| 12345678910111213141516171819202122232425262728293031323334353637383940414243444546474849505152535455565758596061626364656667686970717273747576777879808182838485868788899091929394959697989910010110210310410510610710810911011111211311411511611711811912012112212312412512612712812913013113213313413513613713813914014114214314414514614714814915015115215315415515615715815916016116216316416516616716816917017117217317417517617717817918018118218318418518618718818919019119219319419519619719819920020120220320420520620720820921021121221321421521621721821922022122222322422522622722822923023123223323423523623723823924024124224324424524624724824925025125225325425525625725825926026126226326426526626726826927027127227327427527627727827928028128228328428528628728828929029129229329429529629729829930030130230330430530630730830931031131231331431531631731831932032132232332432532632732832933033133233333433533633733833934034134234334434534634734834935035135235335435535635735835936036136236336436536636736836937037137237337437537637737837938038138238338438538638738838939039139239339439539639739839940040140240340440540640740840941041141241341441541641741841942042142242342442542642742842943043143243343443543643743843944044144244344444544644744844945045145245345445545645745845946046146246346446546646746846947047147247347447547647747847948048148248348448548648748848949049149249349449549649749849950050150250350450550650750850951051151251351451551651751851952052152252352452552652752852953053153253353453553653753853954054154254354454554654754854955055155255355455555655755855956056156256356456556656756856957057157257357457557657757857958058158258358458558658758858959059159259359459559659759859960060160260360460560660760860961061161261361461561661761861962062162262362462562662762862963063163263363463563663763863964064164264364464564664764864965065165265365465565665765865966066166266366466566666766866967067167267367467567667767867968068168268368468568668768868969069169269369469569669769869970070170270370470570670770870971071171271371471571671771871972072172272372472572672772872973073173273373473573673773873974074174274374474574674774874975075175275375475575675775875976076176276376476576676776876977077177277377477577677777877978078178278378478578678778878979079179279379479579679779879980080180280380480580680780880981081181281381481581681781881982082182282382482582682782882983083183283383483583683783883984084184284384484584684784884985085185285385485585685785885986086186286386486586686786886987087187287387487587687787887988088188288388488588688788888989089189289389489589689789889990090190290390490590690790890991091191291391491591691791891992092192292392492592692792892993093193293393493593693793893994094194294394494594694794894995095195295395495595695795895996096196296396496596696796896997097197297397497597697797897998098198298398498598698798898999099199299399499599699799899910001001100210031004100510061007100810091010101110121013101410151016101710181019102010211022102310241025102610271028102910301031103210331034103510361037103810391040104110421043104410451046104710481049105010511052105310541055105610571058105910601061106210631064106510661067106810691070107110721073107410751076107710781079108010811082108310841085108610871088108910901091109210931094109510961097109810991100110111021103110411051106110711081109111011111112111311141115111611171118111911201121112211231124112511261127112811291130113111321133113411351136113711381139114011411142114311441145114611471148114911501151115211531154115511561157115811591160116111621163116411651166116711681169117011711172117311741175117611771178117911801181118211831184118511861187118811891190119111921193119411951196119711981199120012011202120312041205120612071208120912101211121212131214121512161217121812191220122112221223122412251226122712281229123012311232123312341235123612371238123912401241124212431244124512461247124812491250125112521253125412551256125712581259126012611262126312641265126612671268126912701271127212731274127512761277127812791280128112821283128412851286128712881289 |
- # This file is automatically @generated by Cargo.
- # It is not intended for manual editing.
- version = 3
- [[package]]
- name = "adler2"
- version = "2.0.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "512761e0bb2578dd7380c6baaa0f4ce03e84f95e960231d1dec8bf4d7d6e2627"
- [[package]]
- name = "aho-corasick"
- version = "1.1.3"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "8e60d3430d3a69478ad0993f19238d2df97c507009a52b3c10addcd7f6bcb916"
- dependencies = [
- "memchr",
- ]
- [[package]]
- name = "anstream"
- version = "0.6.15"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "64e15c1ab1f89faffbf04a634d5e1962e9074f2741eef6d97f3c4e322426d526"
- dependencies = [
- "anstyle",
- "anstyle-parse",
- "anstyle-query",
- "anstyle-wincon",
- "colorchoice",
- "is_terminal_polyfill",
- "utf8parse",
- ]
- [[package]]
- name = "anstyle"
- version = "1.0.8"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "1bec1de6f59aedf83baf9ff929c98f2ad654b97c9510f4e70cf6f661d49fd5b1"
- [[package]]
- name = "anstyle-parse"
- version = "0.2.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "eb47de1e80c2b463c735db5b217a0ddc39d612e7ac9e2e96a5aed1f57616c1cb"
- dependencies = [
- "utf8parse",
- ]
- [[package]]
- name = "anstyle-query"
- version = "1.1.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "6d36fc52c7f6c869915e99412912f22093507da8d9e942ceaf66fe4b7c14422a"
- dependencies = [
- "windows-sys 0.52.0",
- ]
- [[package]]
- name = "anstyle-wincon"
- version = "3.0.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "5bf74e1b6e971609db8ca7a9ce79fd5768ab6ae46441c572e46cf596f59e57f8"
- dependencies = [
- "anstyle",
- "windows-sys 0.52.0",
- ]
- [[package]]
- name = "anyhow"
- version = "1.0.86"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "b3d1d046238990b9cf5bcde22a3fb3584ee5cf65fb2765f454ed428c7a0063da"
- [[package]]
- name = "arrayvec"
- version = "0.7.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "7c02d123df017efcdfbd739ef81735b36c5ba83ec3c59c80a9d7ecc718f92e50"
- [[package]]
- name = "bam"
- version = "0.1.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "109918ba142fc1d2e67a4fead8b0a8bfb6370fa50559baf0c024de46dcafce0d"
- dependencies = [
- "byteorder",
- "crc32fast",
- "flate2",
- ]
- [[package]]
- name = "base64"
- version = "0.22.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "72b3254f16251a8381aa12e40e3c4d2f0199f8c6508fbecb9d91f575e0fbb8c6"
- [[package]]
- name = "bio-types"
- version = "1.0.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "f4dcf54f8b7f51450207d54780bab09c05f30b8b0caa991545082842e466ad7e"
- dependencies = [
- "derive-new 0.6.0",
- "lazy_static",
- "regex",
- "strum_macros",
- "thiserror",
- ]
- [[package]]
- name = "bitflags"
- version = "2.6.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "b048fb63fd8b5923fc5aa7b340d8e156aec7ec02f0c78fa8a6ddc2613f6f71de"
- [[package]]
- name = "bstr"
- version = "1.10.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "40723b8fb387abc38f4f4a37c09073622e41dd12327033091ef8950659e6dc0c"
- dependencies = [
- "memchr",
- "serde",
- ]
- [[package]]
- name = "byteorder"
- version = "1.5.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"
- [[package]]
- name = "bytes"
- version = "1.7.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "8318a53db07bb3f8dca91a600466bdb3f2eaadeedfdbcf02e1accbad9271ba50"
- [[package]]
- name = "bzip2-sys"
- version = "0.1.11+1.0.8"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "736a955f3fa7875102d57c82b8cac37ec45224a07fd32d58f9f7a186b6cd4cdc"
- dependencies = [
- "cc",
- "libc",
- "pkg-config",
- ]
- [[package]]
- name = "cc"
- version = "1.1.13"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "72db2f7947ecee9b03b510377e8bb9077afa27176fdbff55c51027e976fdcc48"
- dependencies = [
- "jobserver",
- "libc",
- "shlex",
- ]
- [[package]]
- name = "cfg-if"
- version = "1.0.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"
- [[package]]
- name = "cmake"
- version = "0.1.51"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "fb1e43aa7fd152b1f968787f7dbcdeb306d1867ff373c69955211876c053f91a"
- dependencies = [
- "cc",
- ]
- [[package]]
- name = "colorchoice"
- version = "1.0.2"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d3fd119d74b830634cea2a0f58bbd0d54540518a14397557951e79340abc28c0"
- [[package]]
- name = "confy"
- version = "0.6.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "45b1f4c00870f07dc34adcac82bb6a72cc5aabca8536ba1797e01df51d2ce9a0"
- dependencies = [
- "directories",
- "serde",
- "thiserror",
- "toml",
- ]
- [[package]]
- name = "crc32fast"
- version = "1.4.2"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a97769d94ddab943e4510d138150169a2758b5ef3eb191a9ee688de3e23ef7b3"
- dependencies = [
- "cfg-if",
- ]
- [[package]]
- name = "crossbeam-channel"
- version = "0.5.13"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "33480d6946193aa8033910124896ca395333cae7e2d1113d1fef6c3272217df2"
- dependencies = [
- "crossbeam-utils",
- ]
- [[package]]
- name = "crossbeam-deque"
- version = "0.8.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "613f8cc01fe9cf1a3eb3d7f488fd2fa8388403e97039e2f73692932e291a770d"
- dependencies = [
- "crossbeam-epoch",
- "crossbeam-utils",
- ]
- [[package]]
- name = "crossbeam-epoch"
- version = "0.9.18"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "5b82ac4a3c2ca9c3460964f020e1402edd5753411d7737aa39c3714ad1b5420e"
- dependencies = [
- "crossbeam-utils",
- ]
- [[package]]
- name = "crossbeam-utils"
- version = "0.8.20"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "22ec99545bb0ed0ea7bb9b8e1e9122ea386ff8a48c0922e43f36d45ab09e0e80"
- [[package]]
- name = "csv"
- version = "1.3.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "ac574ff4d437a7b5ad237ef331c17ccca63c46479e5b5453eb8e10bb99a759fe"
- dependencies = [
- "csv-core",
- "itoa",
- "ryu",
- "serde",
- ]
- [[package]]
- name = "csv-core"
- version = "0.1.11"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "5efa2b3d7902f4b634a20cae3c9c4e6209dc4779feb6863329607560143efa70"
- dependencies = [
- "memchr",
- ]
- [[package]]
- name = "curl-sys"
- version = "0.4.74+curl-8.9.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "8af10b986114528fcdc4b63b6f5f021b7057618411046a4de2ba0f0149a097bf"
- dependencies = [
- "cc",
- "libc",
- "libz-sys",
- "openssl-sys",
- "pkg-config",
- "vcpkg",
- "windows-sys 0.52.0",
- ]
- [[package]]
- name = "custom_derive"
- version = "0.1.7"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "ef8ae57c4978a2acd8b869ce6b9ca1dfe817bff704c220209fdef2c0b75a01b9"
- [[package]]
- name = "derive-new"
- version = "0.5.9"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "3418329ca0ad70234b9735dc4ceed10af4df60eff9c8e7b06cb5e520d92c3535"
- dependencies = [
- "proc-macro2",
- "quote",
- "syn 1.0.109",
- ]
- [[package]]
- name = "derive-new"
- version = "0.6.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d150dea618e920167e5973d70ae6ece4385b7164e0d799fe7c122dd0a5d912ad"
- dependencies = [
- "proc-macro2",
- "quote",
- "syn 2.0.75",
- ]
- [[package]]
- name = "directories"
- version = "5.0.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "9a49173b84e034382284f27f1af4dcbbd231ffa358c0fe316541a7337f376a35"
- dependencies = [
- "dirs-sys",
- ]
- [[package]]
- name = "dirs-sys"
- version = "0.4.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "520f05a5cbd335fae5a99ff7a6ab8627577660ee5cfd6a94a6a929b52ff0321c"
- dependencies = [
- "libc",
- "option-ext",
- "redox_users",
- "windows-sys 0.48.0",
- ]
- [[package]]
- name = "duct"
- version = "0.13.7"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "e4ab5718d1224b63252cd0c6f74f6480f9ffeb117438a2e0f5cf6d9a4798929c"
- dependencies = [
- "libc",
- "once_cell",
- "os_pipe",
- "shared_child",
- ]
- [[package]]
- name = "either"
- version = "1.13.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "60b1af1c220855b6ceac025d3f6ecdd2b7c4894bfe9cd9bda4fbb4bc7c0d4cf0"
- [[package]]
- name = "env_filter"
- version = "0.1.2"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "4f2c92ceda6ceec50f43169f9ee8424fe2db276791afde7b2cd8bc084cb376ab"
- dependencies = [
- "log",
- "regex",
- ]
- [[package]]
- name = "env_logger"
- version = "0.11.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "e13fa619b91fb2381732789fc5de83b45675e882f66623b7d8cb4f643017018d"
- dependencies = [
- "anstream",
- "anstyle",
- "env_filter",
- "humantime",
- "log",
- ]
- [[package]]
- name = "equivalent"
- version = "1.0.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "5443807d6dff69373d433ab9ef5378ad8df50ca6298caf15de6e52e24aaf54d5"
- [[package]]
- name = "fixedbitset"
- version = "0.4.2"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "0ce7134b9999ecaf8bcd65542e436736ef32ddca1b3e06094cb6ec5755203b80"
- [[package]]
- name = "flate2"
- version = "1.0.32"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "9c0596c1eac1f9e04ed902702e9878208b336edc9d6fddc8a48387349bab3666"
- dependencies = [
- "crc32fast",
- "miniz_oxide",
- ]
- [[package]]
- name = "form_urlencoded"
- version = "1.2.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "e13624c2627564efccf4934284bdd98cbaa14e79b0b5a141218e507b3a823456"
- dependencies = [
- "percent-encoding",
- ]
- [[package]]
- name = "fs-utils"
- version = "1.1.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "6fc7a9dc005c944c98a935e7fd626faf5bf7e5a609f94bc13e42fc4a02e52593"
- dependencies = [
- "quick-error",
- ]
- [[package]]
- name = "getrandom"
- version = "0.2.15"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "c4567c8db10ae91089c99af84c68c38da3ec2f087c3f82960bcdbf3656b6f4d7"
- dependencies = [
- "cfg-if",
- "libc",
- "wasi",
- ]
- [[package]]
- name = "glob"
- version = "0.3.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d2fabcfbdc87f4758337ca535fb41a6d701b65693ce38287d856d1674551ec9b"
- [[package]]
- name = "hashbrown"
- version = "0.14.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "e5274423e17b7c9fc20b6e7e208532f9b19825d82dfd615708b70edd83df41f1"
- [[package]]
- name = "heck"
- version = "0.5.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "2304e00983f87ffb38b55b444b5e3b60a884b5d30c0fca7d82fe33449bbe55ea"
- [[package]]
- name = "hts-sys"
- version = "2.1.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "e9f348d14cb4e50444e39fcd6b00302fe2ed2bc88094142f6278391d349a386d"
- dependencies = [
- "bzip2-sys",
- "cc",
- "curl-sys",
- "fs-utils",
- "glob",
- "libz-sys",
- "lzma-sys",
- "openssl-sys",
- ]
- [[package]]
- name = "humantime"
- version = "2.1.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "9a3a5bfb195931eeb336b2a7b4d761daec841b97f947d34394601737a7bba5e4"
- [[package]]
- name = "idna"
- version = "0.5.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "634d9b1461af396cad843f47fdba5597a4f9e6ddd4bfb6ff5d85028c25cb12f6"
- dependencies = [
- "unicode-bidi",
- "unicode-normalization",
- ]
- [[package]]
- name = "ieee754"
- version = "0.2.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "9007da9cacbd3e6343da136e98b0d2df013f553d35bdec8b518f07bea768e19c"
- [[package]]
- name = "indexmap"
- version = "2.4.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "93ead53efc7ea8ed3cfb0c79fc8023fbb782a5432b52830b6518941cebe6505c"
- dependencies = [
- "equivalent",
- "hashbrown",
- ]
- [[package]]
- name = "is_terminal_polyfill"
- version = "1.70.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "7943c866cc5cd64cbc25b2e01621d07fa8eb2a1a23160ee81ce38704e97b8ecf"
- [[package]]
- name = "itoa"
- version = "1.0.11"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "49f1f14873335454500d59611f1cf4a4b0f786f9ac11f4312a78e4cf2566695b"
- [[package]]
- name = "jobserver"
- version = "0.1.32"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "48d1dbcbbeb6a7fec7e059840aa538bd62aaccf972c7346c4d9d2059312853d0"
- dependencies = [
- "libc",
- ]
- [[package]]
- name = "lazy_static"
- version = "1.5.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "bbd2bcb4c963f2ddae06a2efc7e9f3591312473c50c6685e1f298068316e66fe"
- [[package]]
- name = "libc"
- version = "0.2.158"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d8adc4bb1803a324070e64a98ae98f38934d91957a99cfb3a43dcbc01bc56439"
- [[package]]
- name = "libredox"
- version = "0.1.3"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "c0ff37bd590ca25063e35af745c343cb7a0271906fb7b37e4813e8f79f00268d"
- dependencies = [
- "bitflags",
- "libc",
- ]
- [[package]]
- name = "libz-sys"
- version = "1.1.19"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "fdc53a7799a7496ebc9fd29f31f7df80e83c9bda5299768af5f9e59eeea74647"
- dependencies = [
- "cc",
- "cmake",
- "libc",
- "pkg-config",
- "vcpkg",
- ]
- [[package]]
- name = "linear-map"
- version = "1.2.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "bfae20f6b19ad527b550c223fddc3077a547fc70cda94b9b566575423fd303ee"
- [[package]]
- name = "log"
- version = "0.4.22"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a7a70ba024b9dc04c27ea2f0c0548feb474ec5c54bba33a7f72f873a39d07b24"
- [[package]]
- name = "lzma-sys"
- version = "0.1.20"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "5fda04ab3764e6cde78b9974eec4f779acaba7c4e84b36eca3cf77c581b85d27"
- dependencies = [
- "cc",
- "libc",
- "pkg-config",
- ]
- [[package]]
- name = "memchr"
- version = "2.7.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "78ca9ab1a0babb1e7d5695e3530886289c18cf2f87ec19a575a0abdce112e3a3"
- [[package]]
- name = "minimal-lexical"
- version = "0.2.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "68354c5c6bd36d73ff3feceb05efa59b6acb7626617f4962be322a825e61f79a"
- [[package]]
- name = "miniz_oxide"
- version = "0.8.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "e2d80299ef12ff69b16a84bb182e3b9df68b5a91574d3d4fa6e41b65deec4df1"
- dependencies = [
- "adler2",
- ]
- [[package]]
- name = "newtype_derive"
- version = "0.1.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "ac8cd24d9f185bb7223958d8c1ff7a961b74b1953fd05dba7cc568a63b3861ec"
- dependencies = [
- "rustc_version",
- ]
- [[package]]
- name = "nom"
- version = "7.1.3"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d273983c5a657a70a3e8f2a01329822f3b8c8172b73826411a55751e404a0a4a"
- dependencies = [
- "memchr",
- "minimal-lexical",
- ]
- [[package]]
- name = "noodles-bgzf"
- version = "0.32.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "2b2fba0f4a64cc897d9396d730a0c444d148daed7de31ad5904ecc673178fc9d"
- dependencies = [
- "byteorder",
- "bytes",
- "crossbeam-channel",
- "flate2",
- ]
- [[package]]
- name = "noodles-core"
- version = "0.15.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "c5a8c6b020d1205abef2b0fab4463a6c5ecc3c8f4d561ca8b0d1a42323376200"
- dependencies = [
- "bstr",
- ]
- [[package]]
- name = "noodles-fasta"
- version = "0.41.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d7a1662ac3ace299515c982a322e378bbeb4c1bd90fb098d823ef0f3a6abcc00"
- dependencies = [
- "bstr",
- "bytes",
- "memchr",
- "noodles-bgzf",
- "noodles-core",
- ]
- [[package]]
- name = "noodles-fastq"
- version = "0.13.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "c1edf1f924acddeee36304c444e242b9bda52ef9383dc2d7f008fca190753207"
- dependencies = [
- "memchr",
- ]
- [[package]]
- name = "num-format"
- version = "0.4.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a652d9771a63711fd3c3deb670acfbe5c30a4072e664d7a3bf5a9e1056ac72c3"
- dependencies = [
- "arrayvec",
- "itoa",
- ]
- [[package]]
- name = "once_cell"
- version = "1.19.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "3fdb12b2476b595f9358c5161aa467c2438859caa136dec86c26fdd2efe17b92"
- [[package]]
- name = "openssl-src"
- version = "300.3.1+3.3.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "7259953d42a81bf137fbbd73bd30a8e1914d6dce43c2b90ed575783a22608b91"
- dependencies = [
- "cc",
- ]
- [[package]]
- name = "openssl-sys"
- version = "0.9.103"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "7f9e8deee91df40a943c71b917e5874b951d32a802526c85721ce3b776c929d6"
- dependencies = [
- "cc",
- "libc",
- "openssl-src",
- "pkg-config",
- "vcpkg",
- ]
- [[package]]
- name = "option-ext"
- version = "0.2.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "04744f49eae99ab78e0d5c0b603ab218f515ea8cfe5a456d7629ad883a3b6e7d"
- [[package]]
- name = "os_pipe"
- version = "1.2.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "5ffd2b0a5634335b135d5728d84c5e0fd726954b87111f7506a61c502280d982"
- dependencies = [
- "libc",
- "windows-sys 0.59.0",
- ]
- [[package]]
- name = "pandora_lib_assembler"
- version = "0.1.0"
- dependencies = [
- "anyhow",
- "bam",
- "csv",
- "duct",
- "env_logger",
- "flate2",
- "glob",
- "log",
- "nom",
- "noodles-fasta",
- "noodles-fastq",
- "pandora_lib_blastn",
- "pandora_lib_igv",
- "petgraph",
- "rayon",
- "regex",
- "rust-htslib",
- "uuid",
- ]
- [[package]]
- name = "pandora_lib_blastn"
- version = "0.1.0"
- source = "git+https://git.t0m4.fr/Thomas/pandora_lib_blastn.git#c6bf7f4e737d022bd22210f23808e690103962c5"
- dependencies = [
- "anyhow",
- "confy",
- "env_logger",
- "log",
- "num-format",
- "serde",
- "serde_json",
- "thiserror",
- ]
- [[package]]
- name = "pandora_lib_igv"
- version = "0.1.0"
- source = "git+https://git.t0m4.fr/Thomas/pandora_lib_igv.git#268f631dbe94132b8291f80864a8cbcef12e76ad"
- dependencies = [
- "anyhow",
- "base64",
- "flate2",
- "serde",
- "serde_json",
- "smart-default",
- ]
- [[package]]
- name = "percent-encoding"
- version = "2.3.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "e3148f5046208a5d56bcfc03053e3ca6334e51da8dfb19b6cdc8b306fae3283e"
- [[package]]
- name = "petgraph"
- version = "0.6.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "b4c5cc86750666a3ed20bdaf5ca2a0344f9c67674cae0515bec2da16fbaa47db"
- dependencies = [
- "fixedbitset",
- "indexmap",
- ]
- [[package]]
- name = "pkg-config"
- version = "0.3.30"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d231b230927b5e4ad203db57bbcbee2802f6bce620b1e4a9024a07d94e2907ec"
- [[package]]
- name = "proc-macro2"
- version = "1.0.86"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "5e719e8df665df0d1c8fbfd238015744736151d4445ec0836b8e628aae103b77"
- dependencies = [
- "unicode-ident",
- ]
- [[package]]
- name = "quick-error"
- version = "1.2.3"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a1d01941d82fa2ab50be1e79e6714289dd7cde78eba4c074bc5a4374f650dfe0"
- [[package]]
- name = "quote"
- version = "1.0.36"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "0fa76aaf39101c457836aec0ce2316dbdc3ab723cdda1c6bd4e6ad4208acaca7"
- dependencies = [
- "proc-macro2",
- ]
- [[package]]
- name = "rayon"
- version = "1.10.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "b418a60154510ca1a002a752ca9714984e21e4241e804d32555251faf8b78ffa"
- dependencies = [
- "either",
- "rayon-core",
- ]
- [[package]]
- name = "rayon-core"
- version = "1.12.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "1465873a3dfdaa8ae7cb14b4383657caab0b3e8a0aa9ae8e04b044854c8dfce2"
- dependencies = [
- "crossbeam-deque",
- "crossbeam-utils",
- ]
- [[package]]
- name = "redox_users"
- version = "0.4.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "ba009ff324d1fc1b900bd1fdb31564febe58a8ccc8a6fdbb93b543d33b13ca43"
- dependencies = [
- "getrandom",
- "libredox",
- "thiserror",
- ]
- [[package]]
- name = "regex"
- version = "1.10.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "4219d74c6b67a3654a9fbebc4b419e22126d13d2f3c4a07ee0cb61ff79a79619"
- dependencies = [
- "aho-corasick",
- "memchr",
- "regex-automata",
- "regex-syntax",
- ]
- [[package]]
- name = "regex-automata"
- version = "0.4.7"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "38caf58cc5ef2fed281f89292ef23f6365465ed9a41b7a7754eb4e26496c92df"
- dependencies = [
- "aho-corasick",
- "memchr",
- "regex-syntax",
- ]
- [[package]]
- name = "regex-syntax"
- version = "0.8.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "7a66a03ae7c801facd77a29370b4faec201768915ac14a721ba36f20bc9c209b"
- [[package]]
- name = "rust-htslib"
- version = "0.46.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "aec6f9ca4601beb4ae75ff8c99144dd15de5a873f6adf058da299962c760968e"
- dependencies = [
- "bio-types",
- "byteorder",
- "custom_derive",
- "derive-new 0.5.9",
- "hts-sys",
- "ieee754",
- "lazy_static",
- "libc",
- "libz-sys",
- "linear-map",
- "newtype_derive",
- "regex",
- "thiserror",
- "url",
- ]
- [[package]]
- name = "rustc_version"
- version = "0.1.7"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "c5f5376ea5e30ce23c03eb77cbe4962b988deead10910c372b226388b594c084"
- dependencies = [
- "semver",
- ]
- [[package]]
- name = "rustversion"
- version = "1.0.17"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "955d28af4278de8121b7ebeb796b6a45735dc01436d898801014aced2773a3d6"
- [[package]]
- name = "ryu"
- version = "1.0.18"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "f3cb5ba0dc43242ce17de99c180e96db90b235b8a9fdc9543c96d2209116bd9f"
- [[package]]
- name = "semver"
- version = "0.1.20"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "d4f410fedcf71af0345d7607d246e7ad15faaadd49d240ee3b24e5dc21a820ac"
- [[package]]
- name = "serde"
- version = "1.0.208"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "cff085d2cb684faa248efb494c39b68e522822ac0de72ccf08109abde717cfb2"
- dependencies = [
- "serde_derive",
- ]
- [[package]]
- name = "serde_derive"
- version = "1.0.208"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "24008e81ff7613ed8e5ba0cfaf24e2c2f1e5b8a0495711e44fcd4882fca62bcf"
- dependencies = [
- "proc-macro2",
- "quote",
- "syn 2.0.75",
- ]
- [[package]]
- name = "serde_json"
- version = "1.0.125"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "83c8e735a073ccf5be70aa8066aa984eaf2fa000db6c8d0100ae605b366d31ed"
- dependencies = [
- "itoa",
- "memchr",
- "ryu",
- "serde",
- ]
- [[package]]
- name = "serde_spanned"
- version = "0.6.7"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "eb5b1b31579f3811bf615c144393417496f152e12ac8b7663bf664f4a815306d"
- dependencies = [
- "serde",
- ]
- [[package]]
- name = "shared_child"
- version = "1.0.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "09fa9338aed9a1df411814a5b2252f7cd206c55ae9bf2fa763f8de84603aa60c"
- dependencies = [
- "libc",
- "windows-sys 0.59.0",
- ]
- [[package]]
- name = "shlex"
- version = "1.3.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "0fda2ff0d084019ba4d7c6f371c95d8fd75ce3524c3cb8fb653a3023f6323e64"
- [[package]]
- name = "smart-default"
- version = "0.7.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "0eb01866308440fc64d6c44d9e86c5cc17adfe33c4d6eed55da9145044d0ffc1"
- dependencies = [
- "proc-macro2",
- "quote",
- "syn 2.0.75",
- ]
- [[package]]
- name = "strum_macros"
- version = "0.26.4"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "4c6bee85a5a24955dc440386795aa378cd9cf82acd5f764469152d2270e581be"
- dependencies = [
- "heck",
- "proc-macro2",
- "quote",
- "rustversion",
- "syn 2.0.75",
- ]
- [[package]]
- name = "syn"
- version = "1.0.109"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "72b64191b275b66ffe2469e8af2c1cfe3bafa67b529ead792a6d0160888b4237"
- dependencies = [
- "proc-macro2",
- "quote",
- "unicode-ident",
- ]
- [[package]]
- name = "syn"
- version = "2.0.75"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "f6af063034fc1935ede7be0122941bafa9bacb949334d090b77ca98b5817c7d9"
- dependencies = [
- "proc-macro2",
- "quote",
- "unicode-ident",
- ]
- [[package]]
- name = "thiserror"
- version = "1.0.63"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "c0342370b38b6a11b6cc11d6a805569958d54cfa061a29969c3b5ce2ea405724"
- dependencies = [
- "thiserror-impl",
- ]
- [[package]]
- name = "thiserror-impl"
- version = "1.0.63"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a4558b58466b9ad7ca0f102865eccc95938dca1a74a856f2b57b6629050da261"
- dependencies = [
- "proc-macro2",
- "quote",
- "syn 2.0.75",
- ]
- [[package]]
- name = "tinyvec"
- version = "1.8.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "445e881f4f6d382d5f27c034e25eb92edd7c784ceab92a0937db7f2e9471b938"
- dependencies = [
- "tinyvec_macros",
- ]
- [[package]]
- name = "tinyvec_macros"
- version = "0.1.1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "1f3ccbac311fea05f86f61904b462b55fb3df8837a366dfc601a0161d0532f20"
- [[package]]
- name = "toml"
- version = "0.8.19"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a1ed1f98e3fdc28d6d910e6737ae6ab1a93bf1985935a1193e68f93eeb68d24e"
- dependencies = [
- "serde",
- "serde_spanned",
- "toml_datetime",
- "toml_edit",
- ]
- [[package]]
- name = "toml_datetime"
- version = "0.6.8"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "0dd7358ecb8fc2f8d014bf86f6f638ce72ba252a2c3a2572f2a795f1d23efb41"
- dependencies = [
- "serde",
- ]
- [[package]]
- name = "toml_edit"
- version = "0.22.20"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "583c44c02ad26b0c3f3066fe629275e50627026c51ac2e595cca4c230ce1ce1d"
- dependencies = [
- "indexmap",
- "serde",
- "serde_spanned",
- "toml_datetime",
- "winnow",
- ]
- [[package]]
- name = "unicode-bidi"
- version = "0.3.15"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "08f95100a766bf4f8f28f90d77e0a5461bbdb219042e7679bebe79004fed8d75"
- [[package]]
- name = "unicode-ident"
- version = "1.0.12"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "3354b9ac3fae1ff6755cb6db53683adb661634f67557942dea4facebec0fee4b"
- [[package]]
- name = "unicode-normalization"
- version = "0.1.23"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a56d1686db2308d901306f92a263857ef59ea39678a5458e7cb17f01415101f5"
- dependencies = [
- "tinyvec",
- ]
- [[package]]
- name = "url"
- version = "2.5.2"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "22784dbdf76fdde8af1aeda5622b546b422b6fc585325248a2bf9f5e41e94d6c"
- dependencies = [
- "form_urlencoded",
- "idna",
- "percent-encoding",
- ]
- [[package]]
- name = "utf8parse"
- version = "0.2.2"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "06abde3611657adf66d383f00b093d7faecc7fa57071cce2578660c9f1010821"
- [[package]]
- name = "uuid"
- version = "1.10.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "81dfa00651efa65069b0b6b651f4aaa31ba9e3c3ce0137aaad053604ee7e0314"
- dependencies = [
- "getrandom",
- ]
- [[package]]
- name = "vcpkg"
- version = "0.2.15"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "accd4ea62f7bb7a82fe23066fb0957d48ef677f6eeb8215f372f52e48bb32426"
- [[package]]
- name = "wasi"
- version = "0.11.0+wasi-snapshot-preview1"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "9c8d87e72b64a3b4db28d11ce29237c246188f4f51057d65a7eab63b7987e423"
- [[package]]
- name = "windows-sys"
- version = "0.48.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "677d2418bec65e3338edb076e806bc1ec15693c5d0104683f2efe857f61056a9"
- dependencies = [
- "windows-targets 0.48.5",
- ]
- [[package]]
- name = "windows-sys"
- version = "0.52.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "282be5f36a8ce781fad8c8ae18fa3f9beff57ec1b52cb3de0789201425d9a33d"
- dependencies = [
- "windows-targets 0.52.6",
- ]
- [[package]]
- name = "windows-sys"
- version = "0.59.0"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "1e38bc4d79ed67fd075bcc251a1c39b32a1776bbe92e5bef1f0bf1f8c531853b"
- dependencies = [
- "windows-targets 0.52.6",
- ]
- [[package]]
- name = "windows-targets"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "9a2fa6e2155d7247be68c096456083145c183cbbbc2764150dda45a87197940c"
- dependencies = [
- "windows_aarch64_gnullvm 0.48.5",
- "windows_aarch64_msvc 0.48.5",
- "windows_i686_gnu 0.48.5",
- "windows_i686_msvc 0.48.5",
- "windows_x86_64_gnu 0.48.5",
- "windows_x86_64_gnullvm 0.48.5",
- "windows_x86_64_msvc 0.48.5",
- ]
- [[package]]
- name = "windows-targets"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "9b724f72796e036ab90c1021d4780d4d3d648aca59e491e6b98e725b84e99973"
- dependencies = [
- "windows_aarch64_gnullvm 0.52.6",
- "windows_aarch64_msvc 0.52.6",
- "windows_i686_gnu 0.52.6",
- "windows_i686_gnullvm",
- "windows_i686_msvc 0.52.6",
- "windows_x86_64_gnu 0.52.6",
- "windows_x86_64_gnullvm 0.52.6",
- "windows_x86_64_msvc 0.52.6",
- ]
- [[package]]
- name = "windows_aarch64_gnullvm"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "2b38e32f0abccf9987a4e3079dfb67dcd799fb61361e53e2882c3cbaf0d905d8"
- [[package]]
- name = "windows_aarch64_gnullvm"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "32a4622180e7a0ec044bb555404c800bc9fd9ec262ec147edd5989ccd0c02cd3"
- [[package]]
- name = "windows_aarch64_msvc"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "dc35310971f3b2dbbf3f0690a219f40e2d9afcf64f9ab7cc1be722937c26b4bc"
- [[package]]
- name = "windows_aarch64_msvc"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "09ec2a7bb152e2252b53fa7803150007879548bc709c039df7627cabbd05d469"
- [[package]]
- name = "windows_i686_gnu"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "a75915e7def60c94dcef72200b9a8e58e5091744960da64ec734a6c6e9b3743e"
- [[package]]
- name = "windows_i686_gnu"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "8e9b5ad5ab802e97eb8e295ac6720e509ee4c243f69d781394014ebfe8bbfa0b"
- [[package]]
- name = "windows_i686_gnullvm"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "0eee52d38c090b3caa76c563b86c3a4bd71ef1a819287c19d586d7334ae8ed66"
- [[package]]
- name = "windows_i686_msvc"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "8f55c233f70c4b27f66c523580f78f1004e8b5a8b659e05a4eb49d4166cca406"
- [[package]]
- name = "windows_i686_msvc"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "240948bc05c5e7c6dabba28bf89d89ffce3e303022809e73deaefe4f6ec56c66"
- [[package]]
- name = "windows_x86_64_gnu"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "53d40abd2583d23e4718fddf1ebec84dbff8381c07cae67ff7768bbf19c6718e"
- [[package]]
- name = "windows_x86_64_gnu"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "147a5c80aabfbf0c7d901cb5895d1de30ef2907eb21fbbab29ca94c5b08b1a78"
- [[package]]
- name = "windows_x86_64_gnullvm"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "0b7b52767868a23d5bab768e390dc5f5c55825b6d30b86c844ff2dc7414044cc"
- [[package]]
- name = "windows_x86_64_gnullvm"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "24d5b23dc417412679681396f2b49f3de8c1473deb516bd34410872eff51ed0d"
- [[package]]
- name = "windows_x86_64_msvc"
- version = "0.48.5"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "ed94fce61571a4006852b7389a063ab983c02eb1bb37b47f8272ce92d06d9538"
- [[package]]
- name = "windows_x86_64_msvc"
- version = "0.52.6"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "589f6da84c646204747d1270a2a5661ea66ed1cced2631d546fdfb155959f9ec"
- [[package]]
- name = "winnow"
- version = "0.6.18"
- source = "registry+https://github.com/rust-lang/crates.io-index"
- checksum = "68a9bda4691f099d435ad181000724da8e5899daa10713c2d432552b9ccd3a6f"
- dependencies = [
- "memchr",
- ]
|