 Thomas
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081a1b411b
straglr somatic change
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6 months ago |
|
Thomas
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8e7e1df6bc
Update callers and config
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6 months ago |
|
Thomas
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453f3db650
stats variants
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6 months ago |
|
Thomas
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116b2d7111
vcf_variants
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6 months ago |
|
Thomas
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a020475b87
fbinv
|
6 months ago |
|
Thomas
|
25db0587a1
callers staglr
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6 months ago |
|
Thomas
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cab2f12c20
callers staglr
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6 months ago |
|
Thomas
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9db8c5ef4b
all callers implemented for slurm. testing in progress
|
6 months ago |
|
Thomas
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c0060e3f5a
callers
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6 months ago |
|
Thomas
|
b135d60d4e
callers
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6 months ago |
|
Thomas
|
901d8e4963
pipe metrics
|
6 months ago |
|
Thomas
|
848e7845ba
deep_somatic update
|
6 months ago |
|
Thomas
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5e4e7c0275
run and run_many macro
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6 months ago |
|
Thomas
|
361c8f3e6b
up
|
6 months ago |
|
Thomas
|
8b2c676daf
up
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6 months ago |
|
Thomas
|
78f31bc229
PromRun
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6 months ago |
|
Thomas
|
c331485a10
import_run update
|
6 months ago |
|
Thomas
|
a7e83647b8
ClairS update
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6 months ago |
|
Thomas
|
6c52a16a21
SamtoolsMergeMany, slurm_pipe/import upate
|
6 months ago |
|
Thomas
|
4ac495035c
ClairS upate
|
6 months ago |
|
Thomas
|
8dd3c41065
DeepVariant upate
|
6 months ago |
|
Thomas
|
0409a892e8
ClairS slurm
|
6 months ago |
|
Thomas
|
0d26c83b3e
BcfTools Slurm
|
6 months ago |
|
Thomas
|
59232e836c
Update DeepVariant for slurm
|
6 months ago |
|
Thomas
|
8e8ec39f18
Add run method
|
6 months ago |
|
Thomas
|
40524fefc7
Update runs for unligned BAM files and not only POD5
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6 months ago |
|
Thomas
|
0a1d0d4be3
Update Pod5sRun
|
6 months ago |
|
Thomas
|
403d80572c
Update Pod5sRun
|
6 months ago |
|
Thomas
|
3c19136885
Full somatic POD5s basecalling and alignment based on case_id
|
6 months ago |
|
Thomas
|
79ef966d5d
Pod5
|
6 months ago |
