Upgrade rust-htslib to 1.0.0

Cargo.lock

@@ -112,7 +112,7 @@ dependencies = [
  "regex",
  "rustc-hash",
  "shlex",
- "syn 2.0.75",
+ "syn",
 ]
 
 [[package]]
@@ -125,7 +125,7 @@ dependencies = [
  "lazy_static",
  "regex",
  "strum_macros",
- "thiserror",
+ "thiserror 1.0.63",
 ]
 
 [[package]]
@@ -220,7 +220,7 @@ checksum = "45b1f4c00870f07dc34adcac82bb6a72cc5aabca8536ba1797e01df51d2ce9a0"
 dependencies = [
  "directories",
  "serde",
- "thiserror",
+ "thiserror 1.0.63",
  "toml",
 ]
 
@@ -281,9 +281,9 @@ dependencies = [
 
 [[package]]
 name = "curl-sys"
-version = "0.4.74+curl-8.9.0"
+version = "0.4.88+curl-8.20.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8af10b986114528fcdc4b63b6f5f021b7057618411046a4de2ba0f0149a097bf"
+checksum = "644816de6547255eff4e491a1dda1c19b7237f00b62a61e6e64859ce4f2906d0"
 dependencies = [
  "cc",
  "libc",
@@ -291,7 +291,7 @@ dependencies = [
  "openssl-sys",
  "pkg-config",
  "vcpkg",
- "windows-sys 0.52.0",
+ "windows-sys 0.59.0",
 ]
 
 [[package]]
@@ -302,24 +302,24 @@ checksum = "ef8ae57c4978a2acd8b869ce6b9ca1dfe817bff704c220209fdef2c0b75a01b9"
 
 [[package]]
 name = "derive-new"
-version = "0.5.9"
+version = "0.6.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3418329ca0ad70234b9735dc4ceed10af4df60eff9c8e7b06cb5e520d92c3535"
+checksum = "d150dea618e920167e5973d70ae6ece4385b7164e0d799fe7c122dd0a5d912ad"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 1.0.109",
+ "syn",
 ]
 
 [[package]]
 name = "derive-new"
-version = "0.6.0"
+version = "0.7.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d150dea618e920167e5973d70ae6ece4385b7164e0d799fe7c122dd0a5d912ad"
+checksum = "2cdc8d50f426189eef89dac62fabfa0abb27d5cc008f25bf4156a0203325becc"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.75",
+ "syn",
 ]
 
 [[package]]
@@ -455,9 +455,9 @@ checksum = "2304e00983f87ffb38b55b444b5e3b60a884b5d30c0fca7d82fe33449bbe55ea"
 
 [[package]]
 name = "hts-sys"
-version = "2.1.4"
+version = "2.2.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e9f348d14cb4e50444e39fcd6b00302fe2ed2bc88094142f6278391d349a386d"
+checksum = "e38d7f1c121cd22aa214cb4dadd4277dc5447391eac518b899b29ba6356fbbb2"
 dependencies = [
  "bindgen",
  "bzip2-sys",
@@ -721,7 +721,7 @@ dependencies = [
  "rust-htslib",
  "seq_io",
  "serde",
- "thiserror",
+ "thiserror 1.0.63",
  "uuid",
 ]
 
@@ -737,7 +737,7 @@ dependencies = [
  "num-format",
  "serde",
  "serde_json",
- "thiserror",
+ "thiserror 1.0.63",
 ]
 
 [[package]]
@@ -777,9 +777,9 @@ checksum = "d231b230927b5e4ad203db57bbcbee2802f6bce620b1e4a9024a07d94e2907ec"
 
 [[package]]
 name = "proc-macro2"
-version = "1.0.86"
+version = "1.0.106"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5e719e8df665df0d1c8fbfd238015744736151d4445ec0836b8e628aae103b77"
+checksum = "8fd00f0bb2e90d81d1044c2b32617f68fcb9fa3bb7640c23e9c748e53fb30934"
 dependencies = [
  "unicode-ident",
 ]
@@ -827,7 +827,7 @@ checksum = "ba009ff324d1fc1b900bd1fdb31564febe58a8ccc8a6fdbb93b543d33b13ca43"
 dependencies = [
  "getrandom",
  "libredox",
- "thiserror",
+ "thiserror 1.0.63",
 ]
 
 [[package]]
@@ -861,14 +861,14 @@ checksum = "7a66a03ae7c801facd77a29370b4faec201768915ac14a721ba36f20bc9c209b"
 
 [[package]]
 name = "rust-htslib"
-version = "0.47.0"
+version = "1.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "41f1796800e73ebb282c6fc5c03f1fe160e867e01114a58a7e115ee3c1d02482"
+checksum = "f22161678c3d72e6434c5f3383325dbf88c3cacce665f0c7b4b077fc6e957ba9"
 dependencies = [
  "bio-types",
  "byteorder",
  "custom_derive",
- "derive-new 0.5.9",
+ "derive-new 0.7.0",
  "hts-sys",
  "ieee754",
  "lazy_static",
@@ -877,7 +877,7 @@ dependencies = [
  "linear-map",
  "newtype_derive",
  "regex",
- "thiserror",
+ "thiserror 2.0.18",
  "url",
 ]
 
@@ -951,7 +951,7 @@ checksum = "a5831b979fd7b5439637af1752d535ff49f4860c0f341d1baeb6faf0f4242170"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.75",
+ "syn",
 ]
 
 [[package]]
@@ -999,7 +999,7 @@ checksum = "0eb01866308440fc64d6c44d9e86c5cc17adfe33c4d6eed55da9145044d0ffc1"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.75",
+ "syn",
 ]
 
 [[package]]
@@ -1012,14 +1012,14 @@ dependencies = [
  "proc-macro2",
  "quote",
  "rustversion",
- "syn 2.0.75",
+ "syn",
 ]
 
 [[package]]
 name = "syn"
-version = "1.0.109"
+version = "2.0.117"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "72b64191b275b66ffe2469e8af2c1cfe3bafa67b529ead792a6d0160888b4237"
+checksum = "e665b8803e7b1d2a727f4023456bbbbe74da67099c585258af0ad9c5013b9b99"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -1027,23 +1027,21 @@ dependencies = [
 ]
 
 [[package]]
-name = "syn"
-version = "2.0.75"
+name = "thiserror"
+version = "1.0.63"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f6af063034fc1935ede7be0122941bafa9bacb949334d090b77ca98b5817c7d9"
+checksum = "c0342370b38b6a11b6cc11d6a805569958d54cfa061a29969c3b5ce2ea405724"
 dependencies = [
- "proc-macro2",
- "quote",
- "unicode-ident",
+ "thiserror-impl 1.0.63",
 ]
 
 [[package]]
 name = "thiserror"
-version = "1.0.63"
+version = "2.0.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c0342370b38b6a11b6cc11d6a805569958d54cfa061a29969c3b5ce2ea405724"
+checksum = "4288b5bcbc7920c07a1149a35cf9590a2aa808e0bc1eafaade0b80947865fbc4"
 dependencies = [
- "thiserror-impl",
+ "thiserror-impl 2.0.18",
 ]
 
 [[package]]
@@ -1054,7 +1052,18 @@ checksum = "a4558b58466b9ad7ca0f102865eccc95938dca1a74a856f2b57b6629050da261"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.75",
+ "syn",
+]
+
+[[package]]
+name = "thiserror-impl"
+version = "2.0.18"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ebc4ee7f67670e9b64d05fa4253e753e016c6c95ff35b89b7941d6b856dec1d5"
+dependencies = [
+ "proc-macro2",
+ "quote",
+ "syn",
 ]
 
 [[package]]

Cargo.toml

@@ -8,7 +8,7 @@ log = "^0.4.22"
 env_logger = "^0.11.5"
 anyhow = "1.0.86"
 duct = "0.13.7"
-rust-htslib = "0.47.0"
+rust-htslib = "1.0.0"
 uuid = { version = "1.10.0", features = ["v4"] }
 pandora_lib_blastn = { git = "https://git.t0m4.fr/Thomas/pandora_lib_blastn.git" }
 pandora_lib_igv = { git = "https://git.t0m4.fr/Thomas/pandora_lib_igv.git" }