Thomas/pandora_lib_promethion @ 1fcf1c5c22f6f27b1f25608d5c33d85316d53476

STEIMLE Thomas 1fcf1c5c22 Apply formatting cleanup		hai 2 semanas
..
aligner	7abe30225b ok	hai 1 mes
annotation	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
callers	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
collection	87009c3474 Add Pandora SomaticPipe output container	hai 2 semanas
commands	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
de_novo	4bbbc66981 Introducing new executor that takes a Vec<Vec<AnyJob>> and treat the inner vec as a sequence.jobs_seq![..] helps to define this sequence from any job that implement LocalRunner and SbatchRunner. ClairS implementation and new resume chunked (TODO: add clairs_allow_resume in config.	hai 1 mes
functions	7abe30225b ok	hai 1 mes
io	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
pipes	52d9e6486b Add block-compressed Pandora variant index	hai 2 semanas
scan	7abe30225b ok	hai 1 mes
uniqueness	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
variant	4bbbc66981 Introducing new executor that takes a Vec<Vec<AnyJob>> and treat the inner vec as a sequence.jobs_seq![..] helps to define this sequence from any job that implement LocalRunner and SbatchRunner. ClairS implementation and new resume chunked (TODO: add clairs_allow_resume in config.	hai 1 mes
config.rs	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
helpers.rs	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
lib.rs	1fcf1c5c22 Apply formatting cleanup	hai 2 semanas
locker.rs	7ba042df8d update	hai 5 meses
math.rs	7abe30225b ok	hai 1 mes
positions.rs	7abe30225b ok	hai 1 mes
runners.rs	871e6e4129 scan	hai 1 mes
slurm_helpers.rs	7abe30225b ok	hai 1 mes
vcf_reader.rs	e55bc1d745 ditch csv crate from all non-serde paths	hai 1 mes