Arguments: /usr/local/bin/node /usr/local/bin/yarn add -D accJson PATH: /usr/bin:/home/thomas/perl5/bin:/home/thomas/.local/bin:/home/thomas/.local/bin:/usr/bin:/home/thomas/perl5/bin:/home/thomas/miniconda3/bin:/home/thomas/miniconda3/condabin:/home/thomas/.local/bin:/home/thomas/.local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/snap/bin:/usr/local/go/bin:/opt/spark/bin:/opt/spark/sbin:/home/thomas/miniconda3/bin:/home/thomas/miniconda3/condabin:/home/thomas/.local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/bin:/sbin:/usr/local/go/bin:/home/thomas/go/bin:/usr/local/go/bin:/opt/spark/bin:/opt/spark/sbin:/home/thomas/miniconda3/bin:/home/thomas/miniconda3/condabin:/opt/spark/bin:/opt/spark/sbin:/home/thomas/miniconda3/bin:/home/thomas/miniconda3/condabin:/home/thomas/.local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/bin:/sbin:/usr/local/go/bin:/home/thomas/go/bin:/opt/spark/bin:/opt/spark/sbin:/home/thomas/miniconda3/bin:/home/thomas/miniconda3/condabin Yarn version: 1.22.17 Node version: 16.13.1 Platform: linux x64 Trace: Error: https://registry.yarnpkg.com/accJson: Not found at Request.params.callback [as _callback] (/usr/local/lib/node_modules/yarn/lib/cli.js:67029:18) at Request.self.callback (/usr/local/lib/node_modules/yarn/lib/cli.js:140883:22) at Request.emit (node:events:390:28) at Request. (/usr/local/lib/node_modules/yarn/lib/cli.js:141855:10) at Request.emit (node:events:390:28) at IncomingMessage. (/usr/local/lib/node_modules/yarn/lib/cli.js:141777:12) at Object.onceWrapper (node:events:509:28) at IncomingMessage.emit (node:events:402:35) at endReadableNT (node:internal/streams/readable:1343:12) at processTicksAndRejections (node:internal/process/task_queues:83:21) npm manifest: { "name": "alttranscripts", "version": "1.0.0", "description": "", "main": "index.js", "scripts": { "build": "tsc", "test": "echo \"Error: no test specified\" && exit 1" }, "keywords": [], "author": "", "license": "ISC", "devDependencies": { "@types/node": "^17.0.21", "typescript": "^4.6.2" }, "dependencies": { "aligner": "http://git.t0m4.fr/Thomas/aligner.git", "gbffparser": "http://git.t0m4.fr/Thomas/gbffParser.git", "glob": "^7.2.0" } } yarn manifest: No manifest Lockfile: # THIS IS AN AUTOGENERATED FILE. DO NOT EDIT THIS FILE DIRECTLY. # yarn lockfile v1 "@gmod/bgzf-filehandle@^1.4.2": version "1.4.2" resolved "https://registry.yarnpkg.com/@gmod/bgzf-filehandle/-/bgzf-filehandle-1.4.2.tgz#2523e50cebedfdcb49c7c040365bcb22de3ad964" integrity sha512-eJBFPvH4fqIjVtJtFXw2DKiJYqL/9bOz/cLu5Xn+nGGve2avQ62Bl5aa20SNHSZyoL1QsgY5tGzJwH0IKUtvHg== dependencies: es6-promisify "^7.0.0" generic-filehandle "^2.2.1" long "^5.1.0" pako "^1.0.11" "@types/node@^17.0.21": version "17.0.21" resolved "https://registry.yarnpkg.com/@types/node/-/node-17.0.21.tgz#864b987c0c68d07b4345845c3e63b75edd143644" integrity sha512-DBZCJbhII3r90XbQxI8Y9IjjiiOGlZ0Hr32omXIZvwwZ7p4DMMXGrKXVyPfuoBOri9XNtL0UK69jYIBIsRX3QQ== "aligner@http://git.t0m4.fr/Thomas/aligner.git": version "1.0.0" resolved "http://git.t0m4.fr/Thomas/aligner.git#ad3d55803c69f61822b4ec3eb61cf1795cd01115" dependencies: fastq "^1.13.0" ansi-styles@^4.1.0: version "4.3.0" resolved "https://registry.yarnpkg.com/ansi-styles/-/ansi-styles-4.3.0.tgz#edd803628ae71c04c85ae7a0906edad34b648937" integrity sha512-zbB9rCJAT1rbjiVDb2hqKFHNYLxgtk8NURxZ3IZwD3F6NtxbXZQCnnSi1Lkx+IDohdPlFp222wVALIheZJQSEg== dependencies: color-convert "^2.0.1" balanced-match@^1.0.0: version "1.0.2" resolved "https://registry.yarnpkg.com/balanced-match/-/balanced-match-1.0.2.tgz#e83e3a7e3f300b34cb9d87f615fa0cbf357690ee" integrity sha512-3oSeUO0TMV67hN1AmbXsK4yaqU7tjiHlbxRDZOpH0KW9+CeX4bRAaX0Anxt0tx2MrpRpWwQaPwIlISEJhYU5Pw== blessed@^0.1.81: version "0.1.81" resolved "https://registry.yarnpkg.com/blessed/-/blessed-0.1.81.tgz#f962d687ec2c369570ae71af843256e6d0ca1129" integrity sha1-+WLWh+wsNpVwrnGvhDJW5tDKESk= brace-expansion@^1.1.7: version "1.1.11" resolved "https://registry.yarnpkg.com/brace-expansion/-/brace-expansion-1.1.11.tgz#3c7fcbf529d87226f3d2f52b966ff5271eb441dd" integrity sha512-iCuPHDFgrHX7H2vEI/5xpz07zSHB00TpugqhmYtVmMO6518mCuRMoOYFldEBl0g187ufozdaHgWKcYFb61qGiA== dependencies: balanced-match "^1.0.0" concat-map "0.0.1" chalk@^4.1.2: version "4.1.2" resolved "https://registry.yarnpkg.com/chalk/-/chalk-4.1.2.tgz#aac4e2b7734a740867aeb16bf02aad556a1e7a01" integrity sha512-oKnbhFyRIXpUuez8iBMmyEa4nbj4IOQyuhc/wy9kY7/WVPcwIO9VA668Pu8RkO7+0G76SLROeyw9CpQ061i4mA== dependencies: ansi-styles "^4.1.0" supports-color "^7.1.0" color-convert@^2.0.1: version "2.0.1" resolved "https://registry.yarnpkg.com/color-convert/-/color-convert-2.0.1.tgz#72d3a68d598c9bdb3af2ad1e84f21d896abd4de3" integrity sha512-RRECPsj7iu/xb5oKYcsFHSppFNnsj/52OVTRKb4zP5onXwVF3zVmmToNcOfGC+CRDpfK/U584fMg38ZHCaElKQ== dependencies: color-name "~1.1.4" color-name@~1.1.4: version "1.1.4" resolved "https://registry.yarnpkg.com/color-name/-/color-name-1.1.4.tgz#c2a09a87acbde69543de6f63fa3995c826c536a2" integrity sha512-dOy+3AuW3a2wNbZHIuMZpTcgjGuLU/uBL/ubcZF9OXbDo8ff4O8yVp5Bf0efS8uEoYo5q4Fx7dY9OgQGXgAsQA== concat-map@0.0.1: version "0.0.1" resolved "https://registry.yarnpkg.com/concat-map/-/concat-map-0.0.1.tgz#d8a96bd77fd68df7793a73036a3ba0d5405d477b" integrity sha1-2Klr13/Wjfd5OnMDajug1UBdR3s= es6-promisify@^6.1.1: version "6.1.1" resolved "https://registry.yarnpkg.com/es6-promisify/-/es6-promisify-6.1.1.tgz#46837651b7b06bf6fff893d03f29393668d01621" integrity sha512-HBL8I3mIki5C1Cc9QjKUenHtnG0A5/xA8Q/AllRcfiwl2CZFXGK7ddBiCoRwAix4i2KxcQfjtIVcrVbB3vbmwg== es6-promisify@^7.0.0: version "7.0.0" resolved "https://registry.yarnpkg.com/es6-promisify/-/es6-promisify-7.0.0.tgz#9a710008dd6a4ab75a89e280bad787bfb749927b" integrity sha512-ginqzK3J90Rd4/Yz7qRrqUeIpe3TwSXTPPZtPne7tGBPeAaQiU8qt4fpKApnxHcq1AwtUdHVg5P77x/yrggG8Q== fastq@^1.13.0: version "1.13.0" resolved "https://registry.yarnpkg.com/fastq/-/fastq-1.13.0.tgz#616760f88a7526bdfc596b7cab8c18938c36b98c" integrity sha512-YpkpUnK8od0o1hmeSc7UUs/eB/vIPWJYjKck2QKIzAf71Vm1AAQ3EbuZB3g2JIy+pg+ERD0vqI79KyZiB2e2Nw== dependencies: reusify "^1.0.4" figlet@^1.5.2: version "1.5.2" resolved "https://registry.yarnpkg.com/figlet/-/figlet-1.5.2.tgz#dda34ff233c9a48e36fcff6741aeb5bafe49b634" integrity sha512-WOn21V8AhyE1QqVfPIVxe3tupJacq1xGkPTB4iagT6o+P2cAgEOOwIxMftr4+ZCTI6d551ij9j61DFr0nsP2uQ== file-uri-to-path@^2.0.0: version "2.0.0" resolved "https://registry.yarnpkg.com/file-uri-to-path/-/file-uri-to-path-2.0.0.tgz#7b415aeba227d575851e0a5b0c640d7656403fba" integrity sha512-hjPFI8oE/2iQPVe4gbrJ73Pp+Xfub2+WI2LlXDbsaJBwT5wuMh35WNWVYYTpnz895shtwfyutMFLFywpQAFdLg== fs.realpath@^1.0.0: version "1.0.0" resolved "https://registry.yarnpkg.com/fs.realpath/-/fs.realpath-1.0.0.tgz#1504ad2523158caa40db4a2787cb01411994ea4f" integrity sha1-FQStJSMVjKpA20onh8sBQRmU6k8= "gbffparser@http://git.t0m4.fr/Thomas/gbffParser.git": version "1.0.0" resolved "http://git.t0m4.fr/Thomas/gbffParser.git#ca352e37ced3e5cd61e1b369b78104b13d7a762e" dependencies: "@gmod/bgzf-filehandle" "^1.4.2" aligner "http://git.t0m4.fr/Thomas/aligner.git" blessed "^0.1.81" chalk "^4.1.2" figlet "^1.5.2" genbank-parser "^1.2.4" jsonata "^1.8.6" genbank-parser@^1.2.4: version "1.2.4" resolved "https://registry.yarnpkg.com/genbank-parser/-/genbank-parser-1.2.4.tgz#ee2f9c32f66875024af0c09ee0ec5e10fb231802" integrity sha512-r3pTgKHZx/rol90v2cezrNhfMhq3yHWCnBYyETNIJkvnJk+cwx/D/ZVgAy1SX8zwtnfvYQmFbqlpbh2f4t0h2w== generic-filehandle@^2.2.1: version "2.2.2" resolved "https://registry.yarnpkg.com/generic-filehandle/-/generic-filehandle-2.2.2.tgz#6493f4e8c0f9fc26d4086fbfa5d51879d0046f40" integrity sha512-/YRwruMy53YNTNISJa7YWYVCKqSUzx1v+17xi/bYFX9TjBKNm4otuXZ8eXXeaf4S48ncufU8ihmsvHoi0RzJHA== dependencies: es6-promisify "^6.1.1" file-uri-to-path "^2.0.0" glob@^7.2.0: version "7.2.0" resolved "https://registry.yarnpkg.com/glob/-/glob-7.2.0.tgz#d15535af7732e02e948f4c41628bd910293f6023" integrity sha512-lmLf6gtyrPq8tTjSmrO94wBeQbFR3HbLHbuyD69wuyQkImp2hWqMGB47OX65FBkPffO641IP9jWa1z4ivqG26Q== dependencies: fs.realpath "^1.0.0" inflight "^1.0.4" inherits "2" minimatch "^3.0.4" once "^1.3.0" path-is-absolute "^1.0.0" has-flag@^4.0.0: version "4.0.0" resolved "https://registry.yarnpkg.com/has-flag/-/has-flag-4.0.0.tgz#944771fd9c81c81265c4d6941860da06bb59479b" integrity sha512-EykJT/Q1KjTWctppgIAgfSO0tKVuZUjhgMr17kqTumMl6Afv3EISleU7qZUzoXDFTAHTDC4NOoG/ZxU3EvlMPQ== inflight@^1.0.4: version "1.0.6" resolved "https://registry.yarnpkg.com/inflight/-/inflight-1.0.6.tgz#49bd6331d7d02d0c09bc910a1075ba8165b56df9" integrity sha1-Sb1jMdfQLQwJvJEKEHW6gWW1bfk= dependencies: once "^1.3.0" wrappy "1" inherits@2: version "2.0.4" resolved "https://registry.yarnpkg.com/inherits/-/inherits-2.0.4.tgz#0fa2c64f932917c3433a0ded55363aae37416b7c" integrity sha512-k/vGaX4/Yla3WzyMCvTQOXYeIHvqOKtnqBduzTHpzpQZzAskKMhZ2K+EnBiSM9zGSoIFeMpXKxa4dYeZIQqewQ== jsonata@^1.8.6: version "1.8.6" resolved "https://registry.yarnpkg.com/jsonata/-/jsonata-1.8.6.tgz#e5f0e6ace870a34bac881a182ca2b31227122791" integrity sha512-ZH2TPYdNP2JecOl/HvrH47Xc+9imibEMQ4YqKy/F/FrM+2a6vfbGxeCX23dB9Fr6uvGwv+ghf1KxWB3iZk09wA== long@^5.1.0: version "5.2.0" resolved "https://registry.yarnpkg.com/long/-/long-5.2.0.tgz#2696dadf4b4da2ce3f6f6b89186085d94d52fd61" integrity sha512-9RTUNjK60eJbx3uz+TEGF7fUr29ZDxR5QzXcyDpeSfeH28S9ycINflOgOlppit5U+4kNTe83KQnMEerw7GmE8w== minimatch@^3.0.4: version "3.1.2" resolved "https://registry.yarnpkg.com/minimatch/-/minimatch-3.1.2.tgz#19cd194bfd3e428f049a70817c038d89ab4be35b" integrity sha512-J7p63hRiAjw1NDEww1W7i37+ByIrOWO5XQQAzZ3VOcL0PNybwpfmV/N05zFAzwQ9USyEcX6t3UO+K5aqBQOIHw== dependencies: brace-expansion "^1.1.7" once@^1.3.0: version "1.4.0" resolved "https://registry.yarnpkg.com/once/-/once-1.4.0.tgz#583b1aa775961d4b113ac17d9c50baef9dd76bd1" integrity sha1-WDsap3WWHUsROsF9nFC6753Xa9E= dependencies: wrappy "1" pako@^1.0.11: version "1.0.11" resolved "https://registry.yarnpkg.com/pako/-/pako-1.0.11.tgz#6c9599d340d54dfd3946380252a35705a6b992bf" integrity sha512-4hLB8Py4zZce5s4yd9XzopqwVv/yGNhV1Bl8NTmCq1763HeK2+EwVTv+leGeL13Dnh2wfbqowVPXCIO0z4taYw== path-is-absolute@^1.0.0: version "1.0.1" resolved "https://registry.yarnpkg.com/path-is-absolute/-/path-is-absolute-1.0.1.tgz#174b9268735534ffbc7ace6bf53a5a9e1b5c5f5f" integrity sha1-F0uSaHNVNP+8es5r9TpanhtcX18= reusify@^1.0.4: version "1.0.4" resolved "https://registry.yarnpkg.com/reusify/-/reusify-1.0.4.tgz#90da382b1e126efc02146e90845a88db12925d76" integrity sha512-U9nH88a3fc/ekCF1l0/UP1IosiuIjyTh7hBvXVMHYgVcfGvt897Xguj2UOLDeI5BG2m7/uwyaLVT6fbtCwTyzw== supports-color@^7.1.0: version "7.2.0" resolved "https://registry.yarnpkg.com/supports-color/-/supports-color-7.2.0.tgz#1b7dcdcb32b8138801b3e478ba6a51caa89648da" integrity sha512-qpCAvRl9stuOHveKsn7HncJRvv501qIacKzQlO/+Lwxc9+0q2wLyv4Dfvt80/DPn2pqOBsJdDiogXGR9+OvwRw== dependencies: has-flag "^4.0.0" typescript@^4.6.2: version "4.6.2" resolved "https://registry.yarnpkg.com/typescript/-/typescript-4.6.2.tgz#fe12d2727b708f4eef40f51598b3398baa9611d4" integrity sha512-HM/hFigTBHZhLXshn9sN37H085+hQGeJHJ/X7LpBWLID/fbc2acUMfU+lGD98X81sKP+pFa9f0DZmCwB9GnbAg== wrappy@1: version "1.0.2" resolved "https://registry.yarnpkg.com/wrappy/-/wrappy-1.0.2.tgz#b5243d8f3ec1aa35f1364605bc0d1036e30ab69f" integrity sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8=