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@@ -12,11 +12,6 @@ use crate::{
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variant::vcf_variant::{Info, VcfVariant},
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};
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-
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-// TODO;
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-// handle: chr5 141739987 rs1754540290 G A . PASS GENEINFO=PCDHB13:56123;NSM;RS=1754540290;SSR=0;VC=SNV;dbSNPBuildID=155
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-
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-
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#[derive(Debug, Clone, Serialize, Deserialize, PartialEq, Encode, Decode)]
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pub struct DbSnpFreqEntry {
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pub source: String,
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@@ -192,13 +187,14 @@ pub fn annotate_dbsnp(
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None
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}
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});
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- if let Some(freq) = freq {
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- annotations.insert_update(
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- variant.hash,
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- &[Annotation::DbSnp(dv.id.clone(), freq)],
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- );
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- break;
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- }
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+ annotations.insert_update(
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+ variant.hash,
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+ &[Annotation::DbSnp(
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+ dv.id.clone(),
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+ freq.unwrap_or(DbSnpFreq(Vec::new())),
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+ )],
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+ );
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+ break;
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}
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}
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},
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