src/callers/mod.rs

@@ -292,7 +292,7 @@ pub fn run_chunkeds(id: &str, config: &Config) -> anyhow::Result<()> {
     DeepVariant::initialize(id, &config.tumoral_name, config)?.run()?;
 
     // Straglr - Short Tandem Repeat (STR) genotyper
-    Straglr::initialize(id, config)?.run()
+    // Straglr::initialize(id, config)?.run()
 }
 
 #[cfg(test)]

src/callers/straglr.rs

@@ -751,7 +751,7 @@ impl SlurmRunner for StraglrJob {
         SlurmParams {
             job_name: Some(job_name),
             partition: Some("shortq".into()),
-            cpus_per_task: Some(20),
+            cpus_per_task: Some(10),
             mem: Some("10G".into()),
             gres: None,
         }
@@ -765,7 +765,7 @@ impl SbatchRunner for StraglrJob {
         SlurmParams {
             job_name: Some(job_name),
             partition: Some("shortq".into()),
-            cpus_per_task: Some(20),
+            cpus_per_task: Some(10),
             mem: Some("10G".into()),
             gres: None,
         }