Thomas пре 1 година
родитељ
комит
1521d68dae
2 измењених фајлова са 65 додато и 290 уклоњено
  1. 64 289
      Cargo.lock
  2. 1 1
      Cargo.toml

+ 64 - 289
Cargo.lock

@@ -162,40 +162,19 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "5bc25126d18a012146a888a0298f2c22e1150327bd2765fc76d710a556b2d614"
 dependencies = [
  "ahash 0.8.11",
- "arrow-arith 49.0.0",
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-cast 49.0.0",
- "arrow-csv 49.0.0",
- "arrow-data 49.0.0",
- "arrow-ipc 49.0.0",
- "arrow-json 49.0.0",
- "arrow-ord 49.0.0",
- "arrow-row 49.0.0",
- "arrow-schema 49.0.0",
- "arrow-select 49.0.0",
- "arrow-string 49.0.0",
-]
-
-[[package]]
-name = "arrow"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "755b6da235ac356a869393c23668c663720b8749dd6f15e52b6c214b4b964cc7"
-dependencies = [
- "arrow-arith 54.2.0",
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-cast 54.2.0",
- "arrow-csv 54.2.0",
- "arrow-data 54.2.0",
- "arrow-ipc 54.2.0",
- "arrow-json 54.2.0",
- "arrow-ord 54.2.0",
- "arrow-row 54.2.0",
- "arrow-schema 54.2.0",
- "arrow-select 54.2.0",
- "arrow-string 54.2.0",
+ "arrow-arith",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-cast",
+ "arrow-csv",
+ "arrow-data",
+ "arrow-ipc",
+ "arrow-json",
+ "arrow-ord",
+ "arrow-row",
+ "arrow-schema",
+ "arrow-select",
+ "arrow-string",
 ]
 
 [[package]]
@@ -204,29 +183,15 @@ version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "34ccd45e217ffa6e53bbb0080990e77113bdd4e91ddb84e97b77649810bcf1a7"
 dependencies = [
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-data",
+ "arrow-schema",
  "chrono",
  "half",
  "num",
 ]
 
-[[package]]
-name = "arrow-arith"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "64656a1e0b13ca766f8440752e9a93e11014eec7b67909986f83ed0ab1fe37b8"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "chrono",
- "num",
-]
-
 [[package]]
 name = "arrow-array"
 version = "49.0.0"
@@ -234,31 +199,15 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "6bda9acea48b25123c08340f3a8ac361aa0f74469bb36f5ee9acf923fce23e9d"
 dependencies = [
  "ahash 0.8.11",
- "arrow-buffer 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
+ "arrow-buffer",
+ "arrow-data",
+ "arrow-schema",
  "chrono",
  "half",
  "hashbrown 0.14.5",
  "num",
 ]
 
-[[package]]
-name = "arrow-array"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "57a4a6d2896083cfbdf84a71a863b22460d0708f8206a8373c52e326cc72ea1a"
-dependencies = [
- "ahash 0.8.11",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "chrono",
- "half",
- "hashbrown 0.15.2",
- "num",
-]
-
 [[package]]
 name = "arrow-buffer"
 version = "49.0.0"
@@ -270,28 +219,17 @@ dependencies = [
  "num",
 ]
 
-[[package]]
-name = "arrow-buffer"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cef870583ce5e4f3b123c181706f2002fb134960f9a911900f64ba4830c7a43a"
-dependencies = [
- "bytes",
- "half",
- "num",
-]
-
 [[package]]
 name = "arrow-cast"
 version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "5dc0368ed618d509636c1e3cc20db1281148190a78f43519487b2daf07b63b4a"
 dependencies = [
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
- "arrow-select 49.0.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-data",
+ "arrow-schema",
+ "arrow-select",
  "base64 0.21.7",
  "chrono",
  "half",
@@ -299,37 +237,17 @@ dependencies = [
  "num",
 ]
 
-[[package]]
-name = "arrow-cast"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1ac7eba5a987f8b4a7d9629206ba48e19a1991762795bbe5d08497b7736017ee"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "arrow-select 54.2.0",
- "atoi",
- "base64 0.22.1",
- "chrono",
- "half",
- "lexical-core 1.0.5",
- "num",
- "ryu",
-]
-
 [[package]]
 name = "arrow-csv"
 version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "2e09aa6246a1d6459b3f14baeaa49606cfdbca34435c46320e14054d244987ca"
 dependencies = [
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-cast 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-cast",
+ "arrow-data",
+ "arrow-schema",
  "chrono",
  "csv",
  "csv-core",
@@ -338,42 +256,14 @@ dependencies = [
  "regex",
 ]
 
-[[package]]
-name = "arrow-csv"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "90f12542b8164398fc9ec595ff783c4cf6044daa89622c5a7201be920e4c0d4c"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-cast 54.2.0",
- "arrow-schema 54.2.0",
- "chrono",
- "csv",
- "csv-core",
- "lazy_static",
- "regex",
-]
-
 [[package]]
 name = "arrow-data"
 version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "907fafe280a3874474678c1858b9ca4cb7fd83fb8034ff5b6d6376205a08c634"
 dependencies = [
- "arrow-buffer 49.0.0",
- "arrow-schema 49.0.0",
- "half",
- "num",
-]
-
-[[package]]
-name = "arrow-data"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b095e8a4f3c309544935d53e04c3bfe4eea4e71c3de6fe0416d1f08bb4441a83"
-dependencies = [
- "arrow-buffer 54.2.0",
- "arrow-schema 54.2.0",
+ "arrow-buffer",
+ "arrow-schema",
  "half",
  "num",
 ]
@@ -384,25 +274,12 @@ version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "79a43d6808411886b8c7d4f6f7dd477029c1e77ffffffb7923555cc6579639cd"
 dependencies = [
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-cast 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
- "flatbuffers 23.5.26",
-]
-
-[[package]]
-name = "arrow-ipc"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "65c63da4afedde2b25ef69825cd4663ca76f78f79ffe2d057695742099130ff6"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "flatbuffers 24.12.23",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-cast",
+ "arrow-data",
+ "arrow-schema",
+ "flatbuffers",
 ]
 
 [[package]]
@@ -411,11 +288,11 @@ version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "d82565c91fd627922ebfe2810ee4e8346841b6f9361b87505a9acea38b614fee"
 dependencies = [
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-cast 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-cast",
+ "arrow-data",
+ "arrow-schema",
  "chrono",
  "half",
  "indexmap",
@@ -425,54 +302,21 @@ dependencies = [
  "serde_json",
 ]
 
-[[package]]
-name = "arrow-json"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9551d9400532f23a370cabbea1dc5a53c49230397d41f96c4c8eedf306199305"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-cast 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "chrono",
- "half",
- "indexmap",
- "lexical-core 1.0.5",
- "num",
- "serde",
- "serde_json",
-]
-
 [[package]]
 name = "arrow-ord"
 version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "9b23b0e53c0db57c6749997fd343d4c0354c994be7eca67152dd2bdb9a3e1bb4"
 dependencies = [
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
- "arrow-select 49.0.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-data",
+ "arrow-schema",
+ "arrow-select",
  "half",
  "num",
 ]
 
-[[package]]
-name = "arrow-ord"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6c07223476f8219d1ace8cd8d85fa18c4ebd8d945013f25ef5c72e85085ca4ee"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "arrow-select 54.2.0",
-]
-
 [[package]]
 name = "arrow-row"
 version = "49.0.0"
@@ -480,39 +324,20 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "361249898d2d6d4a6eeb7484be6ac74977e48da12a4dd81a708d620cc558117a"
 dependencies = [
  "ahash 0.8.11",
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-data",
+ "arrow-schema",
  "half",
  "hashbrown 0.14.5",
 ]
 
-[[package]]
-name = "arrow-row"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "91b194b38bfd89feabc23e798238989c6648b2506ad639be42ec8eb1658d82c4"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "half",
-]
-
 [[package]]
 name = "arrow-schema"
 version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "09e28a5e781bf1b0f981333684ad13f5901f4cd2f20589eab7cf1797da8fc167"
 
-[[package]]
-name = "arrow-schema"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0f40f6be8f78af1ab610db7d9b236e21d587b7168e368a36275d2e5670096735"
-
 [[package]]
 name = "arrow-select"
 version = "49.0.0"
@@ -520,24 +345,10 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "4f6208466590960efc1d2a7172bc4ff18a67d6e25c529381d7f96ddaf0dc4036"
 dependencies = [
  "ahash 0.8.11",
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
- "num",
-]
-
-[[package]]
-name = "arrow-select"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ac265273864a820c4a179fc67182ccc41ea9151b97024e1be956f0f2369c2539"
-dependencies = [
- "ahash 0.8.11",
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-data",
+ "arrow-schema",
  "num",
 ]
 
@@ -547,42 +358,16 @@ version = "49.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "a4a48149c63c11c9ff571e50ab8f017d2a7cb71037a882b42f6354ed2da9acc7"
 dependencies = [
- "arrow-array 49.0.0",
- "arrow-buffer 49.0.0",
- "arrow-data 49.0.0",
- "arrow-schema 49.0.0",
- "arrow-select 49.0.0",
+ "arrow-array",
+ "arrow-buffer",
+ "arrow-data",
+ "arrow-schema",
+ "arrow-select",
  "num",
  "regex",
  "regex-syntax",
 ]
 
-[[package]]
-name = "arrow-string"
-version = "54.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d44c8eed43be4ead49128370f7131f054839d3d6003e52aebf64322470b8fbd0"
-dependencies = [
- "arrow-array 54.2.0",
- "arrow-buffer 54.2.0",
- "arrow-data 54.2.0",
- "arrow-schema 54.2.0",
- "arrow-select 54.2.0",
- "memchr",
- "num",
- "regex",
- "regex-syntax",
-]
-
-[[package]]
-name = "atoi"
-version = "2.0.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f28d99ec8bfea296261ca1af174f24225171fea9664ba9003cbebee704810528"
-dependencies = [
- "num-traits",
-]
-
 [[package]]
 name = "atomic-polyfill"
 version = "1.0.3"
@@ -1785,16 +1570,6 @@ dependencies = [
  "rustc_version 0.4.1",
 ]
 
-[[package]]
-name = "flatbuffers"
-version = "24.12.23"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4f1baf0dbf96932ec9a3038d57900329c015b0bfb7b63d904f3bc27e2b02a096"
-dependencies = [
- "bitflags 1.3.2",
- "rustc_version 0.4.1",
-]
-
 [[package]]
 name = "flate2"
 version = "1.1.0"
@@ -3492,7 +3267,7 @@ name = "pandora_lib_promethion"
 version = "0.1.0"
 dependencies = [
  "anyhow",
- "arrow 54.2.0",
+ "arrow",
  "bgzip",
  "blake3",
  "byte-unit",
@@ -3822,8 +3597,8 @@ version = "0.1.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "0cc67713396eed3e7de3deca3ca3fd4d8197e73d48e5323317e870ac62ccf9ad"
 dependencies = [
- "arrow 49.0.0",
- "flatbuffers 23.5.26",
+ "arrow",
+ "flatbuffers",
  "log",
  "uuid",
 ]

+ 1 - 1
Cargo.toml

@@ -28,7 +28,7 @@ lazy_static = "1.5.0"
 indicatif = "0.17.8"
 rust-htslib = "0.49.0"
 podders = "0.1.4"
-arrow = "54.2.0"
+arrow = "49.0.0"
 bgzip = "0.3.1"
 tempfile = "3.14.0"
 dashmap = { version = "6.1.0", features = ["rayon", "serde"] }