t

dist/index.js

@@ -91,6 +91,7 @@ var makeReference = function (sequenceName, sequence, filePath, lineN) {
                                 r = new RegExp(".{1," + lineN + "}", "g");
                                 regex_sam_restriction = /[>0-9A-Za-z!#$%&+\./:;?@^_|~-]|[\n\t]/g;
                                 nSeqName = invReplace(regex_sam_restriction, sequenceName);
+                                console.log(nSeqName);
                                 return [4 /*yield*/, fs_1.default.promises.writeFile(filePath, '>' + nSeqName + '\n' + ((_a = sequence.match(r)) === null || _a === void 0 ? void 0 : _a.join('\n')))];
                             case 1:
                                 _b.sent();

index.ts

@@ -22,6 +22,8 @@ const makeReference = async (sequenceName:string, sequence:string, filePath: str
       const r = new RegExp(".{1," + lineN + "}","g");
       const regex_sam_restriction: RegExp = /[>0-9A-Za-z!#$%&+\./:;?@^_|~-]|[\n\t]/g;
       const nSeqName = invReplace(regex_sam_restriction, sequenceName)
+      console.log(nSeqName);
+      
       await fs.promises.writeFile(filePath, '>' + nSeqName + '\n' + sequence.match(r)?.join('\n'))
       await async_exec('bwa', ['index',filePath], () => console.log)
       resolve(true)