[package]
name = "pandora_lib_assembler"
version = "0.1.0"
edition = "2021"

[dependencies]
log = "^0.4.22"
env_logger = "^0.11.5"
anyhow = "1.0.86"
duct = "0.13.7"
rust-htslib = "0.47.0"
uuid = { version = "1.10.0", features = ["v4"] }
pandora_lib_blastn = { git = "https://git.t0m4.fr/Thomas/pandora_lib_blastn.git" }
pandora_lib_igv = { git = "https://git.t0m4.fr/Thomas/pandora_lib_igv.git" }
nom = "7.1.3"
petgraph = "0.6.5"
bam = "0.1.4"
flate2 = "1.0.33"
glob = "0.3.1"
regex = "1.10.6"
rayon = "1.10.0"
csv = "1.3.0"
serde = { version = "1.0.209", features = ["derive"] }
thiserror = "1.0.63"
seq_io = "0.3.2"
# rust-spoa = "0.2.4"