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@@ -1,5 +1,5 @@
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use anyhow::Result;
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-use std::{fmt, collections::{HashMap, VecDeque}};
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+use std::{fmt, collections::{HashMap, VecDeque, hash_map::Iter}};
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use log::info;
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use minimap2::Mapping;
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@@ -159,6 +159,9 @@ impl Genome {
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chromosomes: HashMap::new(),
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}
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}
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+ pub fn iter(&self) -> Iter<'_, String, Chromosome>{
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+ self.chromosomes.iter()
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+ }
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pub fn add_contig(&mut self, id: String, mappings: Vec<Mapping>) -> Result<()> {
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let mut new_contig = Contig { id, mappings };
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// get the category of Mapping
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