaires et le point de cassure (bwa mem).
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@@ -135,4 +135,6 @@
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 \end{frame}
 
 
+\section{Matériel}
+
 \end{document}
 \end{document}

+ 2 - 0
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