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@@ -80,6 +80,7 @@ pub struct Config {
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pub cpg_bed: String,
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pub max_depth_low_quality: u32,
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pub bam_composition_sample_size: u32,
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+ pub promethion_runs_metadata_dir: String,
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}
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// Here comes names that can't be changed from output of tools
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@@ -121,6 +122,8 @@ impl Default for Config {
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bam_n_threads: 150,
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bam_composition_sample_size: 20_000,
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+ promethion_runs_metadata_dir: "/data/promethion-runs-metadata".to_string(),
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+
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db_cases_path: "/data/cases.sqlite".to_string(),
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//
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