[package]
name = "pandora_lib_assembler"
version = "0.1.0"
edition = "2021"

[dependencies]
log = "^0.4.22"
env_logger = "^0.11.5"
anyhow = "1.0.86"
duct = "0.13.7"
noodles-fasta = "0.41.0"
noodles-fastq = "0.13.0"
rust-htslib = "0.46.0"
uuid = { version = "1.10.0", features = ["v4"] }
pandora_lib_blastn = { git = "https://git.t0m4.fr/Thomas/pandora_lib_blastn.git" }
pandora_lib_igv = { git = "https://git.t0m4.fr/Thomas/pandora_lib_igv.git" }
nom = "7.1.3"
petgraph = "0.6.5"
bam = "0.1.4"
flate2 = "1.0.30"
glob = "0.3.1"
regex = "1.10.5"