Thomas/pandora_lib_promethion @ 43eef222eb2822db68dd752d03a5ea0f23b9615b - Gogs

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Thomas 43eef222eb error handling		1 gadu atpakaļ
src	43eef222eb error handling	1 gadu atpakaļ
.gitignore	494efb6235 run	1 gadu atpakaļ
Cargo.lock	63c5922d5d todo_variants_agg tested	1 gadu atpakaļ
Cargo.toml	f56aa5599c todo_variants_agg	1 gadu atpakaļ
README.md	bf79d554e2 up bcftools	1 gadu atpakaļ

Install

Dependencies

For building required HTSlib:

sudo apt install cmake libclang-dev

minimap2
(samtools)[https://www.htslib.org/download/]
(dorado)[https://github.com/nanoporetech/dorado]
(bcftools)[https://www.htslib.org/download/]
(modkit)[https://github.com/nanoporetech/modkit]
VEP: cf pandora_lib_variants for VEP install

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