 Thomas
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0278ed4c64
improved somatic pipe
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hai 2 semanas |
|
Thomas
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035d9d3741
config: added IGV and viz required files
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hai 3 semanas |
|
Thomas
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b2f8ba29dd
config: added db_snp
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hai 3 semanas |
|
Thomas
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7ba042df8d
update
|
hai 3 semanas |
|
Thomas
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5aabb5de5b
dict file
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hai 1 mes |
|
Thomas
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6f12252396
prom runs
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hai 1 mes |
|
Thomas
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fbb733ef00
prom runs
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hai 1 mes |
|
Thomas
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c3b5e356bf
echtvar
|
hai 1 mes |
|
Thomas
|
30faf74aa1
nanomonsv MA
|
hai 1 mes |
|
Thomas
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244ff9366f
nanomonsv MA
|
hai 1 mes |
|
Thomas
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081a1b411b
straglr somatic change
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hai 1 mes |
|
Thomas
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8e7e1df6bc
Update callers and config
|
hai 1 mes |
|
Thomas
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a020475b87
fbinv
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hai 1 mes |
|
Thomas
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9db8c5ef4b
all callers implemented for slurm. testing in progress
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hai 1 mes |
|
Thomas
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b135d60d4e
callers
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hai 1 mes |
|
Thomas
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848e7845ba
deep_somatic update
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hai 1 mes |
|
Thomas
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5e4e7c0275
run and run_many macro
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hai 1 mes |
|
Thomas
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8b2c676daf
up
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hai 1 mes |
|
Thomas
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78f31bc229
PromRun
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hai 1 mes |
|
Thomas
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6c52a16a21
SamtoolsMergeMany, slurm_pipe/import upate
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hai 1 mes |
|
Thomas
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8dd3c41065
DeepVariant upate
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hai 1 mes |
|
Thomas
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0409a892e8
ClairS slurm
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hai 2 meses |
|
Thomas
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0d26c83b3e
BcfTools Slurm
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hai 2 meses |
|
Thomas
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59232e836c
Update DeepVariant for slurm
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hai 2 meses |
|
Thomas
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3c19136885
Full somatic POD5s basecalling and alignment based on case_id
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hai 2 meses |
|
Thomas
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ba99b771cc
rm collections
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hai 2 meses |
|
Thomas
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4de4f971fe
In the CLUSTER !!!
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hai 2 meses |
|
Thomas
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89fea92bf5
config toml
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hai 2 meses |
