pandora_lib_assembler/Cargo.lock

# This file is automatically @generated by Cargo.
# It is not intended for manual editing.
version = 3

[[package]]
name = "adler2"
version = "2.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "512761e0bb2578dd7380c6baaa0f4ce03e84f95e960231d1dec8bf4d7d6e2627"

[[package]]
name = "aho-corasick"
version = "1.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8e60d3430d3a69478ad0993f19238d2df97c507009a52b3c10addcd7f6bcb916"
dependencies = [
 "memchr",
]

[[package]]
name = "anstream"
version = "0.6.15"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "64e15c1ab1f89faffbf04a634d5e1962e9074f2741eef6d97f3c4e322426d526"
dependencies = [
 "anstyle",
 "anstyle-parse",
 "anstyle-query",
 "anstyle-wincon",
 "colorchoice",
 "is_terminal_polyfill",
 "utf8parse",
]

[[package]]
name = "anstyle"
version = "1.0.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1bec1de6f59aedf83baf9ff929c98f2ad654b97c9510f4e70cf6f661d49fd5b1"

[[package]]
name = "anstyle-parse"
version = "0.2.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "eb47de1e80c2b463c735db5b217a0ddc39d612e7ac9e2e96a5aed1f57616c1cb"
dependencies = [
 "utf8parse",
]

[[package]]
name = "anstyle-query"
version = "1.1.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6d36fc52c7f6c869915e99412912f22093507da8d9e942ceaf66fe4b7c14422a"
dependencies = [
 "windows-sys 0.52.0",
]

[[package]]
name = "anstyle-wincon"
version = "3.0.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5bf74e1b6e971609db8ca7a9ce79fd5768ab6ae46441c572e46cf596f59e57f8"
dependencies = [
 "anstyle",
 "windows-sys 0.52.0",
]

[[package]]
name = "anyhow"
version = "1.0.86"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b3d1d046238990b9cf5bcde22a3fb3584ee5cf65fb2765f454ed428c7a0063da"

[[package]]
name = "arrayvec"
version = "0.7.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7c02d123df017efcdfbd739ef81735b36c5ba83ec3c59c80a9d7ecc718f92e50"

[[package]]
name = "bam"
version = "0.1.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "109918ba142fc1d2e67a4fead8b0a8bfb6370fa50559baf0c024de46dcafce0d"
dependencies = [
 "byteorder",
 "crc32fast",
 "flate2",
]

[[package]]
name = "base64"
version = "0.22.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "72b3254f16251a8381aa12e40e3c4d2f0199f8c6508fbecb9d91f575e0fbb8c6"

[[package]]
name = "bio-types"
version = "1.0.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f4dcf54f8b7f51450207d54780bab09c05f30b8b0caa991545082842e466ad7e"
dependencies = [
 "derive-new 0.6.0",
 "lazy_static",
 "regex",
 "strum_macros",
 "thiserror",
]

[[package]]
name = "bitflags"
version = "2.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b048fb63fd8b5923fc5aa7b340d8e156aec7ec02f0c78fa8a6ddc2613f6f71de"

[[package]]
name = "bstr"
version = "1.10.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "40723b8fb387abc38f4f4a37c09073622e41dd12327033091ef8950659e6dc0c"
dependencies = [
 "memchr",
 "serde",
]

[[package]]
name = "byteorder"
version = "1.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"

[[package]]
name = "bytes"
version = "1.7.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8318a53db07bb3f8dca91a600466bdb3f2eaadeedfdbcf02e1accbad9271ba50"

[[package]]
name = "bzip2-sys"
version = "0.1.11+1.0.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "736a955f3fa7875102d57c82b8cac37ec45224a07fd32d58f9f7a186b6cd4cdc"
dependencies = [
 "cc",
 "libc",
 "pkg-config",
]

[[package]]
name = "cc"
version = "1.1.13"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "72db2f7947ecee9b03b510377e8bb9077afa27176fdbff55c51027e976fdcc48"
dependencies = [
 "jobserver",
 "libc",
 "shlex",
]

[[package]]
name = "cfg-if"
version = "1.0.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"

[[package]]
name = "cmake"
version = "0.1.51"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fb1e43aa7fd152b1f968787f7dbcdeb306d1867ff373c69955211876c053f91a"
dependencies = [
 "cc",
]

[[package]]
name = "colorchoice"
version = "1.0.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d3fd119d74b830634cea2a0f58bbd0d54540518a14397557951e79340abc28c0"

[[package]]
name = "confy"
version = "0.6.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "45b1f4c00870f07dc34adcac82bb6a72cc5aabca8536ba1797e01df51d2ce9a0"
dependencies = [
 "directories",
 "serde",
 "thiserror",
 "toml",
]

[[package]]
name = "crc32fast"
version = "1.4.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a97769d94ddab943e4510d138150169a2758b5ef3eb191a9ee688de3e23ef7b3"
dependencies = [
 "cfg-if",
]

[[package]]
name = "crossbeam-channel"
version = "0.5.13"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "33480d6946193aa8033910124896ca395333cae7e2d1113d1fef6c3272217df2"
dependencies = [
 "crossbeam-utils",
]

[[package]]
name = "crossbeam-deque"
version = "0.8.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "613f8cc01fe9cf1a3eb3d7f488fd2fa8388403e97039e2f73692932e291a770d"
dependencies = [
 "crossbeam-epoch",
 "crossbeam-utils",
]

[[package]]
name = "crossbeam-epoch"
version = "0.9.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5b82ac4a3c2ca9c3460964f020e1402edd5753411d7737aa39c3714ad1b5420e"
dependencies = [
 "crossbeam-utils",
]

[[package]]
name = "crossbeam-utils"
version = "0.8.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "22ec99545bb0ed0ea7bb9b8e1e9122ea386ff8a48c0922e43f36d45ab09e0e80"

[[package]]
name = "csv"
version = "1.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ac574ff4d437a7b5ad237ef331c17ccca63c46479e5b5453eb8e10bb99a759fe"
dependencies = [
 "csv-core",
 "itoa",
 "ryu",
 "serde",
]

[[package]]
name = "csv-core"
version = "0.1.11"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5efa2b3d7902f4b634a20cae3c9c4e6209dc4779feb6863329607560143efa70"
dependencies = [
 "memchr",
]

[[package]]
name = "curl-sys"
version = "0.4.74+curl-8.9.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8af10b986114528fcdc4b63b6f5f021b7057618411046a4de2ba0f0149a097bf"
dependencies = [
 "cc",
 "libc",
 "libz-sys",
 "openssl-sys",
 "pkg-config",
 "vcpkg",
 "windows-sys 0.52.0",
]

[[package]]
name = "custom_derive"
version = "0.1.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ef8ae57c4978a2acd8b869ce6b9ca1dfe817bff704c220209fdef2c0b75a01b9"

[[package]]
name = "derive-new"
version = "0.5.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3418329ca0ad70234b9735dc4ceed10af4df60eff9c8e7b06cb5e520d92c3535"
dependencies = [
 "proc-macro2",
 "quote",
 "syn 1.0.109",
]

[[package]]
name = "derive-new"
version = "0.6.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d150dea618e920167e5973d70ae6ece4385b7164e0d799fe7c122dd0a5d912ad"
dependencies = [
 "proc-macro2",
 "quote",
 "syn 2.0.75",
]

[[package]]
name = "directories"
version = "5.0.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9a49173b84e034382284f27f1af4dcbbd231ffa358c0fe316541a7337f376a35"
dependencies = [
 "dirs-sys",
]

[[package]]
name = "dirs-sys"
version = "0.4.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "520f05a5cbd335fae5a99ff7a6ab8627577660ee5cfd6a94a6a929b52ff0321c"
dependencies = [
 "libc",
 "option-ext",
 "redox_users",
 "windows-sys 0.48.0",
]

[[package]]
name = "duct"
version = "0.13.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e4ab5718d1224b63252cd0c6f74f6480f9ffeb117438a2e0f5cf6d9a4798929c"
dependencies = [
 "libc",
 "once_cell",
 "os_pipe",
 "shared_child",
]

[[package]]
name = "either"
version = "1.13.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "60b1af1c220855b6ceac025d3f6ecdd2b7c4894bfe9cd9bda4fbb4bc7c0d4cf0"

[[package]]
name = "env_filter"
version = "0.1.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4f2c92ceda6ceec50f43169f9ee8424fe2db276791afde7b2cd8bc084cb376ab"
dependencies = [
 "log",
 "regex",
]

[[package]]
name = "env_logger"
version = "0.11.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e13fa619b91fb2381732789fc5de83b45675e882f66623b7d8cb4f643017018d"
dependencies = [
 "anstream",
 "anstyle",
 "env_filter",
 "humantime",
 "log",
]

[[package]]
name = "equivalent"
version = "1.0.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5443807d6dff69373d433ab9ef5378ad8df50ca6298caf15de6e52e24aaf54d5"

[[package]]
name = "fixedbitset"
version = "0.4.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0ce7134b9999ecaf8bcd65542e436736ef32ddca1b3e06094cb6ec5755203b80"

[[package]]
name = "flate2"
version = "1.0.32"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9c0596c1eac1f9e04ed902702e9878208b336edc9d6fddc8a48387349bab3666"
dependencies = [
 "crc32fast",
 "miniz_oxide",
]

[[package]]
name = "form_urlencoded"
version = "1.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e13624c2627564efccf4934284bdd98cbaa14e79b0b5a141218e507b3a823456"
dependencies = [
 "percent-encoding",
]

[[package]]
name = "fs-utils"
version = "1.1.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "6fc7a9dc005c944c98a935e7fd626faf5bf7e5a609f94bc13e42fc4a02e52593"
dependencies = [
 "quick-error",
]

[[package]]
name = "getrandom"
version = "0.2.15"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c4567c8db10ae91089c99af84c68c38da3ec2f087c3f82960bcdbf3656b6f4d7"
dependencies = [
 "cfg-if",
 "libc",
 "wasi",
]

[[package]]
name = "glob"
version = "0.3.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d2fabcfbdc87f4758337ca535fb41a6d701b65693ce38287d856d1674551ec9b"

[[package]]
name = "hashbrown"
version = "0.14.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e5274423e17b7c9fc20b6e7e208532f9b19825d82dfd615708b70edd83df41f1"

[[package]]
name = "heck"
version = "0.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2304e00983f87ffb38b55b444b5e3b60a884b5d30c0fca7d82fe33449bbe55ea"

[[package]]
name = "hts-sys"
version = "2.1.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e9f348d14cb4e50444e39fcd6b00302fe2ed2bc88094142f6278391d349a386d"
dependencies = [
 "bzip2-sys",
 "cc",
 "curl-sys",
 "fs-utils",
 "glob",
 "libz-sys",
 "lzma-sys",
 "openssl-sys",
]

[[package]]
name = "humantime"
version = "2.1.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9a3a5bfb195931eeb336b2a7b4d761daec841b97f947d34394601737a7bba5e4"

[[package]]
name = "idna"
version = "0.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "634d9b1461af396cad843f47fdba5597a4f9e6ddd4bfb6ff5d85028c25cb12f6"
dependencies = [
 "unicode-bidi",
 "unicode-normalization",
]

[[package]]
name = "ieee754"
version = "0.2.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9007da9cacbd3e6343da136e98b0d2df013f553d35bdec8b518f07bea768e19c"

[[package]]
name = "indexmap"
version = "2.4.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "93ead53efc7ea8ed3cfb0c79fc8023fbb782a5432b52830b6518941cebe6505c"
dependencies = [
 "equivalent",
 "hashbrown",
]

[[package]]
name = "is_terminal_polyfill"
version = "1.70.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7943c866cc5cd64cbc25b2e01621d07fa8eb2a1a23160ee81ce38704e97b8ecf"

[[package]]
name = "itoa"
version = "1.0.11"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "49f1f14873335454500d59611f1cf4a4b0f786f9ac11f4312a78e4cf2566695b"

[[package]]
name = "jobserver"
version = "0.1.32"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "48d1dbcbbeb6a7fec7e059840aa538bd62aaccf972c7346c4d9d2059312853d0"
dependencies = [
 "libc",
]

[[package]]
name = "lazy_static"
version = "1.5.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bbd2bcb4c963f2ddae06a2efc7e9f3591312473c50c6685e1f298068316e66fe"

[[package]]
name = "libc"
version = "0.2.158"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d8adc4bb1803a324070e64a98ae98f38934d91957a99cfb3a43dcbc01bc56439"

[[package]]
name = "libredox"
version = "0.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c0ff37bd590ca25063e35af745c343cb7a0271906fb7b37e4813e8f79f00268d"
dependencies = [
 "bitflags",
 "libc",
]

[[package]]
name = "libz-sys"
version = "1.1.19"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fdc53a7799a7496ebc9fd29f31f7df80e83c9bda5299768af5f9e59eeea74647"
dependencies = [
 "cc",
 "cmake",
 "libc",
 "pkg-config",
 "vcpkg",
]

[[package]]
name = "linear-map"
version = "1.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bfae20f6b19ad527b550c223fddc3077a547fc70cda94b9b566575423fd303ee"

[[package]]
name = "log"
version = "0.4.22"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a7a70ba024b9dc04c27ea2f0c0548feb474ec5c54bba33a7f72f873a39d07b24"

[[package]]
name = "lzma-sys"
version = "0.1.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5fda04ab3764e6cde78b9974eec4f779acaba7c4e84b36eca3cf77c581b85d27"
dependencies = [
 "cc",
 "libc",
 "pkg-config",
]

[[package]]
name = "memchr"
version = "2.7.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "78ca9ab1a0babb1e7d5695e3530886289c18cf2f87ec19a575a0abdce112e3a3"

[[package]]
name = "minimal-lexical"
version = "0.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "68354c5c6bd36d73ff3feceb05efa59b6acb7626617f4962be322a825e61f79a"

[[package]]
name = "miniz_oxide"
version = "0.8.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e2d80299ef12ff69b16a84bb182e3b9df68b5a91574d3d4fa6e41b65deec4df1"
dependencies = [
 "adler2",
]

[[package]]
name = "newtype_derive"
version = "0.1.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ac8cd24d9f185bb7223958d8c1ff7a961b74b1953fd05dba7cc568a63b3861ec"
dependencies = [
 "rustc_version",
]

[[package]]
name = "nom"
version = "7.1.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d273983c5a657a70a3e8f2a01329822f3b8c8172b73826411a55751e404a0a4a"
dependencies = [
 "memchr",
 "minimal-lexical",
]

[[package]]
name = "noodles-bgzf"
version = "0.32.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2b2fba0f4a64cc897d9396d730a0c444d148daed7de31ad5904ecc673178fc9d"
dependencies = [
 "byteorder",
 "bytes",
 "crossbeam-channel",
 "flate2",
]

[[package]]
name = "noodles-core"
version = "0.15.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c5a8c6b020d1205abef2b0fab4463a6c5ecc3c8f4d561ca8b0d1a42323376200"
dependencies = [
 "bstr",
]

[[package]]
name = "noodles-fasta"
version = "0.41.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d7a1662ac3ace299515c982a322e378bbeb4c1bd90fb098d823ef0f3a6abcc00"
dependencies = [
 "bstr",
 "bytes",
 "memchr",
 "noodles-bgzf",
 "noodles-core",
]

[[package]]
name = "noodles-fastq"
version = "0.13.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c1edf1f924acddeee36304c444e242b9bda52ef9383dc2d7f008fca190753207"
dependencies = [
 "memchr",
]

[[package]]
name = "num-format"
version = "0.4.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a652d9771a63711fd3c3deb670acfbe5c30a4072e664d7a3bf5a9e1056ac72c3"
dependencies = [
 "arrayvec",
 "itoa",
]

[[package]]
name = "once_cell"
version = "1.19.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3fdb12b2476b595f9358c5161aa467c2438859caa136dec86c26fdd2efe17b92"

[[package]]
name = "openssl-src"
version = "300.3.1+3.3.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7259953d42a81bf137fbbd73bd30a8e1914d6dce43c2b90ed575783a22608b91"
dependencies = [
 "cc",
]

[[package]]
name = "openssl-sys"
version = "0.9.103"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7f9e8deee91df40a943c71b917e5874b951d32a802526c85721ce3b776c929d6"
dependencies = [
 "cc",
 "libc",
 "openssl-src",
 "pkg-config",
 "vcpkg",
]

[[package]]
name = "option-ext"
version = "0.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "04744f49eae99ab78e0d5c0b603ab218f515ea8cfe5a456d7629ad883a3b6e7d"

[[package]]
name = "os_pipe"
version = "1.2.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5ffd2b0a5634335b135d5728d84c5e0fd726954b87111f7506a61c502280d982"
dependencies = [
 "libc",
 "windows-sys 0.59.0",
]

[[package]]
name = "pandora_lib_assembler"
version = "0.1.0"
dependencies = [
 "anyhow",
 "bam",
 "csv",
 "duct",
 "env_logger",
 "flate2",
 "glob",
 "log",
 "nom",
 "noodles-fasta",
 "noodles-fastq",
 "pandora_lib_blastn",
 "pandora_lib_igv",
 "petgraph",
 "rayon",
 "regex",
 "rust-htslib",
 "serde",
 "uuid",
]

[[package]]
name = "pandora_lib_blastn"
version = "0.1.0"
source = "git+https://git.t0m4.fr/Thomas/pandora_lib_blastn.git#c6bf7f4e737d022bd22210f23808e690103962c5"
dependencies = [
 "anyhow",
 "confy",
 "env_logger",
 "log",
 "num-format",
 "serde",
 "serde_json",
 "thiserror",
]

[[package]]
name = "pandora_lib_igv"
version = "0.1.0"
source = "git+https://git.t0m4.fr/Thomas/pandora_lib_igv.git#268f631dbe94132b8291f80864a8cbcef12e76ad"
dependencies = [
 "anyhow",
 "base64",
 "flate2",
 "serde",
 "serde_json",
 "smart-default",
]

[[package]]
name = "percent-encoding"
version = "2.3.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e3148f5046208a5d56bcfc03053e3ca6334e51da8dfb19b6cdc8b306fae3283e"

[[package]]
name = "petgraph"
version = "0.6.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b4c5cc86750666a3ed20bdaf5ca2a0344f9c67674cae0515bec2da16fbaa47db"
dependencies = [
 "fixedbitset",
 "indexmap",
]

[[package]]
name = "pkg-config"
version = "0.3.30"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d231b230927b5e4ad203db57bbcbee2802f6bce620b1e4a9024a07d94e2907ec"

[[package]]
name = "proc-macro2"
version = "1.0.86"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5e719e8df665df0d1c8fbfd238015744736151d4445ec0836b8e628aae103b77"
dependencies = [
 "unicode-ident",
]

[[package]]
name = "quick-error"
version = "1.2.3"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a1d01941d82fa2ab50be1e79e6714289dd7cde78eba4c074bc5a4374f650dfe0"

[[package]]
name = "quote"
version = "1.0.36"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0fa76aaf39101c457836aec0ce2316dbdc3ab723cdda1c6bd4e6ad4208acaca7"
dependencies = [
 "proc-macro2",
]

[[package]]
name = "rayon"
version = "1.10.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b418a60154510ca1a002a752ca9714984e21e4241e804d32555251faf8b78ffa"
dependencies = [
 "either",
 "rayon-core",
]

[[package]]
name = "rayon-core"
version = "1.12.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1465873a3dfdaa8ae7cb14b4383657caab0b3e8a0aa9ae8e04b044854c8dfce2"
dependencies = [
 "crossbeam-deque",
 "crossbeam-utils",
]

[[package]]
name = "redox_users"
version = "0.4.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ba009ff324d1fc1b900bd1fdb31564febe58a8ccc8a6fdbb93b543d33b13ca43"
dependencies = [
 "getrandom",
 "libredox",
 "thiserror",
]

[[package]]
name = "regex"
version = "1.10.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4219d74c6b67a3654a9fbebc4b419e22126d13d2f3c4a07ee0cb61ff79a79619"
dependencies = [
 "aho-corasick",
 "memchr",
 "regex-automata",
 "regex-syntax",
]

[[package]]
name = "regex-automata"
version = "0.4.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "38caf58cc5ef2fed281f89292ef23f6365465ed9a41b7a7754eb4e26496c92df"
dependencies = [
 "aho-corasick",
 "memchr",
 "regex-syntax",
]

[[package]]
name = "regex-syntax"
version = "0.8.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "7a66a03ae7c801facd77a29370b4faec201768915ac14a721ba36f20bc9c209b"

[[package]]
name = "rust-htslib"
version = "0.46.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "aec6f9ca4601beb4ae75ff8c99144dd15de5a873f6adf058da299962c760968e"
dependencies = [
 "bio-types",
 "byteorder",
 "custom_derive",
 "derive-new 0.5.9",
 "hts-sys",
 "ieee754",
 "lazy_static",
 "libc",
 "libz-sys",
 "linear-map",
 "newtype_derive",
 "regex",
 "thiserror",
 "url",
]

[[package]]
name = "rustc_version"
version = "0.1.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c5f5376ea5e30ce23c03eb77cbe4962b988deead10910c372b226388b594c084"
dependencies = [
 "semver",
]

[[package]]
name = "rustversion"
version = "1.0.17"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "955d28af4278de8121b7ebeb796b6a45735dc01436d898801014aced2773a3d6"

[[package]]
name = "ryu"
version = "1.0.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f3cb5ba0dc43242ce17de99c180e96db90b235b8a9fdc9543c96d2209116bd9f"

[[package]]
name = "semver"
version = "0.1.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "d4f410fedcf71af0345d7607d246e7ad15faaadd49d240ee3b24e5dc21a820ac"

[[package]]
name = "serde"
version = "1.0.209"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "99fce0ffe7310761ca6bf9faf5115afbc19688edd00171d81b1bb1b116c63e09"
dependencies = [
 "serde_derive",
]

[[package]]
name = "serde_derive"
version = "1.0.209"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a5831b979fd7b5439637af1752d535ff49f4860c0f341d1baeb6faf0f4242170"
dependencies = [
 "proc-macro2",
 "quote",
 "syn 2.0.75",
]

[[package]]
name = "serde_json"
version = "1.0.125"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "83c8e735a073ccf5be70aa8066aa984eaf2fa000db6c8d0100ae605b366d31ed"
dependencies = [
 "itoa",
 "memchr",
 "ryu",
 "serde",
]

[[package]]
name = "serde_spanned"
version = "0.6.7"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "eb5b1b31579f3811bf615c144393417496f152e12ac8b7663bf664f4a815306d"
dependencies = [
 "serde",
]

[[package]]
name = "shared_child"
version = "1.0.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "09fa9338aed9a1df411814a5b2252f7cd206c55ae9bf2fa763f8de84603aa60c"
dependencies = [
 "libc",
 "windows-sys 0.59.0",
]

[[package]]
name = "shlex"
version = "1.3.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0fda2ff0d084019ba4d7c6f371c95d8fd75ce3524c3cb8fb653a3023f6323e64"

[[package]]
name = "smart-default"
version = "0.7.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0eb01866308440fc64d6c44d9e86c5cc17adfe33c4d6eed55da9145044d0ffc1"
dependencies = [
 "proc-macro2",
 "quote",
 "syn 2.0.75",
]

[[package]]
name = "strum_macros"
version = "0.26.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4c6bee85a5a24955dc440386795aa378cd9cf82acd5f764469152d2270e581be"
dependencies = [
 "heck",
 "proc-macro2",
 "quote",
 "rustversion",
 "syn 2.0.75",
]

[[package]]
name = "syn"
version = "1.0.109"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "72b64191b275b66ffe2469e8af2c1cfe3bafa67b529ead792a6d0160888b4237"
dependencies = [
 "proc-macro2",
 "quote",
 "unicode-ident",
]

[[package]]
name = "syn"
version = "2.0.75"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f6af063034fc1935ede7be0122941bafa9bacb949334d090b77ca98b5817c7d9"
dependencies = [
 "proc-macro2",
 "quote",
 "unicode-ident",
]

[[package]]
name = "thiserror"
version = "1.0.63"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "c0342370b38b6a11b6cc11d6a805569958d54cfa061a29969c3b5ce2ea405724"
dependencies = [
 "thiserror-impl",
]

[[package]]
name = "thiserror-impl"
version = "1.0.63"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a4558b58466b9ad7ca0f102865eccc95938dca1a74a856f2b57b6629050da261"
dependencies = [
 "proc-macro2",
 "quote",
 "syn 2.0.75",
]

[[package]]
name = "tinyvec"
version = "1.8.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "445e881f4f6d382d5f27c034e25eb92edd7c784ceab92a0937db7f2e9471b938"
dependencies = [
 "tinyvec_macros",
]

[[package]]
name = "tinyvec_macros"
version = "0.1.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1f3ccbac311fea05f86f61904b462b55fb3df8837a366dfc601a0161d0532f20"

[[package]]
name = "toml"
version = "0.8.19"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a1ed1f98e3fdc28d6d910e6737ae6ab1a93bf1985935a1193e68f93eeb68d24e"
dependencies = [
 "serde",
 "serde_spanned",
 "toml_datetime",
 "toml_edit",
]

[[package]]
name = "toml_datetime"
version = "0.6.8"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0dd7358ecb8fc2f8d014bf86f6f638ce72ba252a2c3a2572f2a795f1d23efb41"
dependencies = [
 "serde",
]

[[package]]
name = "toml_edit"
version = "0.22.20"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "583c44c02ad26b0c3f3066fe629275e50627026c51ac2e595cca4c230ce1ce1d"
dependencies = [
 "indexmap",
 "serde",
 "serde_spanned",
 "toml_datetime",
 "winnow",
]

[[package]]
name = "unicode-bidi"
version = "0.3.15"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "08f95100a766bf4f8f28f90d77e0a5461bbdb219042e7679bebe79004fed8d75"

[[package]]
name = "unicode-ident"
version = "1.0.12"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3354b9ac3fae1ff6755cb6db53683adb661634f67557942dea4facebec0fee4b"

[[package]]
name = "unicode-normalization"
version = "0.1.23"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a56d1686db2308d901306f92a263857ef59ea39678a5458e7cb17f01415101f5"
dependencies = [
 "tinyvec",
]

[[package]]
name = "url"
version = "2.5.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "22784dbdf76fdde8af1aeda5622b546b422b6fc585325248a2bf9f5e41e94d6c"
dependencies = [
 "form_urlencoded",
 "idna",
 "percent-encoding",
]

[[package]]
name = "utf8parse"
version = "0.2.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "06abde3611657adf66d383f00b093d7faecc7fa57071cce2578660c9f1010821"

[[package]]
name = "uuid"
version = "1.10.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "81dfa00651efa65069b0b6b651f4aaa31ba9e3c3ce0137aaad053604ee7e0314"
dependencies = [
 "getrandom",
]

[[package]]
name = "vcpkg"
version = "0.2.15"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "accd4ea62f7bb7a82fe23066fb0957d48ef677f6eeb8215f372f52e48bb32426"

[[package]]
name = "wasi"
version = "0.11.0+wasi-snapshot-preview1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9c8d87e72b64a3b4db28d11ce29237c246188f4f51057d65a7eab63b7987e423"

[[package]]
name = "windows-sys"
version = "0.48.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "677d2418bec65e3338edb076e806bc1ec15693c5d0104683f2efe857f61056a9"
dependencies = [
 "windows-targets 0.48.5",
]

[[package]]
name = "windows-sys"
version = "0.52.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "282be5f36a8ce781fad8c8ae18fa3f9beff57ec1b52cb3de0789201425d9a33d"
dependencies = [
 "windows-targets 0.52.6",
]

[[package]]
name = "windows-sys"
version = "0.59.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1e38bc4d79ed67fd075bcc251a1c39b32a1776bbe92e5bef1f0bf1f8c531853b"
dependencies = [
 "windows-targets 0.52.6",
]

[[package]]
name = "windows-targets"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9a2fa6e2155d7247be68c096456083145c183cbbbc2764150dda45a87197940c"
dependencies = [
 "windows_aarch64_gnullvm 0.48.5",
 "windows_aarch64_msvc 0.48.5",
 "windows_i686_gnu 0.48.5",
 "windows_i686_msvc 0.48.5",
 "windows_x86_64_gnu 0.48.5",
 "windows_x86_64_gnullvm 0.48.5",
 "windows_x86_64_msvc 0.48.5",
]

[[package]]
name = "windows-targets"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9b724f72796e036ab90c1021d4780d4d3d648aca59e491e6b98e725b84e99973"
dependencies = [
 "windows_aarch64_gnullvm 0.52.6",
 "windows_aarch64_msvc 0.52.6",
 "windows_i686_gnu 0.52.6",
 "windows_i686_gnullvm",
 "windows_i686_msvc 0.52.6",
 "windows_x86_64_gnu 0.52.6",
 "windows_x86_64_gnullvm 0.52.6",
 "windows_x86_64_msvc 0.52.6",
]

[[package]]
name = "windows_aarch64_gnullvm"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2b38e32f0abccf9987a4e3079dfb67dcd799fb61361e53e2882c3cbaf0d905d8"

[[package]]
name = "windows_aarch64_gnullvm"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "32a4622180e7a0ec044bb555404c800bc9fd9ec262ec147edd5989ccd0c02cd3"

[[package]]
name = "windows_aarch64_msvc"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "dc35310971f3b2dbbf3f0690a219f40e2d9afcf64f9ab7cc1be722937c26b4bc"

[[package]]
name = "windows_aarch64_msvc"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "09ec2a7bb152e2252b53fa7803150007879548bc709c039df7627cabbd05d469"

[[package]]
name = "windows_i686_gnu"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a75915e7def60c94dcef72200b9a8e58e5091744960da64ec734a6c6e9b3743e"

[[package]]
name = "windows_i686_gnu"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8e9b5ad5ab802e97eb8e295ac6720e509ee4c243f69d781394014ebfe8bbfa0b"

[[package]]
name = "windows_i686_gnullvm"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0eee52d38c090b3caa76c563b86c3a4bd71ef1a819287c19d586d7334ae8ed66"

[[package]]
name = "windows_i686_msvc"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "8f55c233f70c4b27f66c523580f78f1004e8b5a8b659e05a4eb49d4166cca406"

[[package]]
name = "windows_i686_msvc"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "240948bc05c5e7c6dabba28bf89d89ffce3e303022809e73deaefe4f6ec56c66"

[[package]]
name = "windows_x86_64_gnu"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "53d40abd2583d23e4718fddf1ebec84dbff8381c07cae67ff7768bbf19c6718e"

[[package]]
name = "windows_x86_64_gnu"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "147a5c80aabfbf0c7d901cb5895d1de30ef2907eb21fbbab29ca94c5b08b1a78"

[[package]]
name = "windows_x86_64_gnullvm"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "0b7b52767868a23d5bab768e390dc5f5c55825b6d30b86c844ff2dc7414044cc"

[[package]]
name = "windows_x86_64_gnullvm"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "24d5b23dc417412679681396f2b49f3de8c1473deb516bd34410872eff51ed0d"

[[package]]
name = "windows_x86_64_msvc"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ed94fce61571a4006852b7389a063ab983c02eb1bb37b47f8272ce92d06d9538"

[[package]]
name = "windows_x86_64_msvc"
version = "0.52.6"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "589f6da84c646204747d1270a2a5661ea66ed1cced2631d546fdfb155959f9ec"

[[package]]
name = "winnow"
version = "0.6.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "68a9bda4691f099d435ad181000724da8e5899daa10713c2d432552b9ccd3a6f"
dependencies = [
 "memchr",
]