 Thomas
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478f26daf0
improved BAM INS detection
|
3 months ago |
|
Thomas
|
0278ed4c64
improved somatic pipe
|
3 months ago |
|
Thomas
|
4cfdd15a5d
dict file
|
4 months ago |
|
Thomas
|
fbb733ef00
prom runs
|
4 months ago |
|
Thomas
|
955bd9fc0e
scan
|
4 months ago |
|
Thomas
|
30faf74aa1
nanomonsv MA
|
4 months ago |
|
Thomas
|
1f42f2b8ef
Pod5sFlowCell
|
5 months ago |
|
Thomas
|
708d1fefb3
INSERTION depth wrong
|
8 months ago |
|
Thomas
|
e7a639d582
somatic pipeline should run added bam modification trigger
|
10 months ago |
|
Thomas
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1698753921
somatic pipeline should run
|
10 months ago |
|
Thomas
|
3604b225cf
BND to del
|
11 months ago |
|
Thomas
|
e8b86f0d83
annot repeatmasker
|
11 months ago |
|
Thomas
|
74c6f4da7b
bam alt/depth
|
11 months ago |
|
Thomas
|
49a95012cf
Annotation::VNTR
|
1 year ago |
|
Thomas
|
a4df568492
bedrow overlaps par
|
1 year ago |
|
Thomas
|
87a576356b
filter mapq
|
1 year ago |
|
Thomas
|
c69dcf818c
filter mapq
|
1 year ago |
|
Thomas
|
86513cba22
VCF write
|
1 year ago |
|
Thomas
|
4c5672cc47
stats + callers() + bed compare
|
1 year ago |
|
Thomas
|
23d0e0ea17
Trinucleotides and Early/Late annotations
|
1 year ago |
|
Thomas
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a5880b4b84
caller bug // callers shoud run info // remove_dir_if_exists
|
1 year ago |
|
Thomas
|
03ec589273
macro and function for trait Should Run
|
1 year ago |
|
Thomas
|
0b6f1f3ffe
working scan no mem leaks because of pileup
|
1 year ago |
|
Thomas
|
980c173f72
variants rates + ncbi versions
|
1 year ago |
|
Thomas
|
9d84177b64
gz_writer + variants_stats + high depth ranges + BinCount depths + Bin depths
|
1 year ago |
|
Thomas
|
57321e6099
variant.n_cosmic()
|
1 year ago |
|
Thomas
|
e09d58cbdb
variants final stats
|
1 year ago |
|
Thomas
|
8ff2dc0b66
up alt cat
|
1 year ago |
|
Thomas
|
088093d58f
VariantsStats
|
1 year ago |
|
Thomas
|
2cd05492a7
m
|
1 year ago |
