-lastz remap +bwa mem workin

Cargo.lock

@@ -259,9 +259,9 @@ checksum = "5ce89b21cab1437276d2650d57e971f9d548a2d9037cc231abdc0562b97498ce"
 
 [[package]]
 name = "bytemuck"
-version = "1.16.1"
+version = "1.16.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b236fc92302c97ed75b38da1f4917b5cdda4984745740f153a5d3059e48d725e"
+checksum = "102087e286b4677862ea56cf8fc58bb2cdfa8725c40ffb80fe3a008eb7f2fc83"
 
 [[package]]
 name = "byteorder"
@@ -271,9 +271,9 @@ checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"
 
 [[package]]
 name = "bytes"
-version = "1.6.1"
+version = "1.7.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a12916984aab3fa6e39d655a33e09c0071eb36d6ab3aea5c2d78551f1df6d952"
+checksum = "8318a53db07bb3f8dca91a600466bdb3f2eaadeedfdbcf02e1accbad9271ba50"
 
 [[package]]
 name = "bzip2-sys"
@@ -304,9 +304,9 @@ checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"
 
 [[package]]
 name = "clap"
-version = "4.5.11"
+version = "4.5.13"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "35723e6a11662c2afb578bcf0b88bf6ea8e21282a953428f240574fcc3a2b5b3"
+checksum = "0fbb260a053428790f3de475e304ff84cdbc4face759ea7a3e64c1edd938a7fc"
 dependencies = [
  "clap_builder",
  "clap_derive",
@@ -314,9 +314,9 @@ dependencies = [
 
 [[package]]
 name = "clap_builder"
-version = "4.5.11"
+version = "4.5.13"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "49eb96cbfa7cfa35017b7cd548c75b14c3118c98b423041d70562665e07fb0fa"
+checksum = "64b17d7ea74e9f833c7dbf2cbe4fb12ff26783eda4782a8975b72f895c9b4d99"
 dependencies = [
  "anstream",
  "anstyle",
@@ -326,9 +326,9 @@ dependencies = [
 
 [[package]]
 name = "clap_derive"
-version = "4.5.11"
+version = "4.5.13"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5d029b67f89d30bbb547c89fd5161293c0aec155fc691d7924b64550662db93e"
+checksum = "501d359d5f3dcaf6ecdeee48833ae73ec6e42723a1e52419c79abf9507eec0a0"
 dependencies = [
  "heck",
  "proc-macro2",
@@ -378,7 +378,7 @@ dependencies = [
  "directories 5.0.1",
  "serde",
  "thiserror",
- "toml 0.8.17",
+ "toml 0.8.19",
 ]
 
 [[package]]
@@ -813,9 +813,9 @@ checksum = "0ce7134b9999ecaf8bcd65542e436736ef32ddca1b3e06094cb6ec5755203b80"
 
 [[package]]
 name = "flate2"
-version = "1.0.30"
+version = "1.0.31"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5f54427cfd1c7829e2a139fcefea601bf088ebca651d2bf53ebc600eac295dae"
+checksum = "7f211bbe8e69bbd0cfdea405084f128ae8b4aaa6b0b522fc8f2b009084797920"
 dependencies = [
  "crc32fast",
  "miniz_oxide",
@@ -1149,9 +1149,9 @@ checksum = "9007da9cacbd3e6343da136e98b0d2df013f553d35bdec8b518f07bea768e19c"
 
 [[package]]
 name = "indexmap"
-version = "2.2.6"
+version = "2.3.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "168fb715dda47215e360912c096649d23d58bf392ac62f73919e831745e40f26"
+checksum = "de3fc2e30ba82dd1b3911c8de1ffc143c74a914a14e99514d7637e3099df5ea0"
 dependencies = [
  "equivalent",
  "hashbrown",
@@ -1471,7 +1471,7 @@ checksum = "68354c5c6bd36d73ff3feceb05efa59b6acb7626617f4962be322a825e61f79a"
 [[package]]
 name = "minimap2"
 version = "0.1.20+minimap2.2.28"
-source = "git+https://github.com/jguhlin/minimap2-rs#2f7529952dd6245d03482e490eda73878cea3051"
+source = "git+https://github.com/jguhlin/minimap2-rs#6299e62d6dfd857ffc5fc7a2e5e8b248d417de4c"
 dependencies = [
  "libc",
  "minimap2-sys",
@@ -1984,12 +1984,12 @@ checksum = "04744f49eae99ab78e0d5c0b603ab218f515ea8cfe5a456d7629ad883a3b6e7d"
 
 [[package]]
 name = "os_pipe"
-version = "1.2.0"
+version = "1.2.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "29d73ba8daf8fac13b0501d1abeddcfe21ba7401ada61a819144b6c2a4f32209"
+checksum = "5ffd2b0a5634335b135d5728d84c5e0fd726954b87111f7506a61c502280d982"
 dependencies = [
  "libc",
- "windows-sys 0.52.0",
+ "windows-sys 0.59.0",
 ]
 
 [[package]]
@@ -2023,7 +2023,7 @@ dependencies = [
 [[package]]
 name = "pandora_lib_blastn"
 version = "0.1.0"
-source = "git+https://git.t0m4.fr/Thomas/pandora_lib_blastn.git#516523739733c85e09276ede7375145662aa88a5"
+source = "git+https://git.t0m4.fr/Thomas/pandora_lib_blastn.git#7047167854d947e55fe836ccb9a2258af9c8c3ec"
 dependencies = [
  "anyhow",
  "confy 0.6.1",
@@ -2031,6 +2031,7 @@ dependencies = [
  "env_logger 0.10.2",
  "log",
  "minimap2",
+ "num-format",
  "serde",
  "serde_json",
  "thiserror",
@@ -2164,12 +2165,11 @@ dependencies = [
 
 [[package]]
 name = "ppv-lite86"
-version = "0.2.19"
+version = "0.2.20"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "2288c0e17cc8d342c712bb43a257a80ebffce59cdb33d5000d8348f3ec02528b"
+checksum = "77957b295656769bb8ad2b6a6b09d897d94f05c41b069aede1fcdaa675eaea04"
 dependencies = [
  "zerocopy",
- "zerocopy-derive",
 ]
 
 [[package]]
@@ -2322,9 +2322,9 @@ dependencies = [
 
 [[package]]
 name = "regex"
-version = "1.10.5"
+version = "1.10.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b91213439dad192326a0d7c6ee3955910425f441d7038e0d6933b0aec5c4517f"
+checksum = "4219d74c6b67a3654a9fbebc4b419e22126d13d2f3c4a07ee0cb61ff79a79619"
 dependencies = [
  "aho-corasick",
  "memchr",
@@ -2531,9 +2531,9 @@ dependencies = [
 
 [[package]]
 name = "rustls-pemfile"
-version = "2.1.2"
+version = "2.1.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "29993a25686778eb88d4189742cd713c9bce943bc54251a33509dc63cbacf73d"
+checksum = "196fe16b00e106300d3e45ecfcb764fa292a535d7326a29a5875c579c7417425"
 dependencies = [
  "base64",
  "rustls-pki-types",
@@ -2663,9 +2663,9 @@ dependencies = [
 
 [[package]]
 name = "serde_json"
-version = "1.0.121"
+version = "1.0.122"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4ab380d7d9f22ef3f21ad3e6c1ebe8e4fc7a2000ccba2e4d71fc96f15b2cb609"
+checksum = "784b6203951c57ff748476b126ccb5e8e2959a5c19e5c617ab1956be3dbc68da"
 dependencies = [
  "itoa",
  "memchr",
@@ -2727,12 +2727,12 @@ dependencies = [
 
 [[package]]
 name = "shared_child"
-version = "1.0.0"
+version = "1.0.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b0d94659ad3c2137fef23ae75b03d5241d633f8acded53d672decfa0e6e0caef"
+checksum = "09fa9338aed9a1df411814a5b2252f7cd206c55ae9bf2fa763f8de84603aa60c"
 dependencies = [
  "libc",
- "winapi",
+ "windows-sys 0.59.0",
 ]
 
 [[package]]
@@ -2906,12 +2906,13 @@ dependencies = [
 
 [[package]]
 name = "tempfile"
-version = "3.10.1"
+version = "3.11.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "85b77fafb263dd9d05cbeac119526425676db3784113aa9295c88498cbf8bff1"
+checksum = "b8fcd239983515c23a32fb82099f97d0b11b8c72f654ed659363a95c3dad7a53"
 dependencies = [
  "cfg-if",
  "fastrand",
+ "once_cell",
  "rustix",
  "windows-sys 0.52.0",
 ]
@@ -3088,9 +3089,9 @@ dependencies = [
 
 [[package]]
 name = "toml"
-version = "0.8.17"
+version = "0.8.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7a44eede9b727419af8095cb2d72fab15487a541f54647ad4414b34096ee4631"
+checksum = "a1ed1f98e3fdc28d6d910e6737ae6ab1a93bf1985935a1193e68f93eeb68d24e"
 dependencies = [
  "serde",
  "serde_spanned",
@@ -3109,9 +3110,9 @@ dependencies = [
 
 [[package]]
 name = "toml_edit"
-version = "0.22.18"
+version = "0.22.20"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1490595c74d930da779e944f5ba2ecdf538af67df1a9848cbd156af43c1b7cf0"
+checksum = "583c44c02ad26b0c3f3066fe629275e50627026c51ac2e595cca4c230ce1ce1d"
 dependencies = [
  "indexmap",
  "serde",
@@ -3414,11 +3415,11 @@ checksum = "ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6"
 
 [[package]]
 name = "winapi-util"
-version = "0.1.8"
+version = "0.1.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4d4cc384e1e73b93bafa6fb4f1df8c41695c8a91cf9c4c64358067d15a7b6c6b"
+checksum = "cf221c93e13a30d793f7645a0e7762c55d169dbb0a49671918a2319d289b10bb"
 dependencies = [
- "windows-sys 0.52.0",
+ "windows-sys 0.59.0",
 ]
 
 [[package]]
@@ -3445,6 +3446,15 @@ dependencies = [
  "windows-targets 0.52.6",
 ]
 
+[[package]]
+name = "windows-sys"
+version = "0.59.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1e38bc4d79ed67fd075bcc251a1c39b32a1776bbe92e5bef1f0bf1f8c531853b"
+dependencies = [
+ "windows-targets 0.52.6",
+]
+
 [[package]]
 name = "windows-targets"
 version = "0.48.5"
@@ -3568,9 +3578,9 @@ checksum = "589f6da84c646204747d1270a2a5661ea66ed1cced2631d546fdfb155959f9ec"
 
 [[package]]
 name = "winnow"
-version = "0.6.16"
+version = "0.6.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b480ae9340fc261e6be3e95a1ba86d54ae3f9171132a73ce8d4bbaf68339507c"
+checksum = "68a9bda4691f099d435ad181000724da8e5899daa10713c2d432552b9ccd3a6f"
 dependencies = [
  "memchr",
 ]