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config add promethion metadata inputs

Thomas 7 months ago
parent
commit
36370e7add
1 changed files with 2 additions and 0 deletions
  1. 2 0
      src/config.rs

+ 2 - 0
src/config.rs

@@ -81,6 +81,7 @@ pub struct Config {
     pub max_depth_low_quality: u32,
     pub max_depth_low_quality: u32,
     pub bam_composition_sample_size: u32,
     pub bam_composition_sample_size: u32,
     pub promethion_runs_metadata_dir: String,
     pub promethion_runs_metadata_dir: String,
+    pub promethion_runs_input: String,
 }
 }
 
 
 // Here comes names that can't be changed from output of tools
 // Here comes names that can't be changed from output of tools
@@ -123,6 +124,7 @@ impl Default for Config {
             bam_composition_sample_size: 20_000,
             bam_composition_sample_size: 20_000,
 
 
             promethion_runs_metadata_dir: "/data/promethion-runs-metadata".to_string(),
             promethion_runs_metadata_dir: "/data/promethion-runs-metadata".to_string(),
+            promethion_runs_input: "/data/promethion-runs-metadata/inputs.json".to_string(),
 
 
             db_cases_path: "/data/cases.sqlite".to_string(),
             db_cases_path: "/data/cases.sqlite".to_string(),