|
|
@@ -408,13 +408,13 @@ impl Sam {
|
|
|
if is_reverse(flag) {
|
|
|
let len = ref_range.len();
|
|
|
ref_range.end = (ref_pos as usize) + 1;
|
|
|
- ref_range.start = ref_pos as usize + len - 2;
|
|
|
- query_range.end = query_range.end + 1;
|
|
|
- } else {
|
|
|
+ ref_range.start = ref_pos as usize + len - 1;
|
|
|
+ // query_range.end = query_range.end;
|
|
|
+ } else { // JUSTE
|
|
|
let len = ref_range.len();
|
|
|
ref_range.start = ref_pos as usize;
|
|
|
ref_range.end = (ref_pos as usize + len) - 1;
|
|
|
- query_range.end = query_range.end;
|
|
|
+ // query_range.end = query_range.end;
|
|
|
}
|
|
|
|
|
|
let ref_sequence = fa.get_sequence(&ref_name, ref_range.start.clone(), ref_range.end.clone());
|
