 Thomas
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b85b028475
coral
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hai 1 día |
|
Thomas
|
d6250eeae7
coral
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hai 4 días |
|
Thomas
|
9ddb488f87
robuster epilog parsing
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hai 6 días |
|
Thomas
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22d9b9f29d
savana_mem for slurm max mem
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hai 6 días |
|
Thomas
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f216c34dce
reduced clairS threads; added slurm_max_par default: 10; use of run! and run_many! in bam import
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hai 1 semana |
|
Thomas
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27489a85bc
config;panel_bam
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hai 1 semana |
|
Thomas
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069f6f8b38
Added GATK mutect2
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hai 2 meses |
|
Thomas
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66faf6060c
upgraded jobs names with part index
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hai 3 meses |
|
Thomas
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d17bbe3ad5
limit clairs threads
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hai 3 meses |
|
Thomas
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0278ed4c64
improved somatic pipe
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hai 3 meses |
|
Thomas
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035d9d3741
config: added IGV and viz required files
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hai 3 meses |
|
Thomas
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b2f8ba29dd
config: added db_snp
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hai 3 meses |
|
Thomas
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7ba042df8d
update
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hai 3 meses |
|
Thomas
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5aabb5de5b
dict file
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hai 4 meses |
|
Thomas
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6f12252396
prom runs
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hai 4 meses |
|
Thomas
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fbb733ef00
prom runs
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hai 4 meses |
|
Thomas
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c3b5e356bf
echtvar
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hai 4 meses |
|
Thomas
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30faf74aa1
nanomonsv MA
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hai 4 meses |
|
Thomas
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244ff9366f
nanomonsv MA
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hai 4 meses |
|
Thomas
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081a1b411b
straglr somatic change
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hai 4 meses |
|
Thomas
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8e7e1df6bc
Update callers and config
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hai 4 meses |
|
Thomas
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a020475b87
fbinv
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hai 4 meses |
|
Thomas
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9db8c5ef4b
all callers implemented for slurm. testing in progress
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hai 4 meses |
|
Thomas
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b135d60d4e
callers
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hai 4 meses |
|
Thomas
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848e7845ba
deep_somatic update
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hai 4 meses |
|
Thomas
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5e4e7c0275
run and run_many macro
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hai 4 meses |
|
Thomas
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8b2c676daf
up
|
hai 4 meses |
|
Thomas
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78f31bc229
PromRun
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hai 4 meses |
|
Thomas
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6c52a16a21
SamtoolsMergeMany, slurm_pipe/import upate
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hai 4 meses |
|
Thomas
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8dd3c41065
DeepVariant upate
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hai 4 meses |
