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- ##fileformat=VCFv4.2
- #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMPLE
- chr1 718094 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:5,10,0
- chr1 718795 . C T 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:6,9,0
- chr1 720052 . G A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,12,0
- chr1 720430 . T C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:6:4,2:0.33333:small_model:10,0,33
- chr1 721026 . C T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,6:1.00000:deepvariant:12,6,0
- chr1 721097 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:2,3,0
- chr1 721133 . C T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,14,0
- chr1 860760 . C G 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:15,4,0
- chr1 860820 . T C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,9,0
- chr1 860823 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,9,0
- chr1 1647138 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:8,2:0.20000:deepvariant:4,0,25
- chr1 1647273 . C T 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:8:6,2:0.25000:small_model:20,0,43
- chr1 2111662 . C T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:10:7,2:0.20000:small_model:15,0,39
- chr1 2111701 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:10:8,2:0.20000:small_model:10,0,36
- chr1 2131334 . A C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:15:11,3:0.20000:small_model:8,0,31
- chr1 2139023 . G A 13.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:13:36:28,8:0.22222:12,22,0
- chr1 2166227 . G T 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:15:4,7:0.46667:deepvariant:18,0,17
- chr1 2170504 . G A 11.069 PASS FAU=5;FCU=0;FGU=8;FTU=0;RAU=3;RCU=0;RGU=14;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:30:0.2667:0,8:0:16:0,0:8:0:22:0:0:0:16:0
- chr1 2179525 . A G 8.229 PASS H;FAU=7;FCU=0;FGU=3;FTU=0;RAU=6;RCU=0;RGU=2;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:18:0.2778:0,5:0:8:0,0:13:0:5:0:8:0:0:0
- chr1 2225000 . A C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,6:0.50000:deepvariant:10,34,0
- chr1 2225320 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,20,0
- chr1 2225369 . G A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:5:2,3:0.60000:small_model:12,0,14
- chr1 2225470 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:0,15,0
- chr1 2225489 . T C 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,4:0.66667:small_model:17,10,0
- chr1 2225529 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,3:0.50000:deepvariant:1,14,0
- chr1 2225569 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:2,10,0
- chr1 2360343 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:3,6:0.60000:deepvariant:3,0,4
- chr1 2451138 . T A 27.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:26,14,0
- chr1 4927294 . T C 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:17:12,5:0.29412:small_model:18,0,98
- chr1 5502760 . C G 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:9:0,8:0.88889:small_model:19,19,0
- chr1 8704936 . G A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:5:3,2:0.40000:small_model:11,0,24
- chr1 11718410 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:0,10:1.00000:deepvariant:0,0,15
- chr1 12501278 . G T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:34:26,8:0.23529:deepvariant:5,0,21
- chr1 12502244 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:10:35:18,17:0.48571:10,21,0
- chr1 12502648 . C T 28.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:28:32:18,14:0.43750:28,34,0
- chr1 12502748 . G C 9.784 PASS H;FAU=0;FCU=7;FGU=8;FTU=0;RAU=0;RCU=8;RGU=9;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:32:0.4688:0,15:0:10:0,0:0:15:17:0:0:0:10:0
- chr1 16092717 . C G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:46:33,13:0.28261:deepvariant:4,0,16
- chr1 16092929 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:49:36,13:0.26531:deepvariant:3,0,18
- chr1 16093035 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:49:35,14:0.28571:deepvariant:3,0,14
- chr1 16093091 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:50:35,15:0.30000:deepvariant:2,0,14
- chr1 16093307 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:51:34,17:0.33333:deepvariant:4,0,13
- chr1 16093358 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:51:36,15:0.29412:deepvariant:6,0,15
- chr1 16093692 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:46:32,14:0.30435:deepvariant:4,0,16
- chr1 16316777 . C A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:31:19,12:0.38710:deepvariant:10,0,9
- chr1 17166151 . G T 29.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:1,2:0.66667:small_model:29,12,0
- chr1 17166153 . A G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,2:0.66667:small_model:12,13,0
- chr1 17166185 . G T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:2,2:0.50000:deepvariant:2,17,0
- chr1 17166187 . A G 31.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,3:0.75000:small_model:31,17,0
- chr1 17166206 . T A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:4:2,2:0.50000:small_model:14,0,21
- chr1 17166246 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,13,0
- chr1 28898092 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,16,0
- chr1 28898110 . G C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr1 28898118 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,14,0
- chr1 28898129 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,13,0
- chr1 30500495 . C T 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr1 30500519 . C T 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:16,15,0
- chr1 30500538 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,12,0
- chr1 30500559 . C A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:3:1,2:0.66667:small_model:10,0,16
- chr1 30500560 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:0,0,1
- chr1 30500616 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:2,2:0.50000:deepvariant:0,0,0
- chr1 30500617 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:2,2:0.50000:deepvariant:0,0,1
- chr1 31284340 . T C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:5,6:0.54545:small_model:10,0,17
- chr1 31287409 . T C 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:12:2,10:0.41667:deepvariant:5,6,0
- chr1 31287445 . C G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:1:14:5,9:0.21429:deepvariant:1,3,3
- chr1 31287454 . C G 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:14:3,11:0.28571:deepvariant:11,14,1
- chr1 31289038 . G C 37 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:9:0,9:0.22222:deepvariant:36,44,19
- chr1 32521602 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:21:15,6:0.28571:small_model:11,0,35
- chr1 36992324 . G A 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:8:5,3:0.37500:small_model:20,0,36
- chr1 36992326 . G A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:8:5,3:0.37500:small_model:15,0,29
- chr1 51865117 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,17,0
- chr1 51865154 . G T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,21,0
- chr1 51865166 . G A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,22,0
- chr1 51865174 . C G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,19,0
- chr1 54341887 . T G 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,14,0
- chr1 62016224 . T C 37.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:36:17:6,11:0.64706:small_model:37,0,41
- chr1 70612696 . T C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:2:0,2:1.00000:small_model:0,21,6
- chr1 75723878 . A G 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:7,8,0
- chr1 76854182 . A G 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:17:12,4:0.23529:small_model:20,0,51
- chr1 86668791 . C A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:23:11,11:0.47826:small_model:9,0,24
- chr1 86668793 . C A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:23:11,12:0.52174:small_model:10,0,23
- chr1 87294506 . G A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:17,17,0
- chr1 90085110 . G A 25.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:14:10,4:0.28571:small_model:25,0,47
- chr1 110130809 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:11:9,2:0.18182:small_model:14,0,38
- chr1 116446343 . C T 13.858 PASS FAU=0;FCU=4;FGU=0;FTU=3;RAU=0;RCU=7;RGU=0;RTU=2 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:16:0.3125:0,5:0:13:0,0:0:11:0:5:0:13:0:0
- chr1 121666015 . A T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:18:10,8:0.44444:deepvariant:8,0,10
- chr1 121666235 . C T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:20:10,10:0.50000:deepvariant:10,0,15
- chr1 121810408 . T G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:15,6:0.27273:deepvariant:1,0,12
- chr1 121810596 . T G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:23:13,9:0.39130:deepvariant:3,0,7
- chr1 122375880 . G T 30.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,3:0.50000:deepvariant:28,41,0
- chr1 122657780 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:0,4:0.66667:deepvariant:4,16,0
- chr1 122830774 . C G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:8,18,0
- chr1 122896044 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,20,0
- chr1 122896283 . G C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,21,0
- chr1 123067567 . G T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:10:3,7:0.70000:small_model:8,18,0
- chr1 123067589 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:10:3,7:0.70000:small_model:11,21,0
- chr1 123088535 . C G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,2:0.50000:deepvariant:7,11,0
- chr1 123129160 . G T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:4,16,0
- chr1 123129264 . T C 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,14,0
- chr1 123311901 . C T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:1,5:0.83333:small_model:12,14,0
- chr1 123312299 . T C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:deepvariant:13,12,0
- chr1 123588643 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,15,0
- chr1 123588727 . G C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,21,0
- chr1 123588810 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,13,0
- chr1 123588845 . C T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:14,13,0
- chr1 123588925 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr1 123588949 . C A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,18,0
- chr1 123588962 . G T 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,17,0
- chr1 123589011 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr1 123589025 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,22,0
- chr1 123589044 . T A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,15,0
- chr1 123589080 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,20,0
- chr1 124285502 . C G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,4:0.80000:small_model:15,22,0
- chr1 124595364 . G A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr1 124597957 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:0,11,0
- chr1 124689383 . A G 29.5 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:12:7:0,3:0.42857:deepvariant:29,37,11
- chr1 125542433 . G C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,29,0
- chr1 125549584 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:2,20,0
- chr1 125549607 . T G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,19,0
- chr1 125556348 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr1 125556438 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,19,0
- chr1 125566101 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:8:4,4:0.50000:deepvariant:0,0,2
- chr1 125616518 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,10,0
- chr1 125616608 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,17,0
- chr1 125616966 . C G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:small_model:9,17,0
- chr1 126565584 . T A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:12,5:0.27778:deepvariant:4,0,11
- chr1 126677746 . G T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:1,4:0.80000:deepvariant:6,0,1
- chr1 126677803 . G A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:1,4:0.80000:deepvariant:7,0,2
- chr1 126677858 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:5:1,4:0.80000:deepvariant:3,0,0
- chr1 126692447 . C T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:3,2:0.40000:deepvariant:2,0,5
- chr1 127140723 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,10,0
- chr1 127145142 . G A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,23,0
- chr1 127246861 . A G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr1 127246898 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr1 127249577 . C G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,23,0
- chr1 127348938 . T G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:5,12,0
- chr1 127412438 . G C 39.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:8:0,8:0.37500:deepvariant:39,50,13
- chr1 127575677 . T G 60.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:32:12:0,7:0.58333:deepvariant:60,58,0
- chr1 127610854 . C G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,21,0
- chr1 127622485 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr1 127652565 . G A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:2,4:0.66667:deepvariant:9,14,0
- chr1 127674058 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,20,0
- chr1 127678438 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:1,7,0
- chr1 127678439 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,5:0.83333:deepvariant:3,8,0
- chr1 127690788 . T A 54.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:53:8:0,6:0.75000:small_model:54,57,0
- chr1 127690854 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:4,4:0.50000:deepvariant:0,8,0
- chr1 127690867 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,4:0.66667:deepvariant:4,13,0
- chr1 127690878 . A T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:3,4:0.57143:deepvariant:5,17,0
- chr1 127690898 . A T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:7:3,4:0.57143:deepvariant:7,21,0
- chr1 127690946 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:0,20,0
- chr1 127690951 . T C 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:7:0,7:1.00000:small_model:21,21,0
- chr1 127690986 . G C 69.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:47:6:0,6:1.00000:small_model:72,46,0
- chr1 127691072 . A C 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:7:0,7:1.00000:small_model:19,31,0
- chr1 127691079 . C T 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:3:0,3:1.00000:small_model:21,32,0
- chr1 127691106 . G C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,35,0
- chr1 127691136 . G C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:7:1,6:0.85714:deepvariant:7,22,0
- chr1 127691156 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:2,12,0
- chr1 127691173 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:3,4:0.57143:deepvariant:3,16,0
- chr1 127691182 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,3:0.50000:deepvariant:0,16,0
- chr1 127691202 . C G 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:5,2:0.28571:small_model:20,0,58
- chr1 127691207 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,3:0.42857:deepvariant:1,14,0
- chr1 127691222 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,5:0.71429:deepvariant:0,12,0
- chr1 127691327 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:7:2,5:0.71429:deepvariant:9,18,0
- chr1 127691341 . G C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,6:0.85714:deepvariant:4,10,0
- chr1 127691353 . C A 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:7:0,6:0.85714:small_model:22,23,0
- chr1 127691362 . A C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:7:0,7:1.00000:small_model:14,21,0
- chr1 127691372 . A G 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,4:0.66667:small_model:6,14,0
- chr1 127691374 . A G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,4:0.66667:deepvariant:14,19,0
- chr1 127691376 . C T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:2,4:0.66667:deepvariant:12,19,0
- chr1 127691381 . T C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:deepvariant:13,21,0
- chr1 127691391 . T A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,4:0.66667:deepvariant:14,17,0
- chr1 127691474 . G A 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,4:0.66667:deepvariant:7,15,0
- chr1 127691492 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:10,25,0
- chr1 127691507 . A C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:13,19,0
- chr1 127691534 . C G 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,4:0.66667:deepvariant:22,18,0
- chr1 127691540 . T C 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:2,4:0.66667:deepvariant:20,17,0
- chr1 127691559 . A T 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:13,16,0
- chr1 127691571 . C A 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:2,4:0.66667:deepvariant:18,16,0
- chr1 127691588 . T G 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,4:0.66667:small_model:17,20,0
- chr1 127691594 . G T 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:deepvariant:18,20,0
- chr1 127691618 . A G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:2,3:0.60000:deepvariant:8,18,0
- chr1 127691664 . G T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,19,0
- chr1 127691671 . C A 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:2,3:0.60000:deepvariant:6,15,0
- chr1 127691689 . A T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:11,17,0
- chr1 127691692 . T C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:deepvariant:17,20,0
- chr1 127691696 . C T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:2,3:0.60000:deepvariant:13,18,0
- chr1 127691706 . T G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,3:0.60000:small_model:10,20,0
- chr1 127691709 . T C 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:2,3:0.60000:deepvariant:12,19,0
- chr1 127691774 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,13,0
- chr1 127691786 . G C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,4:0.80000:deepvariant:7,17,0
- chr1 127691835 . C T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:16,14,0
- chr1 127691882 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:4,20,0
- chr1 127691916 . G C 33 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:30:5:0,5:1.00000:small_model:32,33,0
- chr1 127691918 . C A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,4:0.80000:deepvariant:5,21,0
- chr1 127692010 . A C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,3:0.75000:deepvariant:4,21,0
- chr1 127692026 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,3:0.75000:deepvariant:0,20,0
- chr1 127692043 . A T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:2,22,0
- chr1 127692051 . A C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:5,22,0
- chr1 127692071 . G C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,3:0.75000:deepvariant:4,22,0
- chr1 127692108 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:9,23,0
- chr1 127692118 . A T 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:17,22,0
- chr1 127692147 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:deepvariant:10,23,0
- chr1 127692159 . A T 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:17,22,0
- chr1 127692192 . C A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,3:0.75000:deepvariant:7,20,0
- chr1 127692250 . G C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,20,0
- chr1 127692257 . T A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,18,0
- chr1 127692312 . T A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,17,0
- chr1 127694559 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:6,2:0.25000:deepvariant:2,15,0
- chr1 127694934 . T G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:10:1,2:0.20000:small_model:3,12,0
- chr1 127833989 . T C 29.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:23:14,9:0.39130:small_model:29,0,34
- chr1 127978159 . C T 19.118 PASS H;FAU=0;FCU=3;FGU=0;FTU=4;RAU=0;RCU=3;RGU=0;RTU=6 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:19:16:0.625:0,10:0:12:0,0:0:6:0:10:0:12:0:0
- chr1 128151054 . T C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:15:8,7:0.46667:small_model:13,0,98
- chr1 128354553 . C A 10.198 PASS H;FAU=3;FCU=9;FGU=0;FTU=0;RAU=1;RCU=15;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:10:28:0.1429:0,4:0:17:0,0:4:24:0:0:0:17:0:0
- chr1 128385172 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:18:15,3:0.16667:deepvariant:6,0,35
- chr1 128385236 . A G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:20:17,3:0.15000:small_model:13,0,39
- chr1 128424846 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:14,6:0.30000:deepvariant:0,0,26
- chr1 128425091 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:11,6:0.33333:deepvariant:0,0,24
- chr1 128425156 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:11,6:0.33333:deepvariant:1,0,25
- chr1 128438303 . G C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:9,2:0.18182:deepvariant:5,0,29
- chr1 128438737 . T C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:8,4:0.33333:small_model:13,0,34
- chr1 128438800 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:10,2:0.16667:deepvariant:1,0,18
- chr1 128438813 . G A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:12:8,4:0.33333:small_model:11,0,30
- chr1 128579314 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,7,0
- chr1 128620017 . C G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:9:3:0,3:1.00000:small_model:0,26,13
- chr1 128681700 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr1 128681701 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,37,0
- chr1 128681733 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,20,0
- chr1 128681778 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr1 128681779 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr1 128681788 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr1 128682859 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,22,0
- chr1 128682863 . T A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,29,0
- chr1 128682880 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,17,0
- chr1 128682881 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr1 128682887 . T A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,19,0
- chr1 128682889 . A G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr1 128682892 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,17,0
- chr1 128682894 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,17,0
- chr1 128682899 . T G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,21,0
- chr1 128682905 . G A 34.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:3:0,3:1.00000:small_model:34,25,0
- chr1 128682921 . A C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,22,0
- chr1 128682923 . T A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,22,0
- chr1 128682924 . A G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,20,0
- chr1 128682929 . C G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,3:0.75000:deepvariant:3,19,0
- chr1 128682935 . G T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:3,19,0
- chr1 128682937 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,19,0
- chr1 128682945 . A C 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,3:0.75000:small_model:15,19,0
- chr1 128682972 . A G 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:19,15,0
- chr1 128682984 . C G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,18,0
- chr1 128682985 . T G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,4:0.66667:deepvariant:10,19,0
- chr1 128682989 . A G 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:deepvariant:12,21,0
- chr1 128683010 . G A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,16,0
- chr1 128683014 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:deepvariant:9,22,0
- chr1 128683017 . A G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:deepvariant:12,21,0
- chr1 128683020 . G A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:deepvariant:9,20,0
- chr1 128683023 . A T 25 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:6:0,6:1.00000:small_model:25,27,0
- chr1 128683033 . T A 71.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:52:6:0,6:1.00000:small_model:72,52,0
- chr1 128683037 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,6:1.00000:deepvariant:2,14,0
- chr1 128683039 . T G 44.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:29:6:0,6:1.00000:small_model:44,28,0
- chr1 128683042 . T G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:11,29,0
- chr1 128683047 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,6:1.00000:deepvariant:3,16,0
- chr1 128683049 . G T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:2,13,0
- chr1 128735635 . C A 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:17,11,0
- chr1 128735701 . T C 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:16,12,0
- chr1 128735702 . G A 21.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:1,2:0.66667:small_model:21,10,0
- chr1 128735779 . T C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:10,19,0
- chr1 128735783 . G C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,19,0
- chr1 128735797 . T G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr1 128735799 . A T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,20,0
- chr1 128735804 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr1 128735969 . C G 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:23,10,0
- chr1 128736010 . A T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,20,0
- chr1 128736019 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,17,0
- chr1 128736025 . A T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,2:0.66667:deepvariant:7,18,0
- chr1 128736072 . T A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,15,0
- chr1 128738424 . C A 47.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:4:0,4:0.50000:deepvariant:47,57,24
- chr1 128739083 . T A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,18,0
- chr1 128739230 . T C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr1 128739236 . G A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr1 128739246 . A C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:5,19,0
- chr1 128739251 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,18,0
- chr1 128739445 . T G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,18,0
- chr1 128740151 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:1,2:0.33333:small_model:7,10,0
- chr1 128745352 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:20:7,5:0.25000:deepvariant:1,10,0
- chr1 128833884 . G T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:32:20,12:0.37500:deepvariant:7,0,21
- chr1 128946503 . C G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:8:0,7:0.25000:deepvariant:10,3,8
- chr1 129045712 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:2,10:0.83333:deepvariant:0,21,0
- chr1 129045805 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:0,17,0
- chr1 129045833 . G A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:13,19,0
- chr1 129047572 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,12,0
- chr1 129047577 . G A 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:18,20,0
- chr1 129053394 . A G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,23,0
- chr1 129057085 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:25:8,17:0.68000:deepvariant:6,13,0
- chr1 129076538 . T C 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:10:2,8:0.80000:deepvariant:13,9,0
- chr1 129076949 . G A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:1,5:0.83333:deepvariant:13,20,0
- chr1 129233414 . A G 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:15,12,0
- chr1 129241337 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:4,6:0.60000:deepvariant:2,7,0
- chr1 129241379 . T C 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:10:2,8:0.80000:small_model:15,24,0
- chr1 129321865 . A G 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:15,20,0
- chr1 129321870 . G A 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,5:1.00000:small_model:18,23,0
- chr1 129339154 . G A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,16,0
- chr1 129342292 . G A 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,15,0
- chr1 129342532 . T C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,14,0
- chr1 129342629 . C G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,14,0
- chr1 129342715 . A G 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:8,8,0
- chr1 129342829 . G C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:7,14,0
- chr1 129342852 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,16,0
- chr1 129342893 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,17,0
- chr1 129343002 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:5,15,0
- chr1 129343011 . A G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,3:0.75000:deepvariant:7,17,0
- chr1 129343053 . T C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:5,15,0
- chr1 129343118 . C G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,17,0
- chr1 129343120 . T A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,17,0
- chr1 129356992 . T A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,17,0
- chr1 129379126 . T C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:0,5:0.71429:deepvariant:9,20,0
- chr1 129404639 . C T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,32,0
- chr1 129406322 . A C 21.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:21,21,0
- chr1 129433957 . G A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:12:2,10:0.83333:deepvariant:8,9,0
- chr1 129525508 . T C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr1 129526525 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:5,7,0
- chr1 129526921 . T A 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:22,24,0
- chr1 129527100 . T A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,8,0
- chr1 129527186 . T A 21.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:21,28,0
- chr1 129529077 . C T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:2,3:0.60000:deepvariant:4,0,5
- chr1 129529290 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:3,3:0.50000:deepvariant:3,0,7
- chr1 129529685 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:0,0,5
- chr1 129862730 . C T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,20,0
- chr1 129862860 . C A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,14,0
- chr1 129863133 . G C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,13,0
- chr1 129900294 . A G 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:2,5:0.71429:small_model:12,80,0
- chr1 129924895 . C T 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:0,6:0.50000:deepvariant:17,37,0
- chr1 130071399 . A C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:16:1,12:0.75000:deepvariant:9,8,0
- chr1 130085119 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:6,4:0.36364:deepvariant:2,0,12
- chr1 130087412 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:2,1,0
- chr1 130087877 . G C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,13,0
- chr1 130088071 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr1 130149774 . G T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:1,0,9
- chr1 130150565 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:3,3:0.50000:deepvariant:3,0,5
- chr1 130151267 . A G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:12:1,11:0.91667:small_model:15,26,0
- chr1 130164502 . C A 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:4,5:0.55556:deepvariant:6,0,5
- chr1 130183767 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr1 130183784 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr1 130183788 . G T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr1 130184865 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:3,5,0
- chr1 130242936 . T C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:2,6:0.75000:deepvariant:5,14,0
- chr1 130272190 . C G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:2,0,11
- chr1 130272955 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:5,16,0
- chr1 130278924 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:0,4,0
- chr1 130279025 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:4,4:0.50000:deepvariant:3,0,7
- chr1 130279298 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:4,4:0.50000:deepvariant:1,0,6
- chr1 130481060 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr1 130481063 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr1 130481071 . A C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,20,0
- chr1 130500476 . T A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,31,0
- chr1 130500488 . G C 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,29,0
- chr1 130604233 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr1 130604432 . T A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,22,0
- chr1 130604489 . T C 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,19,0
- chr1 130604540 . G T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr1 130604622 . G A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,21,0
- chr1 130604623 . A T 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:19,24,0
- chr1 130664065 . A T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,27,0
- chr1 130757131 . T C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:10:2,8:0.80000:small_model:10,13,0
- chr1 130757145 . A G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:9:1,8:0.88889:small_model:12,23,0
- chr1 130757790 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:2,0,9
- chr1 130855950 . T C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,35,0
- chr1 131036601 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:0,4,0
- chr1 131193750 . T A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:4,15,0
- chr1 131193896 . T A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:5,17,0
- chr1 131470736 . T C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,18,0
- chr1 131470743 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr1 131470764 . A C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:3,19,0
- chr1 131477071 . T C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,5:0.71429:deepvariant:10,22,0
- chr1 131496154 . C T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,6:1.00000:deepvariant:6,21,0
- chr1 131566643 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,21,0
- chr1 131615831 . A T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:1,3:0.75000:deepvariant:2,0,1
- chr1 131725949 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,20,0
- chr1 131725975 . T C 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,26,0
- chr1 131726086 . C T 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:18,24,0
- chr1 131728053 . C A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:small_model:9,24,0
- chr1 131729738 . C A 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:21,23,0
- chr1 131729775 . T A 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:19,24,0
- chr1 131729792 . A G 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:20,24,0
- chr1 131809925 . T A 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:7:0,7:1.00000:small_model:25,29,0
- chr1 131884427 . G C 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,2:0.50000:deepvariant:16,39,2
- chr1 131885639 . T A 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,26,0
- chr1 131926725 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:2,5:0.71429:deepvariant:0,3,0
- chr1 131927407 . G T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,16,0
- chr1 131927445 . G C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,2:0.66667:deepvariant:6,17,0
- chr1 131975555 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:2,6:0.75000:deepvariant:4,8,0
- chr1 131975645 . T A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,6:0.85714:deepvariant:12,13,0
- chr1 131997481 . C A 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,39,0
- chr1 132106611 . A C 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,27,0
- chr1 132106634 . T C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,3:0.75000:deepvariant:6,18,0
- chr1 132111075 . G C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:10:0,5:0.50000:deepvariant:9,14,0
- chr1 132159829 . T C 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,23,0
- chr1 132160089 . T A 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:18,32,0
- chr1 132161261 . A C 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,3:0.60000:deepvariant:6,5,0
- chr1 132163329 . A G 24.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:9:0,9:1.00000:small_model:24,30,0
- chr1 132208713 . A C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:3,9,0
- chr1 132208825 . A G 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,22,0
- chr1 132237864 . T C 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:22,22,0
- chr1 132300672 . T G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:6,7:0.53846:deepvariant:1,0,8
- chr1 132300757 . G A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:5,9:0.64286:deepvariant:5,0,12
- chr1 132350676 . G T 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,2:0.50000:deepvariant:17,20,2
- chr1 132355046 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:4,17,0
- chr1 132356050 . A G 23.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:3:0,3:1.00000:small_model:23,33,0
- chr1 132401544 . T A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:1,4:0.80000:deepvariant:6,0,1
- chr1 132402213 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:1,6:0.85714:small_model:10,20,0
- chr1 132408958 . A G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:4,5:0.55556:deepvariant:7,0,9
- chr1 132410222 . C G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:12:1,11:0.91667:small_model:14,19,0
- chr1 132412078 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:0,0,4
- chr1 132412481 . A C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:6,5:0.45454:deepvariant:1,0,8
- chr1 132461911 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:17:6,11:0.64706:deepvariant:0,5,0
- chr1 132488184 . T G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:1,6:0.85714:small_model:13,27,0
- chr1 132488190 . C T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:1,6:0.85714:small_model:10,27,0
- chr1 132488191 . A C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,5:0.71429:small_model:15,32,0
- chr1 132715483 . T A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,22,0
- chr1 132716432 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr1 132716451 . C T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,21,0
- chr1 132716467 . C A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,20,0
- chr1 132716489 . T A 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,21,0
- chr1 132716504 . T A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,19,0
- chr1 132716521 . A G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,18,0
- chr1 132716591 . T A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,19,0
- chr1 132716599 . A T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,24,0
- chr1 132716709 . T A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,21,0
- chr1 132721051 . T C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:17,16,0
- chr1 132819752 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:3,6,0
- chr1 132819789 . T C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:4,15,0
- chr1 132819869 . C G 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:21,22,0
- chr1 132952595 . C A 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:24,22,0
- chr1 133058618 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:16:7,9:0.56250:deepvariant:0,0,3
- chr1 133072377 . T A 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,24,0
- chr1 133072522 . T C 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,26,0
- chr1 133073247 . G A 27.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:0.40000:deepvariant:26,36,6
- chr1 133089482 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:2,7:0.77778:deepvariant:2,3,0
- chr1 133310038 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:8,14,0
- chr1 133322895 . A T 26 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:7:0,7:1.00000:small_model:26,28,0
- chr1 133420781 . A G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:3,6:0.66667:deepvariant:7,0,4
- chr1 133420843 . A G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:4,5:0.55556:deepvariant:4,0,6
- chr1 133420939 . A T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:2,2,0
- chr1 133420952 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:2,5:0.71429:deepvariant:1,2,0
- chr1 133421042 . C G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:2,5:0.71429:small_model:9,17,0
- chr1 133478834 . T C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:2,5:0.71429:deepvariant:4,11,0
- chr1 133498771 . A C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,28,0
- chr1 133586255 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,16,0
- chr1 133588242 . A C 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,29,0
- chr1 133708860 . T A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:12,35,0
- chr1 133708913 . T A 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:19,28,0
- chr1 133708919 . C T 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:18,32,0
- chr1 133733695 . G C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr1 133814742 . A T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,18,0
- chr1 133903792 . A C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,19,0
- chr1 133951426 . A T 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:17,15,0
- chr1 134034495 . A T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:6,7,0
- chr1 134034507 . C G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:2,5,0
- chr1 134043823 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,18,0
- chr1 134044015 . G A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,19,0
- chr1 134044050 . C A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:small_model:8,20,0
- chr1 134044072 . T A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:small_model:8,27,0
- chr1 134044087 . T A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:deepvariant:8,20,0
- chr1 134044104 . A G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,27,0
- chr1 134137118 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,14,0
- chr1 134151694 . A C 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,25,0
- chr1 134151717 . T C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,23,0
- chr1 134205507 . A T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:10:1,9:0.90000:small_model:17,26,0
- chr1 134209309 . T G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,18,0
- chr1 134248356 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:1,4:0.80000:deepvariant:0,3,0
- chr1 134260109 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,20,0
- chr1 134260126 . T A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,36,0
- chr1 134260144 . A T 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,32,0
- chr1 134260230 . T C 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,19,0
- chr1 134260254 . A T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,2:0.66667:deepvariant:7,18,0
- chr1 134260257 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,17,0
- chr1 134260329 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,15,0
- chr1 134302286 . T A 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:20,29,0
- chr1 134302965 . T C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,16,0
- chr1 134333087 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,16,0
- chr1 134352203 . A G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,27,0
- chr1 134438919 . C T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:2,5:0.71429:deepvariant:5,16,0
- chr1 134439342 . T C 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:2,3:0.60000:small_model:12,26,0
- chr1 134449441 . T A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,24,0
- chr1 134449500 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,20,0
- chr1 134454170 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,10,0
- chr1 134459007 . T A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:2,5:0.71429:deepvariant:3,13,0
- chr1 134498435 . A C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,20,0
- chr1 134611998 . G T 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:12:0,10:0.83333:small_model:20,27,0
- chr1 134611999 . A C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:12:2,9:0.75000:small_model:8,31,0
- chr1 134612047 . A T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:11:3,8:0.72727:small_model:11,31,0
- chr1 134612051 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:2,9:0.81818:deepvariant:2,10,0
- chr1 134612146 . A C 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,28,0
- chr1 134612169 . T C 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:17,28,0
- chr1 134612319 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:14:3,11:0.78571:small_model:10,25,0
- chr1 134612343 . T A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:14:3,11:0.78571:small_model:8,26,0
- chr1 134612386 . C T 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:14:2,12:0.85714:small_model:20,29,0
- chr1 134612399 . G T 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:14:2,12:0.85714:small_model:18,26,0
- chr1 134612454 . T A 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:14:2,12:0.85714:small_model:15,22,0
- chr1 134616659 . A T 29 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:7:0,7:1.00000:small_model:28,28,0
- chr1 134616698 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,28,0
- chr1 134616742 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,23,0
- chr1 134657472 . A C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr1 134697069 . T C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,15,0
- chr1 134708901 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,9,0
- chr1 134709484 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:1,11,0
- chr1 134709653 . A C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,3,0
- chr1 134776189 . A T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,20,0
- chr1 134783807 . C A 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,62,0
- chr1 135067526 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:2,6:0.66667:deepvariant:2,10,0
- chr1 135112299 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:11:4,7:0.63636:deepvariant:0,0,1
- chr1 135114055 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:7,7:0.50000:deepvariant:2,0,9
- chr1 135114865 . G T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:6,8:0.57143:deepvariant:2,0,3
- chr1 135273050 . C G 23.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,2:0.40000:deepvariant:20,33,0
- chr1 135278492 . G A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:18:6,12:0.66667:small_model:12,19,0
- chr1 135333527 . G C 26.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:11:0,11:1.00000:small_model:26,29,0
- chr1 135333582 . G C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:11:3,8:0.72727:small_model:9,18,0
- chr1 135333654 . C G 29.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:12:0,12:1.00000:small_model:29,26,0
- chr1 135416733 . T G 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:20,33,0
- chr1 135416752 . A T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:1,5:0.71429:deepvariant:5,15,0
- chr1 135416965 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:2,6:0.75000:deepvariant:5,10,0
- chr1 135417007 . T C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:13,24,0
- chr1 135458150 . C A 35.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:23:0,23:0.47826:deepvariant:34,36,9
- chr1 135458652 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:9,12:0.57143:deepvariant:3,0,10
- chr1 135458928 . A G 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:7,10:0.58824:deepvariant:6,0,12
- chr1 135460433 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:3,4:0.57143:deepvariant:3,0,7
- chr1 135671204 . C G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,18,0
- chr1 135762520 . A T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,19,0
- chr1 135762556 . A T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,22,0
- chr1 135762559 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,22,0
- chr1 135762560 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,22,0
- chr1 135762568 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,21,0
- chr1 135773855 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:0,22,0
- chr1 135774016 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,21,0
- chr1 135774040 . T A 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,21,0
- chr1 135774043 . A G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr1 135790513 . A C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:9:1,7:0.77778:small_model:10,17,0
- chr1 135819914 . C G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:8,10:0.55556:deepvariant:4,0,3
- chr1 135819975 . C A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:6,11:0.64706:deepvariant:4,0,3
- chr1 135820402 . C A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:12:2,10:0.83333:small_model:11,14,0
- chr1 135820429 . A T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:12:2,10:0.83333:deepvariant:4,14,0
- chr1 135820456 . G T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:12:2,10:0.83333:small_model:10,21,0
- chr1 135820858 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:4,2,0
- chr1 135877251 . A G 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,16,0
- chr1 135877955 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,17,0
- chr1 135883586 . A T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:3,17,0
- chr1 135883619 . T A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,24,0
- chr1 135883980 . G T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,17,0
- chr1 135884204 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr1 135884208 . C A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr1 135884505 . A T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,15,0
- chr1 135941127 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,14,0
- chr1 135941208 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:11,12,0
- chr1 135941366 . C G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,16,0
- chr1 135941425 . C A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr1 135944331 . T C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,18,0
- chr1 135944374 . T A 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,20,0
- chr1 135948215 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:22:7,15:0.68182:deepvariant:0,2,0
- chr1 136117839 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:11,8:0.42105:deepvariant:0,0,12
- chr1 136315694 . A C 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:20,17,0
- chr1 136315774 . C G 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,5:1.00000:small_model:17,23,0
- chr1 136315794 . C A 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:16,22,0
- chr1 136315831 . T A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:deepvariant:9,18,0
- chr1 136315848 . A G 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:16,19,0
- chr1 136315881 . C A 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:6,7,0
- chr1 136317914 . A G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,23,0
- chr1 136399046 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr1 136411962 . A T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr1 136412023 . A T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,12,0
- chr1 136412218 . G T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,15,0
- chr1 136604932 . T A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,32,0
- chr1 136604976 . A T 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,31,0
- chr1 136604988 . C A 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,30,0
- chr1 136605016 . C A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,38,0
- chr1 136633247 . T A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:4,6:0.60000:deepvariant:1,0,3
- chr1 136633370 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:5,8:0.61538:deepvariant:7,0,4
- chr1 136739867 . C G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:31:2,20:0.64516:deepvariant:11,11,0
- chr1 136740161 . C A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:33:17,16:0.48485:deepvariant:3,0,10
- chr1 136815459 . T A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,17,0
- chr1 136815516 . A T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,18,0
- chr1 136815524 . T C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,21,0
- chr1 136815569 . A T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:6,21,0
- chr1 136815575 . T C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,29,0
- chr1 136826572 . C A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:4,20,0
- chr1 136848654 . C G 27.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:10:0,5:0.50000:deepvariant:26,34,0
- chr1 136852820 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,4:0.66667:deepvariant:1,12,0
- chr1 136857353 . C T 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,21,0
- chr1 136858413 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:3,5:0.62500:deepvariant:0,0,5
- chr1 136859206 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:3,7:0.70000:deepvariant:0,10,0
- chr1 136926507 . T G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:15,12,0
- chr1 136926727 . C T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:13,9,0
- chr1 136939290 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:0,5,0
- chr1 136957185 . C T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,22,0
- chr1 137143596 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:1,0,5
- chr1 137181439 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,15,0
- chr1 137269473 . A G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:11,21,0
- chr1 137316635 . C A 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,14,0
- chr1 137317011 . G A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:9,28,0
- chr1 137317048 . C G 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:15,21,0
- chr1 137317114 . A T 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:16,22,0
- chr1 137317210 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,6:1.00000:deepvariant:0,21,0
- chr1 137317363 . A C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:0,6:0.85714:small_model:9,20,0
- chr1 137317869 . A T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:11:1,9:0.81818:deepvariant:5,17,0
- chr1 137459664 . A T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:5,3,0
- chr1 137459853 . T A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:2,4:0.66667:deepvariant:4,0,5
- chr1 137459997 . C A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:3,5,0
- chr1 137485911 . A T 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,19,0
- chr1 137599095 . A C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:1,3:0.75000:deepvariant:1,1,0
- chr1 137600126 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,6,0
- chr1 137616352 . T G 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:21,26,0
- chr1 137616363 . T C 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:20,29,0
- chr1 137667441 . T A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:3,0,0
- chr1 137667799 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,15,0
- chr1 137668698 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:2,3:0.60000:deepvariant:0,0,3
- chr1 137669698 . G T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,6,0
- chr1 137711670 . C A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,14,0
- chr1 137711772 . A G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,14,0
- chr1 137712002 . G A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,16,0
- chr1 137726371 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,16,0
- chr1 137829596 . A C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,16,0
- chr1 137829677 . A C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,16,0
- chr1 137865437 . T C 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:11:3,8:0.72727:small_model:15,29,0
- chr1 137969667 . T G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,26,0
- chr1 137969678 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,20,0
- chr1 137970204 . A T 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:17,18,0
- chr1 137983064 . C T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:5,12,0
- chr1 137984390 . C G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,17,0
- chr1 138068588 . A G 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:23,24,0
- chr1 138080810 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr1 138080814 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,20,0
- chr1 138080822 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr1 138081010 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,21,0
- chr1 138091419 . A T 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:19,26,0
- chr1 138091423 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr1 138091470 . G A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,26,0
- chr1 138179614 . T G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,27,0
- chr1 138179681 . G A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr1 138281961 . G C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,14,0
- chr1 138282052 . A G 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:19,17,0
- chr1 138509916 . A T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,20,0
- chr1 138509923 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,17,0
- chr1 138509930 . G T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,25,0
- chr1 138512233 . T G 21.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:21,28,0
- chr1 138512466 . C A 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:18,19,0
- chr1 138512809 . G A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,35,0
- chr1 138513574 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,18,0
- chr1 138515030 . C A 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:18,18,0
- chr1 138515140 . G A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,19,0
- chr1 138515359 . A T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,27,0
- chr1 138519985 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,13,0
- chr1 138735104 . T A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,3:0.75000:deepvariant:6,18,0
- chr1 138830521 . T G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,25,0
- chr1 138830527 . C T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,31,0
- chr1 138830528 . A C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,36,0
- chr1 138956672 . A T 26.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,2:0.50000:deepvariant:24,25,6
- chr1 139011651 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:0,13,0
- chr1 139015137 . C A 24.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:0,7:0.57143:deepvariant:23,29,0
- chr1 139050136 . G C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,21,0
- chr1 139060119 . C G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,17,0
- chr1 139205199 . C G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:small_model:9,19,0
- chr1 139213508 . G C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:5,1,0
- chr1 139214263 . G C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:2,2,0
- chr1 139215091 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,7,0
- chr1 139215456 . T A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:1,4:0.80000:deepvariant:3,0,4
- chr1 139215958 . C A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:1,4:0.80000:deepvariant:3,0,1
- chr1 139216265 . T A 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,31,0
- chr1 139216897 . G A 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:19,51,0
- chr1 139216905 . A C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:11,27,0
- chr1 139216917 . A C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:13,34,0
- chr1 139216941 . A T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,32,0
- chr1 139216958 . T C 38.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:37:4:0,4:1.00000:small_model:38,44,0
- chr1 139216974 . A C 26 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:4:0,4:1.00000:small_model:25,33,0
- chr1 139216996 . A T 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:17,20,0
- chr1 139217011 . A T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:15,18,0
- chr1 139217028 . G A 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:20,21,0
- chr1 139217098 . A T 24.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:4:0,4:1.00000:small_model:24,25,0
- chr1 139217106 . T A 27.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:4:0,4:1.00000:small_model:27,29,0
- chr1 139217686 . A G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:1,3:0.75000:small_model:12,16,0
- chr1 139229610 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr1 139304646 . T A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,26,0
- chr1 139304699 . T A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:14,24,0
- chr1 139304705 . C T 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,28,0
- chr1 139304756 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,24,0
- chr1 139306091 . A G 26.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:6:0,6:1.00000:small_model:26,29,0
- chr1 139445411 . T G 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:7:0,7:1.00000:small_model:20,25,0
- chr1 139445417 . C T 22.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:7:0,7:1.00000:small_model:22,32,0
- chr1 139445418 . A C 26.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:7:0,7:1.00000:small_model:26,34,0
- chr1 139445523 . T C 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:7:0,7:1.00000:small_model:24,25,0
- chr1 139755651 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:2,5:0.71429:deepvariant:0,3,0
- chr1 139755710 . C G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:15,24,0
- chr1 139758202 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:2,2:0.50000:deepvariant:1,13,0
- chr1 139854160 . C A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:2,4:0.66667:deepvariant:7,0,5
- chr1 139854286 . A G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:5,8,0
- chr1 139854296 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:6:1,5:0.83333:deepvariant:1,2,0
- chr1 139854305 . T G 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:22,23,0
- chr1 139973886 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:6:2,4:0.66667:deepvariant:2,0,1
- chr1 139995255 . A T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:3,5:0.62500:deepvariant:3,0,5
- chr1 140255209 . A T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:3,6:0.66667:deepvariant:3,11,0
- chr1 140293532 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr1 140293617 . A G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,23,0
- chr1 140303957 . A T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:15:3,12:0.80000:small_model:13,19,0
- chr1 140304698 . T A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:3,10:0.71429:deepvariant:3,6,0
- chr1 140306764 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr1 140367847 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr1 140367850 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,22,0
- chr1 140367887 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,19,0
- chr1 140785534 . A G 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,20,0
- chr1 140785773 . A T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr1 140785839 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr1 140785931 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,10,0
- chr1 140822010 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,3:0.60000:deepvariant:4,17,0
- chr1 140822896 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,15,0
- chr1 140872132 . A T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,18,0
- chr1 140872134 . A G 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:18,23,0
- chr1 140872253 . A T 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:7:0,6:0.85714:deepvariant:15,17,0
- chr1 140872424 . G A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:15,15,0
- chr1 140872453 . C G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:0,7:1.00000:small_model:17,14,0
- chr1 140872510 . T A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:8:0,8:1.00000:small_model:15,16,0
- chr1 140872527 . A G 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:8:0,8:1.00000:small_model:14,14,0
- chr1 140882956 . G C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:22:7,15:0.68182:deepvariant:8,0,0
- chr1 141022934 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,21,0
- chr1 141022945 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,22,0
- chr1 141141205 . T A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,22,0
- chr1 141141315 . C A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,17,0
- chr1 141184539 . C A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,26,0
- chr1 141366107 . A T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,3:0.75000:small_model:9,23,0
- chr1 141491192 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:4,6:0.60000:deepvariant:2,0,2
- chr1 141523798 . A T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,3:0.75000:deepvariant:12,18,0
- chr1 141534957 . A T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:16,27,0
- chr1 141534959 . A G 21.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:21,31,0
- chr1 141535233 . A T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,21,0
- chr1 141787227 . A C 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,32,0
- chr1 141787247 . A T 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,30,0
- chr1 141801600 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,3:0.75000:deepvariant:10,23,0
- chr1 141846933 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr1 141846953 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,22,0
- chr1 141846956 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,22,0
- chr1 141846980 . T C 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:18,34,0
- chr1 141847006 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,28,0
- chr1 151340089 . T C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:3,5:0.62500:small_model:13,0,14
- chr1 151340328 . G C 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:6:3,3:0.50000:deepvariant:7,0,15
- chr1 151341348 . A G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:5:2,3:0.60000:deepvariant:5,0,12
- chr1 151341465 . T C 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,5:1.00000:small_model:22,18,0
- chr1 151341568 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:3,2:0.40000:deepvariant:2,0,6
- chr1 151345324 . A C 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:17,9,0
- chr1 151345758 . T C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:12,5,0
- chr1 151346967 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,2:0.25000:deepvariant:0,0,11
- chr1 151347061 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,2:0.25000:deepvariant:1,0,13
- chr1 151350970 . A C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:8:5,3:0.37500:deepvariant:6,0,13
- chr1 155780019 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:11,6:0.35294:deepvariant:1,0,21
- chr1 162354250 . C G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:10:2:0,2:1.00000:small_model:0,25,13
- chr1 181663759 . T C 8.4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:8:25:20,5:0.20000:7,16,0
- chr1 181664109 . T C 7.2 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:26:21,5:0.19231:6,15,0
- chr1 185081774 . C T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:18:1,8:0.44444:deepvariant:13,0,33
- chr1 189406367 . G A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:24:7,16:0.33333:small_model:13,0,43
- chr1 201464138 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,8,0
- chr1 201464160 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,8,0
- chr1 201464168 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,10,0
- chr1 201464263 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,9,0
- chr1 201464760 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:3,8,0
- chr1 201464801 . A G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,13,0
- chr1 201464808 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,16,0
- chr1 201464810 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,15,0
- chr1 201465004 . T A 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:22,18,0
- chr1 203103241 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,14,0
- chr1 203103248 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr1 203103255 . T C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,17,0
- chr1 203103256 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,19,0
- chr1 203103260 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr1 203103266 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr1 203103280 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,20,0
- chr1 203103762 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,15,0
- chr1 203103786 . G A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,20,0
- chr1 203103787 . T C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,18,0
- chr1 203103794 . C G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:13,20,0
- chr1 203103799 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,18,0
- chr1 203103802 . A G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,19,0
- chr1 203103804 . G T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,13,0
- chr1 203103816 . T C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:13,16,0
- chr1 203103817 . T C 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:20,23,0
- chr1 203103818 . G C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:14,19,0
- chr1 203103826 . T C 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:14,19,0
- chr1 203103834 . A G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:13,21,0
- chr1 203103842 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,20,0
- chr1 203103854 . C T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:11,21,0
- chr1 203103865 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,19,0
- chr1 203103871 . G T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:11,20,0
- chr1 203103875 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,16,0
- chr1 203103887 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,12,0
- chr1 203103888 . C G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,19,0
- chr1 203103897 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,14,0
- chr1 203103898 . G A 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,22,0
- chr1 203103901 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,13,0
- chr1 205387525 . C T 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:14,13,0
- chr1 205387534 . A G 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:8,10,0
- chr1 205387556 . G A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,18,0
- chr1 205387557 . G C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,20,0
- chr1 205387576 . G C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,18,0
- chr1 205387585 . C T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,18,0
- chr1 205387588 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,17,0
- chr1 205387593 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,17,0
- chr1 205387595 . C A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,18,0
- chr1 205387598 . C A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,16,0
- chr1 205387609 . T C 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:18,23,0
- chr1 206092408 . C T 13.68 PASS H;FAU=0;FCU=11;FGU=0;FTU=3;RAU=0;RCU=4;RGU=0;RTU=2 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:20:0.25:0,5:0:12:0,0:0:15:0:5:0:12:0:0
- chr1 212980425 . A C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:15,4:0.21053:deepvariant:6,0,27
- chr1 214088772 . C T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:23:18,5:0.21739:deepvariant:8,0,22
- chr1 231184423 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:14,5:0.23810:deepvariant:2,0,14
- chr1 236118210 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:9,3:0.25000:deepvariant:3,0,20
- chr1 236118550 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:7,3:0.30000:deepvariant:2,0,15
- chr1 236118751 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:7,3:0.30000:deepvariant:5,0,18
- chr1 236119081 . T C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:9:4,4:0.44444:deepvariant:13,0,21
- chr1 236123977 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:11,2:0.15385:deepvariant:1,0,16
- chr1 244655636 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:13,3:0.18750:deepvariant:0,0,23
- chr1 245907454 . G A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:5:3,2:0.40000:small_model:16,0,33
- chr1 246209522 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:23:20,3:0.13044:2,21,0
- chr2 203079 . A G 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:38:8,30:0.78947:small_model:24,45,0
- chr2 205766 . A G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:41:11,30:0.73171:small_model:12,30,0
- chr2 214647 . A G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:3:1,2:0.66667:small_model:11,0,17
- chr2 214659 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:0,2:0.66667:deepvariant:2,0,0
- chr2 417704 . A G 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:11:8,3:0.27273:small_model:14,0,40
- chr2 417706 . A G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:11:8,3:0.27273:small_model:12,0,33
- chr2 418656 . A G 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:5,2:0.28571:small_model:19,0,47
- chr2 932082 . C G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:0,4:0.57143:small_model:5,6,0
- chr2 1224097 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,3:0.23077:deepvariant:1,0,18
- chr2 1224886 . C T 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:13:9,4:0.30769:small_model:24,0,48
- chr2 1586871 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:6,3:0.33333:deepvariant:4,0,21
- chr2 1595099 . T C 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:5:3,2:0.40000:small_model:20,0,37
- chr2 1595232 . T C 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:6:4,2:0.33333:small_model:15,0,37
- chr2 1595233 . G A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:6:4,2:0.33333:small_model:12,0,30
- chr2 1595241 . C G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:6:4,2:0.33333:small_model:13,0,28
- chr2 1687398 . G A 31.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:7:1,6:0.85714:small_model:31,0,27
- chr2 1687429 . T C 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:7:5,2:0.28571:small_model:13,0,33
- chr2 3071856 . G A 29.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:30:8:5,3:0.37500:small_model:29,0,49
- chr2 3336853 . G C 16.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:14:18:10,8:0.44444:16,16,0
- chr2 3337218 . A C 13 PASS . GT:GQ:DP:AD:VAF:PL 1/1:9:16:9,7:0.43750:12,9,0
- chr2 3337371 . G C 5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:15:8,7:0.46667:2,7,0
- chr2 3337403 . A C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:15:10,5:0.33333:small_model:12,0,37
- chr2 3337445 . G C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:8,3:0.25000:small_model:13,0,41
- chr2 3337555 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:12:8,4:0.33333:1,10,0
- chr2 3337587 . A C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:13:9,3:0.23077:deepvariant:11,0,29
- chr2 3337629 . G C 23.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:11:8,3:0.27273:small_model:23,0,44
- chr2 3748255 . C A 37.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:37,20,0
- chr2 3748299 . C A 29.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:4:0,4:1.00000:small_model:29,22,0
- chr2 3748310 . A G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:4:2,2:0.50000:small_model:14,0,26
- chr2 3748315 . A G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:4:2,2:0.50000:deepvariant:8,0,16
- chr2 3748319 . C T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:4:2,2:0.50000:deepvariant:8,0,16
- chr2 3748343 . C A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:1,4:0.80000:deepvariant:8,0,0
- chr2 3748387 . C A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:5:3,2:0.40000:small_model:14,0,31
- chr2 3748442 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:8,3:0.27273:deepvariant:11,0,16
- chr2 4482623 . G A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:20:13,7:0.35000:deepvariant:10,0,20
- chr2 5042453 . T C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:7:5,2:0.28571:small_model:13,0,32
- chr2 5043327 . T C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:9,3:0.23077:small_model:8,0,33
- chr2 5043434 . A T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:3,4:0.57143:small_model:13,0,19
- chr2 5044211 . A T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:12,3:0.20000:deepvariant:3,0,19
- chr2 5727811 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,14,0
- chr2 5727839 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,17,0
- chr2 5727847 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,16,0
- chr2 5727851 . A G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,2:0.66667:deepvariant:6,15,0
- chr2 5727855 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,19,0
- chr2 5727877 . T A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:11,22,0
- chr2 5727927 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,7,0
- chr2 5727939 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:10,19,0
- chr2 7510710 . G A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:10,4:0.28571:deepvariant:4,0,7
- chr2 7510749 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:3:6:1,4:0.66667:deepvariant:0,4,4
- chr2 24542159 . A T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:0,10:1.00000:deepvariant:3,5,0
- chr2 32159254 . G A 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:11,2:0.15385:small_model:8,0,30
- chr2 32159283 . A C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:13:11,2:0.15385:small_model:14,0,40
- chr2 33052643 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr2 33052651 . G A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr2 33052653 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr2 33052662 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr2 33052676 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr2 33052677 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr2 53937098 . T A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:4:1,3:0.75000:small_model:7,0,24
- chr2 55148162 . G A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:8,6:0.42857:deepvariant:3,0,14
- chr2 61679441 . A G 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:4:2,2:0.50000:small_model:3,0,35
- chr2 64384052 . C T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:12:6,5:0.41667:deepvariant:11,0,16
- chr2 66784808 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:15,5:0.25000:deepvariant:3,0,20
- chr2 68461497 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:12,5:0.29412:deepvariant:0,0,23
- chr2 74784701 . T C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr2 74784705 . C T 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr2 74784720 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr2 87438031 . T C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:6,4:0.36364:small_model:10,0,16
- chr2 87438038 . G A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:11:7,4:0.36364:small_model:13,0,19
- chr2 89733652 . C T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:8:6,2:0.25000:small_model:13,0,33
- chr2 89748940 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:6,6:0.50000:small_model:10,0,16
- chr2 89748975 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:14:9,5:0.35714:deepvariant:9,0,16
- chr2 89748993 . A C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:13:6,7:0.53846:deepvariant:10,0,14
- chr2 89749314 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:9,4:0.30769:deepvariant:1,0,15
- chr2 89749792 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:9:7,2:0.22222:small_model:8,0,33
- chr2 89751257 . A T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:8,3:0.27273:deepvariant:5,0,20
- chr2 89751730 . C G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:5,4:0.44444:small_model:10,0,21
- chr2 89939227 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:7,3:0.30000:deepvariant:2,0,16
- chr2 90234037 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:0,11,0
- chr2 90234065 . G A 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:18,18,0
- chr2 90234093 . G A 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:20,16,0
- chr2 90234121 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,4:0.80000:deepvariant:0,12,0
- chr2 90234149 . G A 21.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:20,17,0
- chr2 90854487 . G A 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:6,7,0
- chr2 90867374 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,13,0
- chr2 90867585 . A C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,18,0
- chr2 90867586 . T C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,24,0
- chr2 91006509 . C A 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,4:0.80000:small_model:14,24,0
- chr2 91052979 . A G 65.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:65:5:0,5:1.00000:small_model:66,91,0
- chr2 91062849 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:3,11,0
- chr2 91062850 . G A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:9,14,0
- chr2 91062902 . T C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:deepvariant:8,15,0
- chr2 91062939 . T C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,19,0
- chr2 91062946 . A T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:5,17,0
- chr2 91062964 . A G 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,16,0
- chr2 91062977 . G C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:1,2:0.66667:deepvariant:7,18,0
- chr2 91063012 . C G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:5,14,0
- chr2 91063763 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr2 91063876 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr2 91075418 . A C 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:18,12,0
- chr2 91075485 . C G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:13,14,0
- chr2 91075490 . A C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:10,13,0
- chr2 91075508 . A G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:13,14,0
- chr2 91075595 . A T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:3,8,0
- chr2 91075623 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:10,20,0
- chr2 91075624 . T C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:10,19,0
- chr2 91075636 . A C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,19,0
- chr2 91075677 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,21,0
- chr2 91075678 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,20,0
- chr2 91075684 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr2 91075689 . C G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,21,0
- chr2 91075692 . A T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,20,0
- chr2 91075705 . G A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,22,0
- chr2 91075713 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,21,0
- chr2 91075715 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,21,0
- chr2 91075719 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,22,0
- chr2 91075800 . G T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,16,0
- chr2 91075803 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,18,0
- chr2 91075807 . A C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,18,0
- chr2 91076278 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,3:0.60000:deepvariant:0,14,0
- chr2 91076284 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,13,0
- chr2 91086881 . G C 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:1,3:0.75000:small_model:18,98,0
- chr2 91087700 . A C 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:6:2,4:0.66667:small_model:99,99,0
- chr2 91090511 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,13,0
- chr2 91130127 . A G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:11:0,11:1.00000:small_model:9,27,0
- chr2 91130132 . T A 41.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:42:9:0,9:1.00000:small_model:41,65,0
- chr2 91130242 . G C 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:9:1,8:0.88889:small_model:99,99,0
- chr2 91130248 . A G 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:9:0,9:1.00000:small_model:20,22,0
- chr2 91130256 . T G 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:9:0,9:1.00000:small_model:24,47,0
- chr2 91130340 . G C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:10:1,9:0.90000:small_model:9,42,0
- chr2 91130740 . A G 21.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:9:0,8:0.88889:small_model:21,46,0
- chr2 91130748 . A C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:9:0,7:0.77778:small_model:9,50,0
- chr2 91130893 . A T 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:11:1,10:0.90909:small_model:18,47,0
- chr2 91284565 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:2,2:0.50000:deepvariant:5,9,0
- chr2 91284594 . C T 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:deepvariant:15,16,0
- chr2 91284610 . A T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:deepvariant:17,16,0
- chr2 91284627 . G A 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,18,0
- chr2 91284782 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,17,0
- chr2 91284785 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,19,0
- chr2 91284808 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:2,2:0.50000:deepvariant:2,15,0
- chr2 91284812 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,2:0.50000:deepvariant:3,14,0
- chr2 91306375 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:3,2:0.40000:deepvariant:4,17,0
- chr2 91306390 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:9,19,0
- chr2 91344864 . C T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:17,26,0
- chr2 91345980 . G C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:5,6:0.50000:deepvariant:1,2,0
- chr2 91346300 . C A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:6,8:0.57143:deepvariant:10,0,6
- chr2 91346366 . T A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:4,8:0.61538:deepvariant:7,0,3
- chr2 91346491 . G T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:13:4,9:0.69231:deepvariant:13,0,11
- chr2 91346584 . C G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:5,8:0.61538:deepvariant:9,0,6
- chr2 91347450 . T G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:5,6:0.54545:deepvariant:5,0,4
- chr2 91347489 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:6,6:0.50000:deepvariant:5,0,7
- chr2 91347509 . A G 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:8,4:0.33333:deepvariant:7,0,7
- chr2 91347611 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:1,0,12
- chr2 91386100 . T G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:15,26,0
- chr2 91386118 . C A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,2:0.50000:deepvariant:9,16,0
- chr2 91386148 . C T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,22,0
- chr2 91386154 . C G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,30,0
- chr2 91386162 . A G 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:2,2:0.50000:deepvariant:7,17,0
- chr2 91386176 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:1,2:0.50000:deepvariant:9,13,0
- chr2 91386240 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:11,6,0
- chr2 91386370 . T A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:2,2:0.50000:deepvariant:16,8,0
- chr2 91438379 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:4,15,0
- chr2 91438414 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,12,0
- chr2 91438489 . T C 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:5:0,5:1.00000:small_model:22,29,0
- chr2 91438499 . C T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:4,21,0
- chr2 91438502 . A C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,3:0.60000:deepvariant:8,35,0
- chr2 91438502 . A T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:4:5:0,2:0.40000:deepvariant:8,40,2
- chr2 91443672 . A C 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:19,7,0
- chr2 91443679 . A G 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:21,6,0
- chr2 91443758 . G T 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:14,8,0
- chr2 91443788 . C A 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:11,12,0
- chr2 91443803 . T C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,13,0
- chr2 91443878 . T C 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:14,6,0
- chr2 91443900 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:13,8,0
- chr2 91462376 . C A 47.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:13:1,9:0.69231:deepvariant:47,25,0
- chr2 91462376 . C T 47.5 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:12:13:1,3:0.23077:deepvariant:47,40,35
- chr2 91462448 . T A 25.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:13:1,11:0.84615:deepvariant:25,18,0
- chr2 91462465 . A G 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:15:2,12:0.80000:deepvariant:19,13,0
- chr2 91462506 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:6,8:0.53333:deepvariant:1,6,0
- chr2 91462510 . G A 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:15:0,15:1.00000:small_model:19,20,0
- chr2 91462542 . T A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:11,4:0.26667:deepvariant:1,0,12
- chr2 91462590 . A G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:14:6,7:0.50000:deepvariant:9,0,9
- chr2 91462595 . A T 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:15:7,8:0.53333:deepvariant:12,0,9
- chr2 91462656 . T C 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:15:8,7:0.46667:deepvariant:6,0,18
- chr2 91462722 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:2,5:0.71429:deepvariant:8,5,0
- chr2 91462854 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:7,8:0.53333:deepvariant:1,8,0
- chr2 91462987 . C G 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:13:0,13:1.00000:small_model:17,25,0
- chr2 91462996 . G C 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:13:0,11:0.84615:small_model:18,23,0
- chr2 91463001 . T C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:12:0,12:1.00000:small_model:17,30,0
- chr2 91463080 . C T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:11:2,8:0.72727:deepvariant:11,17,0
- chr2 91463121 . A G 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:15:1,13:0.86667:deepvariant:19,25,0
- chr2 91499010 . C T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,16,0
- chr2 91513291 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:2,2:0.50000:deepvariant:1,0,10
- chr2 92384724 . T C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:10:0,6:0.60000:deepvariant:12,20,0
- chr2 92395498 . G C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,23,0
- chr2 92396752 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,13,0
- chr2 92396860 . T G 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:21,18,0
- chr2 92396919 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,13,0
- chr2 92407208 . A T 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,18,0
- chr2 92525780 . T A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:21:9,12:0.57143:deepvariant:5,1,0
- chr2 92562885 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,16,0
- chr2 92586771 . A T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,18,0
- chr2 92586807 . G T 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr2 92586809 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,27,0
- chr2 92586821 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr2 92586884 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr2 92586918 . G C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,14,0
- chr2 92586925 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,15,0
- chr2 93022670 . T A 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:3:0,3:1.00000:small_model:22,26,0
- chr2 93027087 . A T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,21,0
- chr2 93027091 . T A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,20,0
- chr2 93027160 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,21,0
- chr2 93027185 . A T 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,23,0
- chr2 93027207 . A T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,23,0
- chr2 93166574 . G C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:1,6:0.85714:small_model:12,21,0
- chr2 93239116 . T A 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:16,14,0
- chr2 93239143 . G C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:15,13,0
- chr2 93265600 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,10,0
- chr2 93265895 . A T 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr2 93468407 . G A 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,14,0
- chr2 93468482 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,14,0
- chr2 93473085 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:1,13,0
- chr2 93474201 . G T 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,17,0
- chr2 93474229 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,20,0
- chr2 93474251 . T G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr2 93474317 . A T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:15,32,0
- chr2 93596863 . G A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:10,16,0
- chr2 93618959 . A C 26.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:9:0,8:0.88889:small_model:26,27,0
- chr2 93782103 . T A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,20,0
- chr2 93863050 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,16,0
- chr2 93965821 . T A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,23,0
- chr2 93965846 . G A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,26,0
- chr2 93966040 . G A 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:20,27,0
- chr2 93966053 . A T 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,27,0
- chr2 93966091 . T G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,22,0
- chr2 93966092 . C G 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:16,34,0
- chr2 93966093 . G A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,34,0
- chr2 93966101 . G A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,27,0
- chr2 93966128 . A T 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:18,22,0
- chr2 94046493 . A G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,14,0
- chr2 94046689 . T G 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,16,0
- chr2 94046735 . A C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,21,0
- chr2 94046809 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,19,0
- chr2 94046856 . C G 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,14,0
- chr2 94047538 . A G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,16,0
- chr2 94047558 . C G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,18,0
- chr2 94047633 . T C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,16,0
- chr2 94047735 . G C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,18,0
- chr2 94047917 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,15,0
- chr2 94047947 . A G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,15,0
- chr2 94047985 . T C 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,17,0
- chr2 94048039 . C A 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,17,0
- chr2 94048089 . G C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,15,0
- chr2 94048095 . C A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,19,0
- chr2 94188885 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,14,0
- chr2 94202070 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:4,5:0.45454:deepvariant:0,6,0
- chr2 94236889 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,11,0
- chr2 94238934 . T C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,17,0
- chr2 94271559 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,5,0
- chr2 94311808 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:3,17,0
- chr2 94312757 . G T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,17,0
- chr2 94379945 . A T 19 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:8:5:0,2:0.40000:deepvariant:18,34,7
- chr2 94474666 . C A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,2:0.66667:small_model:9,23,0
- chr2 94474732 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,13,0
- chr2 94488253 . C A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr2 94488323 . G T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:5,15,0
- chr2 94488368 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,17,0
- chr2 94488437 . C T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:3,4:0.57143:deepvariant:5,4,0
- chr2 94488943 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:4,4:0.50000:deepvariant:0,6,0
- chr2 94489246 . C A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:8:1,7:0.87500:deepvariant:12,6,0
- chr2 94489457 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:3,4:0.57143:deepvariant:1,0,0
- chr2 94532557 . A G 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:0,7:1.00000:small_model:18,22,0
- chr2 94532767 . C G 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:10:0,9:0.90000:small_model:24,24,0
- chr2 94566623 . G T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:11,11:0.50000:deepvariant:2,0,5
- chr2 94566684 . G A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:22:10,12:0.54545:deepvariant:7,3,0
- chr2 94566816 . G T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:22:12,10:0.45454:deepvariant:5,0,6
- chr2 94566853 . T G 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:11,10:0.47619:deepvariant:6,0,3
- chr2 94566993 . T G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:20:9,11:0.55000:deepvariant:5,1,0
- chr2 94567008 . C G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:20:9,11:0.55000:deepvariant:10,4,0
- chr2 94567044 . A C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:9,10:0.50000:deepvariant:4,0,4
- chr2 94567063 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:8,12:0.60000:deepvariant:4,0,8
- chr2 94567141 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:20:8,12:0.60000:deepvariant:1,1,0
- chr2 94567166 . A G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:20:8,12:0.60000:deepvariant:4,3,0
- chr2 94567216 . G A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:9,11:0.55000:deepvariant:9,0,4
- chr2 94567265 . T C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:20:13,7:0.35000:small_model:9,0,16
- chr2 94567326 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:13,8:0.38095:deepvariant:2,0,14
- chr2 94567351 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:14,7:0.33333:deepvariant:1,0,16
- chr2 94567466 . C A 21.6 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:3:20:5,7:0.35000:deepvariant:18,14,6
- chr2 94567569 . A C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:21:13,8:0.38095:deepvariant:0,0,0
- chr2 94567794 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:15,5:0.25000:deepvariant:0,0,10
- chr2 94631636 . T A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:21:13,7:0.33333:deepvariant:3,0,13
- chr2 94631671 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:14,7:0.33333:deepvariant:0,0,12
- chr2 94631705 . C A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:14,7:0.33333:deepvariant:3,0,10
- chr2 94631778 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:21:14,7:0.33333:deepvariant:8,0,27
- chr2 94631943 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:14,5:0.26316:deepvariant:2,0,26
- chr2 94860295 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:16:8,8:0.50000:deepvariant:9,0,8
- chr2 99358596 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:4:1,2:0.50000:small_model:9,0,16
- chr2 112207297 . C A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:16:12,4:0.25000:small_model:9,0,33
- chr2 118000626 . C G 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:20,11,0
- chr2 118000649 . T C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr2 118000656 . T G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:13,12,0
- chr2 118000670 . C A 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:14,13,0
- chr2 118043052 . A G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:2,3:0.60000:small_model:10,0,17
- chr2 130527429 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,12
- chr2 131719204 . T C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:3,2:0.40000:small_model:14,0,25
- chr2 132832636 . C T 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:9:6,3:0.33333:small_model:14,0,29
- chr2 134249790 . G T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:6:1,5:0.83333:small_model:0,23,7
- chr2 143269333 . T G 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:17,18,0
- chr2 146591720 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:1,0,27
- chr2 161048598 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,4:0.22222:deepvariant:0,0,21
- chr2 161048943 . T C 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:16:11,5:0.31250:deepvariant:8,0,30
- chr2 167283280 . C A 40 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/.:13:19:1,4:0.21053:deepvariant:39,25,33
- chr2 167283308 . C A 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:19:15,4:0.21053:deepvariant:6,0,20
- chr2 167283476 . C A 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:19:15,4:0.21053:small_model:20,0,45
- chr2 178429324 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:12:8,4:0.33333:deepvariant:5,0,23
- chr2 181511575 . T C 35.7 PASS . GT:GQ:DP:AD:VAF:MID:PL ./1:3:19:8,5:0.15789:deepvariant:32,17,46
- chr2 197757763 . G T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:13:2,11:0.84615:small_model:12,24,0
- chr2 198406381 . A G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:15:11,4:0.26667:small_model:15,0,34
- chr2 203278596 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:14:5,9:0.64286:small_model:11,0,16
- chr2 209116723 . C A 34.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:7:0,7:1.00000:small_model:34,19,0
- chr2 209116751 . C A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:6:3,3:0.50000:small_model:13,0,25
- chr2 209116947 . C A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:3:1,2:0.66667:small_model:13,0,20
- chr2 218293415 . G C 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:9:5,3:0.33333:small_model:15,0,33
- chr2 218293451 . C G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:4,3:0.42857:deepvariant:4,0,20
- chr2 218293528 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:1,0,14
- chr2 218293555 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,2:0.25000:deepvariant:0,0,18
- chr2 221851755 . A G 26.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:2,7:0.33333:deepvariant:23,0,26
- chr2 230579526 . C T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:1,8,0
- chr2 231489886 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:small_model:13,10,0
- chr2 232354866 . A C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:14:7,6:0.42857:deepvariant:8,0,13
- chr2 232354938 . C A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:12,4:0.25000:deepvariant:4,0,12
- chr2 233885384 . T C 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:6:2,4:0.66667:small_model:21,0,15
- chr2 233885444 . T A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:1,4:0.80000:deepvariant:1,1,0
- chr2 233885455 . C G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:2,3:0.60000:deepvariant:1,0,2
- chr2 233885468 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:1,3:0.60000:deepvariant:3,0,5
- chr2 236834780 . T C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:7,7,0
- chr2 236834810 . T C 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:16,11,0
- chr2 236834817 . T C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:13,11,0
- chr2 236834830 . G C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:5,14,0
- chr2 236834831 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:5,12,0
- chr2 236949909 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,3:0.60000:deepvariant:2,8,0
- chr2 239967548 . C T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:7,15,0
- chr2 242091213 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:14,5:0.26316:deepvariant:2,0,17
- chr2 242400052 . T G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:7:0,7:1.00000:small_model:15,18,0
- chr2 242400241 . T G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:1,8:0.88889:deepvariant:2,2,0
- chr2 242400284 . T G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:1,9:0.90000:deepvariant:5,5,0
- chr2 242401375 . C G 24.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:0,7:0.33333:deepvariant:22,19,9
- chr2 242401515 . C A 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,4:0.40000:deepvariant:5,10,8
- chr2 242557281 . C G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:14:11,3:0.21429:small_model:12,0,36
- chr2 242557319 . C G 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:14:11,3:0.21429:deepvariant:7,0,29
- chr2 242557327 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:11,3:0.21429:deepvariant:0,0,14
- chr3 953088 . T C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:small_model:10,16,0
- chr3 1169338 . T A 26 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:8:0,8:1.00000:small_model:25,19,0
- chr3 1169359 . T C 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:3,3:0.50000:deepvariant:15,9,0
- chr3 11777761 . C T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:23:9,13:0.56522:deepvariant:12,0,26
- chr3 11777762 . A C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:24:10,13:0.54167:deepvariant:8,0,27
- chr3 11777764 . C T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:23:9,14:0.60870:deepvariant:5,0,25
- chr3 11777765 . A T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:23:9,14:0.60870:deepvariant:15,0,29
- chr3 12653658 . T C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:13,10,0
- chr3 12654449 . A G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:12,12,0
- chr3 12654760 . A G 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:10,12,0
- chr3 12655524 . T C 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr3 12655603 . A C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:13,12,0
- chr3 13410201 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:11,6:0.35294:deepvariant:1,0,22
- chr3 21152762 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,14,0
- chr3 21152786 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,14,0
- chr3 21152789 . G A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:9,17,0
- chr3 36044782 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr3 36301648 . G A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:2,3:0.60000:deepvariant:3,10,0
- chr3 36301667 . T C 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:22,17,0
- chr3 36301728 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,5:0.71429:deepvariant:2,11,0
- chr3 50341642 . T C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:8,10,0
- chr3 50341656 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,10,0
- chr3 50341659 . C T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:6,11,0
- chr3 50341663 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:6,10,0
- chr3 50341669 . A T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:7,10,0
- chr3 54855504 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:11:0,3:0.27273:deepvariant:0,0,27
- chr3 66986676 . A T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:12:5:0,4:0.80000:small_model:0,37,26
- chr3 69174763 . C A 55.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:29:2:0,2:1.00000:small_model:54,29,0
- chr3 84963676 . C T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:9,3:0.25000:small_model:9,0,33
- chr3 84963961 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,20
- chr3 84963969 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,4:0.36364:deepvariant:0,0,20
- chr3 84963988 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,22
- chr3 84963992 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:7,4:0.36364:deepvariant:3,0,23
- chr3 84964016 . G A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:7,4:0.36364:small_model:11,0,28
- chr3 84964022 . A T 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:11:7,4:0.36364:small_model:18,0,36
- chr3 84964026 . G A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:11:7,4:0.36364:small_model:16,0,36
- chr3 84964052 . T A 30.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:31:11:7,4:0.36364:small_model:30,0,46
- chr3 84964073 . C T 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:11:7,4:0.36364:small_model:20,0,40
- chr3 84964095 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:11:7,4:0.36364:small_model:13,0,34
- chr3 84964112 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,3:0.27273:deepvariant:0,0,22
- chr3 84964115 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:7,4:0.36364:deepvariant:3,0,23
- chr3 84964134 . A T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,20
- chr3 84964139 . C A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:6,4:0.40000:deepvariant:3,0,21
- chr3 84964156 . G T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:9:5,4:0.44444:deepvariant:7,0,23
- chr3 84964159 . T G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:9:5,4:0.44444:deepvariant:8,0,22
- chr3 84964165 . A G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:5,4:0.44444:deepvariant:9,0,22
- chr3 84964167 . C A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:9:6,3:0.33333:deepvariant:6,0,20
- chr3 84964180 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:3,0,19
- chr3 84964182 . T G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:9:5,4:0.44444:small_model:13,0,30
- chr3 84964222 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,24
- chr3 84964223 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:2,0,24
- chr3 84964224 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,26
- chr3 84964227 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:3,0,24
- chr3 84964232 . G A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:4,0,24
- chr3 84964281 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,21
- chr3 84964282 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:5,4:0.44444:deepvariant:4,0,23
- chr3 84964284 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:5,4:0.44444:deepvariant:4,0,24
- chr3 84964288 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:3,0,23
- chr3 84964308 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:5,4:0.44444:deepvariant:5,0,22
- chr3 84964311 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:5,4:0.44444:small_model:10,0,18
- chr3 84964314 . A G 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:9:5,4:0.44444:small_model:18,0,28
- chr3 84964353 . T A 29.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:9:5,4:0.44444:small_model:29,0,45
- chr3 84964354 . G A 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:9:5,4:0.44444:small_model:21,0,35
- chr3 84964393 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:3,0,21
- chr3 84964397 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,21
- chr3 84964399 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:5,4:0.44444:deepvariant:0,0,19
- chr3 84964405 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:2,0,22
- chr3 84964413 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,23
- chr3 90427828 . C T 30 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:9:2,7:0.77778:small_model:30,0,26
- chr3 90480766 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:1,0,19
- chr3 90480814 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:2,0,24
- chr3 90480851 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:4,2:0.33333:deepvariant:2,0,15
- chr3 90874740 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr3 90877849 . G A 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:19,25,0
- chr3 90877962 . G T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,6:0.85714:small_model:10,16,0
- chr3 90888840 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:12,9:0.40909:deepvariant:0,0,8
- chr3 90894944 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:11,4:0.26667:deepvariant:2,0,16
- chr3 91178143 . G T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:3,5:0.62500:deepvariant:2,0,3
- chr3 91377898 . C A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:2,6:0.75000:deepvariant:6,4,0
- chr3 91377904 . A C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:3,5:0.62500:deepvariant:6,8,0
- chr3 91377951 . T A 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:2,6:0.75000:deepvariant:7,5,0
- chr3 91378021 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,6:0.75000:deepvariant:3,5,0
- chr3 91378022 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:4,5,0
- chr3 91378030 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:2,5,0
- chr3 91378719 . C G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:9,10,0
- chr3 91378755 . A T 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:8,11,0
- chr3 91378761 . G T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,10,0
- chr3 91378831 . T C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:11,7,0
- chr3 92594762 . C T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:6,10,0
- chr3 92772186 . G T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:7,9,0
- chr3 92784697 . A T 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:7:0,7:1.00000:small_model:21,30,0
- chr3 92784752 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:0,9,0
- chr3 92784785 . G T 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:8:0,7:0.87500:small_model:18,26,0
- chr3 92785455 . A C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,29,0
- chr3 92785482 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,29,0
- chr3 92785497 . C A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,28,0
- chr3 92785507 . C T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:9,20,0
- chr3 92832739 . A C 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:4:0,4:1.00000:small_model:22,27,0
- chr3 92985043 . A C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,25,0
- chr3 92987132 . A C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,13,0
- chr3 93969218 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,15,0
- chr3 93969284 . C T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:1,5:0.83333:small_model:14,18,0
- chr3 94059109 . G A 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:8:3,5:0.62500:deepvariant:7,11,0
- chr3 94059164 . C T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:3,5:0.62500:deepvariant:7,7,0
- chr3 94258195 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,21,0
- chr3 94258249 . G T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,18,0
- chr3 94267022 . C T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:2,6:0.75000:deepvariant:7,0,1
- chr3 94268677 . C T 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,7:0.87500:deepvariant:8,2,0
- chr3 94271285 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,11,0
- chr3 94328079 . T G 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:14,28,0
- chr3 94344981 . C G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:9:1,8:0.88889:deepvariant:4,19,0
- chr3 94366466 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:4,7,0
- chr3 94411446 . A C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,19,0
- chr3 94521379 . C G 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,27,0
- chr3 94584834 . G C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:9:1,8:0.88889:small_model:9,24,0
- chr3 94584837 . G A 25.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:9:1,8:0.88889:small_model:25,38,0
- chr3 94584880 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:1,8:0.88889:deepvariant:1,18,0
- chr3 94584976 . G C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:10:2,8:0.80000:deepvariant:10,16,0
- chr3 94740565 . T G 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,20,0
- chr3 94834598 . A G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,21,0
- chr3 94834619 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr3 94834643 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr3 94834653 . A C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:2,19,0
- chr3 94834682 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:10,22,0
- chr3 94834695 . G C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,22,0
- chr3 94839859 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:18:8,10:0.55556:deepvariant:0,7,0
- chr3 94841758 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:22:8,13:0.59091:deepvariant:1,5,0
- chr3 94841884 . C A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:21:4,17:0.80952:deepvariant:8,7,0
- chr3 94949919 . T A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,23,0
- chr3 94955298 . A T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:8,24,0
- chr3 94956805 . G A 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:16,24,0
- chr3 94956806 . A T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,17,0
- chr3 94964566 . C T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,6:1.00000:small_model:15,30,0
- chr3 94964570 . C T 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,5:0.83333:small_model:16,24,0
- chr3 94964714 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:0,21,0
- chr3 94964745 . A T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:15,22,0
- chr3 94965911 . A C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:deepvariant:10,18,0
- chr3 94966309 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,18,0
- chr3 94983751 . C A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,18,0
- chr3 94983769 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,17,0
- chr3 94983773 . C A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,17,0
- chr3 94983806 . A T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,14,0
- chr3 95006675 . T A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,19,0
- chr3 95015531 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,10,0
- chr3 95034474 . T A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,19,0
- chr3 95059964 . G A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,28,0
- chr3 95060069 . T C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,22,0
- chr3 95136020 . A G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:26:10,15:0.57692:deepvariant:5,0,7
- chr3 95136137 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:27:10,17:0.62963:deepvariant:5,0,5
- chr3 95136615 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:27:12,15:0.55556:deepvariant:1,0,2
- chr3 95136689 . T A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:27:11,16:0.59259:deepvariant:3,0,3
- chr3 95137077 . A T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:10,14:0.58333:deepvariant:1,0,3
- chr3 95137091 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:10,12:0.52174:deepvariant:0,0,7
- chr3 95137346 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:11,11:0.50000:deepvariant:3,0,3
- chr3 95149895 . T A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:14:6,8:0.57143:deepvariant:0,1,0
- chr3 95201238 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:9,5:0.35714:deepvariant:4,0,17
- chr3 95201654 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:9,5:0.35714:deepvariant:0,0,15
- chr3 95202087 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:7,8:0.53333:deepvariant:3,0,6
- chr3 95202090 . C G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:7,8:0.53333:deepvariant:3,0,8
- chr3 95280752 . T G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:17,9:0.34615:deepvariant:1,0,9
- chr3 95325000 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:2,0,15
- chr3 95325009 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:9,5:0.35714:deepvariant:0,0,14
- chr3 95326017 . T G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:8,15:0.60000:deepvariant:0,0,6
- chr3 95326100 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:27:9,18:0.66667:deepvariant:3,6,0
- chr3 95326110 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:27:9,18:0.66667:deepvariant:4,10,0
- chr3 95326255 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:27:7,20:0.74074:small_model:9,17,0
- chr3 95326318 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:28:7,21:0.75000:deepvariant:0,9,0
- chr3 95326340 . G C 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:28:7,21:0.75000:deepvariant:7,16,0
- chr3 95326343 . T A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:28:7,21:0.75000:deepvariant:5,13,0
- chr3 95326344 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:28:8,20:0.71429:deepvariant:2,13,0
- chr3 95326375 . T A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:27:6,21:0.77778:deepvariant:5,11,0
- chr3 95326520 . G A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:30:7,23:0.76667:deepvariant:10,14,0
- chr3 95326580 . C T 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:31:7,24:0.77419:small_model:12,13,0
- chr3 95326596 . C G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:32:6,24:0.75000:deepvariant:3,13,0
- chr3 95326618 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:32:8,24:0.75000:deepvariant:8,16,0
- chr3 95326626 . A T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:32:8,24:0.75000:deepvariant:5,15,0
- chr3 95326902 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:7,10:0.58824:deepvariant:1,0,11
- chr3 95397464 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:23:16,7:0.30435:small_model:10,0,98
- chr3 96107455 . C T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:11,12:0.52174:deepvariant:5,0,13
- chr3 96107684 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:14,8:0.36364:deepvariant:2,0,15
- chr3 96156646 . A C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:10,5:0.33333:deepvariant:2,0,13
- chr3 96156764 . T G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:10,5:0.33333:deepvariant:5,0,15
- chr3 96157878 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:2,0,13
- chr3 97631069 . C A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:13:10,3:0.23077:small_model:17,0,41
- chr3 101395594 . A T 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:19:12,7:0.36842:small_model:13,0,28
- chr3 104758319 . A T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:11,3:0.21429:small_model:9,0,34
- chr3 109353034 . G A 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:20:7,10:0.50000:small_model:15,0,20
- chr3 109353394 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:19:16,3:0.15789:deepvariant:9,0,34
- chr3 125654067 . T C 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:8:6,2:0.25000:small_model:12,0,35
- chr3 127162477 . G A 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:3:1,2:0.66667:small_model:24,0,27
- chr3 132287868 . C T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:9:5:3,2:0.40000:small_model:0,10,38
- chr3 135386167 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:16,5:0.23810:deepvariant:1,0,13
- chr3 143439865 . C G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:20:8,5:0.25000:deepvariant:12,0,3
- chr3 148770827 . C T 28.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:28:16:11,5:0.31250:small_model:28,0,99
- chr3 155464160 . T C 26.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:24:24:12,12:0.50000:26,26,0
- chr3 161003970 . G A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:12:10,2:0.16667:small_model:10,0,38
- chr3 167371772 . T A 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:17,16,0
- chr3 168362607 . T A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:9,5:0.35714:deepvariant:4,0,27
- chr3 172261065 . A G 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:26:21,5:0.19231:small_model:18,0,45
- chr3 178493204 . G A 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:7:0,7:1.00000:small_model:25,31,0
- chr3 178493232 . G A 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:0,7:1.00000:small_model:19,20,0
- chr3 178493260 . G A 23.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:7:0,7:1.00000:small_model:23,18,0
- chr3 182636168 . C A 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:3:1,2:0.66667:small_model:20,0,17
- chr3 186280500 . C T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:6,14,0
- chr3 186280501 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,16,0
- chr3 186280502 . G A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,16,0
- chr3 186280505 . T C 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:7,18,0
- chr3 186280519 . G A 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:19,27,0
- chr3 186280541 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr3 186280549 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr3 186280576 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,14,0
- chr3 186280594 . A T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,15,0
- chr3 186280599 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,16,0
- chr3 186280605 . C A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,17,0
- chr3 186280636 . C T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,16,0
- chr3 186280637 . A G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,17,0
- chr3 186280648 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,12,0
- chr3 186280663 . G C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,14,0
- chr3 186679871 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:10,13,0
- chr3 186679872 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,16,0
- chr3 186679880 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:5,18,0
- chr3 186679889 . C T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:4,17,0
- chr3 186679901 . C T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:4,14,0
- chr3 186679902 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,17,0
- chr3 186679904 . A T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,4:0.80000:deepvariant:6,17,0
- chr3 186679908 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:8,21,0
- chr3 186679914 . G A 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:9,21,0
- chr3 186679930 . T C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:11,23,0
- chr3 186679931 . G A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:10,19,0
- chr3 186679934 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:deepvariant:11,22,0
- chr3 186679938 . A G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:9,23,0
- chr3 186679944 . T C 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:deepvariant:13,19,0
- chr3 186679957 . T C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:9,20,0
- chr3 186679968 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:0,16,0
- chr3 191000322 . T C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:10:2:0,2:1.00000:small_model:0,23,9
- chr3 191969533 . G A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:17,10,0
- chr3 197119644 . T A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:22:15,7:0.31818:small_model:11,0,29
- chr3 198570637 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,18,0
- chr3 198570638 . G A 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,2:0.66667:small_model:15,20,0
- chr3 198570639 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,16,0
- chr3 198570641 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,2:0.50000:deepvariant:1,16,0
- chr3 198570651 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,20,0
- chr3 198570678 . C A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:1,3:0.75000:deepvariant:8,21,0
- chr3 198572370 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,15,0
- chr3 198580497 . A C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:11,13,0
- chr3 198581229 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,8,0
- chr3 198581911 . G T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,12,0
- chr3 198581931 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,17,0
- chr3 198581935 . T C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,22,0
- chr3 198581944 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,16,0
- chr3 198584217 . A C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:10:5,5:0.50000:small_model:16,0,22
- chr3 198594466 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,4:0.40000:deepvariant:0,0,19
- chr3 198652114 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:7,3:0.30000:small_model:12,0,51
- chr3 198652230 . A T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:8:6,2:0.25000:small_model:9,0,17
- chr3 199531891 . A T 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:54:2,32:0.59259:small_model:15,46,0
- chr3 200105855 . A C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:8,2:0.20000:small_model:12,0,46
- chr3 200108897 . T C 12.422 PASS FAU=0;FCU=3;FGU=0;FTU=9;RAU=0;RCU=4;RGU=0;RTU=9 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:12:25:0.28:0,7:0:12:0,0:0:7:0:18:0:0:0:12
- chr3 200187007 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:6,3,0
- chr3 200187012 . G A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:2,4:0.66667:deepvariant:9,5,0
- chr3 200187024 . G A 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:1,5:0.83333:deepvariant:19,16,0
- chr3 200187038 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:1,5:0.83333:deepvariant:7,10,0
- chr3 200187530 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:4,3:0.42857:deepvariant:4,3,0
- chr3 200187591 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,12,0
- chr3 200187652 . G A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:2,3:0.60000:deepvariant:10,11,0
- chr3 200187973 . T G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,12,0
- chr3 200188005 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:2,6,0
- chr3 200188019 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,6,0
- chr3 200188065 . T G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:11,15,0
- chr3 200188143 . T G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,13,0
- chr3 200188512 . A G 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:1,5:0.83333:deepvariant:16,19,0
- chr3 200188632 . T G 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:16,19,0
- chr3 200188662 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,9,0
- chr3 200188879 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:8,4:0.30769:deepvariant:2,0,7
- chr3 200191068 . T G 21.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:3:1,2:0.66667:small_model:21,0,22
- chr3 200192297 . G A 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:1,4:0.80000:small_model:17,0,10
- chr3 200747129 . A G 26.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:26,16,0
- chr3 200747253 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,8,0
- chr3 200899992 . G A 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:14,10,0
- chr3 201098497 . C A 8.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:18:13,5:0.27778:7,11,0
- chr4 756756 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:12:9,3:0.25000:deepvariant:6,0,26
- chr4 756764 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:10,2:0.16667:deepvariant:2,0,22
- chr4 757453 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,12,0
- chr4 925170 . G A 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:16:13,3:0.18750:deepvariant:17,0,41
- chr4 1426693 . G A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,21,0
- chr4 1426698 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr4 1426701 . C A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr4 1426710 . G A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,20,0
- chr4 1426778 . G A 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:deepvariant:13,18,0
- chr4 1427023 . C T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:15,14,0
- chr4 1427028 . G A 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,17,0
- chr4 1427078 . G A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:11,13,0
- chr4 1427128 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,17,0
- chr4 1427134 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:8,17,0
- chr4 1427151 . C A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:9,16,0
- chr4 1427160 . A G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:13,22,0
- chr4 1427178 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:9,18,0
- chr4 1427184 . A G 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,14,0
- chr4 1427228 . G A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:1,2:0.66667:deepvariant:12,14,0
- chr4 1427234 . A G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:1,2:0.66667:deepvariant:12,18,0
- chr4 1427278 . G A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:1,3:0.75000:small_model:15,12,0
- chr4 1427328 . G A 27.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,5:0.83333:small_model:27,13,0
- chr4 1427957 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:13:5,8:0.61538:deepvariant:3,8,0
- chr4 1427983 . G C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:6,8:0.57143:deepvariant:5,3,0
- chr4 1518979 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,13
- chr4 1519013 . G T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:4,3:0.42857:deepvariant:4,0,10
- chr4 1519016 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:2,0,11
- chr4 3292808 . T G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:5:2,3:0.60000:small_model:8,0,23
- chr4 3292827 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:3,2:0.40000:small_model:9,0,24
- chr4 3814015 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:17,4:0.19048:deepvariant:0,0,26
- chr4 3814167 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:23:17,6:0.26087:4,12,0
- chr4 3814184 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:23:17,6:0.26087:small_model:9,0,37
- chr4 3814187 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:22:16,6:0.27273:0,11,0
- chr4 7189501 . T C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:12:4:0,4:1.00000:small_model:0,22,9
- chr4 7454538 . A G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:10,10,0
- chr4 7836327 . C A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:16:9,6:0.37500:small_model:9,0,21
- chr4 7836329 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:11,5:0.31250:deepvariant:0,0,14
- chr4 7836401 . C A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:11,5:0.31250:deepvariant:0,0,11
- chr4 7836663 . C A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:6,5:0.45454:deepvariant:1,0,14
- chr4 7836752 . C T 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:9:4,5:0.55556:small_model:19,0,24
- chr4 7836759 . C A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:9:4,4:0.44444:small_model:10,0,19
- chr4 7836776 . C T 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:9:4,5:0.55556:small_model:15,0,19
- chr4 7836800 . C T 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:11:6,5:0.45454:small_model:20,0,27
- chr4 7836824 . C T 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:10:6,4:0.40000:small_model:17,0,31
- chr4 7836848 . C T 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:8:6,2:0.25000:small_model:12,0,31
- chr4 7839616 . C G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:5,2:0.25000:deepvariant:10,0,26
- chr4 7839640 . C G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:8:5,3:0.37500:deepvariant:8,0,23
- chr4 7840369 . A T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:7,3:0.27273:deepvariant:11,0,27
- chr4 7840371 . C A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:11:7,4:0.36364:deepvariant:16,0,30
- chr4 7840485 . C T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:3,4:0.57143:deepvariant:6,0,4
- chr4 7840489 . A C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:3,4:0.57143:deepvariant:4,0,1
- chr4 7840491 . C A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:1,4:0.57143:deepvariant:7,0,1
- chr4 7840495 . A C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:11,0,0
- chr4 7840519 . A C 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:22,21,0
- chr4 7840561 . C A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:11,15,0
- chr4 7840563 . A C 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:deepvariant:23,20,0
- chr4 7840585 . C A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:16,10,0
- chr4 7840587 . A C 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:1,5:0.83333:deepvariant:20,14,0
- chr4 7840609 . C A 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:1,5:0.83333:deepvariant:12,13,0
- chr4 7840611 . A C 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:1,5:0.83333:deepvariant:20,14,0
- chr4 7841209 . A C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:17:12,5:0.29412:small_model:16,0,41
- chr4 7841211 . C A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:17:12,5:0.29412:small_model:12,0,28
- chr4 7841427 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:11,5:0.31250:deepvariant:2,0,11
- chr4 7841449 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:11,5:0.31250:deepvariant:4,0,16
- chr4 7841451 . A C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:16:11,5:0.31250:deepvariant:9,0,20
- chr4 7841715 . A C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:22:16,5:0.22727:deepvariant:5,0,21
- chr4 7842075 . C A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:15,6:0.27273:deepvariant:0,0,17
- chr4 8532170 . T C 27.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:26,11,0
- chr4 8618966 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:8:6,2:0.25000:deepvariant:5,0,16
- chr4 17592036 . C A 30.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:25:8,17:0.16000:deepvariant:30,15,65
- chr4 21501676 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:3,12,0
- chr4 21501678 . G A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,16,0
- chr4 21501704 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,13,0
- chr4 21501721 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,14,0
- chr4 21501725 . T C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,16,0
- chr4 21501732 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,14,0
- chr4 24755350 . C T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:9:6,3:0.33333:small_model:14,0,33
- chr4 24755370 . T C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:9:6,3:0.33333:small_model:16,0,37
- chr4 24755382 . C T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:7,2:0.22222:deepvariant:5,0,23
- chr4 24755418 . C T 27.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:28:9:6,3:0.33333:small_model:27,0,49
- chr4 24755422 . C T 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:9:6,3:0.33333:small_model:21,0,38
- chr4 24755454 . C T 29.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:11:7,4:0.36364:small_model:29,0,99
- chr4 26193716 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,7,0
- chr4 49346527 . A C 11.567 PASS H;FAU=5;FCU=9;FGU=0;FTU=0;RAU=7;RCU=6;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:27:0.5556:0,15:0.0909:11:0,1:12:15:0:0:10:1:0:0
- chr4 49657031 . C A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:4,22,0
- chr4 49657040 . T A 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,22,0
- chr4 49657085 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,18,0
- chr4 49657131 . A T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:15,12,0
- chr4 49657147 . G A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:13,18,0
- chr4 49657184 . T A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:15,26,0
- chr4 49657247 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:2,21,0
- chr4 49657347 . A G 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:19,18,0
- chr4 49657631 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:2,21,0
- chr4 49657728 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,15,0
- chr4 49705574 . G T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,6:0.75000:deepvariant:2,12,0
- chr4 49705594 . C G 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:8:0,7:0.87500:small_model:19,16,0
- chr4 49705607 . G A 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:8:0,7:0.87500:small_model:19,17,0
- chr4 49705621 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:1,6:0.75000:deepvariant:4,19,0
- chr4 49705623 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:0,6:0.75000:deepvariant:2,20,0
- chr4 49705633 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,7:0.87500:deepvariant:1,20,0
- chr4 49705635 . C G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:0,7:0.87500:deepvariant:3,21,0
- chr4 49705639 . T G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:0,8:1.00000:deepvariant:4,22,0
- chr4 49705646 . C T 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:8:0,8:1.00000:small_model:20,24,0
- chr4 49705653 . T G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:2,6:0.75000:deepvariant:1,20,0
- chr4 49705660 . T C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:1,7:0.87500:deepvariant:4,21,0
- chr4 49705672 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:8:0,8:1.00000:small_model:11,20,0
- chr4 49705682 . G T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:7:0,7:1.00000:small_model:14,25,0
- chr4 49705694 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:0,7:0.87500:deepvariant:4,20,0
- chr4 49705738 . A C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:0,6:0.85714:deepvariant:3,19,0
- chr4 49705739 . T G 22.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:7:0,7:1.00000:small_model:22,22,0
- chr4 49705752 . T G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:1,7:0.87500:small_model:9,20,0
- chr4 49705771 . T A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,7:0.87500:deepvariant:2,22,0
- chr4 49705788 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,7:1.00000:deepvariant:0,21,0
- chr4 49705804 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:0,7:1.00000:deepvariant:1,21,0
- chr4 49705805 . G A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:0,7:1.00000:small_model:9,25,0
- chr4 49705832 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:0,6:0.75000:deepvariant:2,20,0
- chr4 49705844 . T A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:0,7:0.87500:deepvariant:5,22,0
- chr4 49705846 . C T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:0,7:0.87500:small_model:10,18,0
- chr4 49705858 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,6:0.85714:deepvariant:0,19,0
- chr4 49705864 . T A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:2,6:0.75000:deepvariant:2,19,0
- chr4 49705873 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,7:1.00000:deepvariant:0,19,0
- chr4 49705883 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,7:1.00000:deepvariant:0,19,0
- chr4 49705884 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:0,7:1.00000:deepvariant:3,20,0
- chr4 49705910 . T A 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:8:1,7:0.87500:small_model:19,16,0
- chr4 49705922 . G C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:0,6:0.75000:deepvariant:3,18,0
- chr4 49705936 . G C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:0,7:0.87500:small_model:12,13,0
- chr4 49705958 . A C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:8:1,7:0.87500:small_model:11,21,0
- chr4 49705963 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,7:0.87500:deepvariant:1,18,0
- chr4 49705965 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:0,7:0.87500:deepvariant:3,17,0
- chr4 49705968 . A T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,7:1.00000:small_model:10,24,0
- chr4 49705971 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,7:1.00000:deepvariant:0,15,0
- chr4 49705986 . A T 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:1,6:0.85714:small_model:14,16,0
- chr4 49706018 . T C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,6:0.85714:deepvariant:12,17,0
- chr4 49706020 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,6:0.85714:deepvariant:10,16,0
- chr4 49706024 . T C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,6:0.85714:deepvariant:10,14,0
- chr4 49706286 . G C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,19,0
- chr4 49706294 . A C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:4,17,0
- chr4 49706302 . G T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:11,29,0
- chr4 49706413 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,20,0
- chr4 49706422 . G A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:small_model:11,19,0
- chr4 49706428 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,20,0
- chr4 49706502 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,20,0
- chr4 49706505 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,20,0
- chr4 50451703 . C A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:4,20,0
- chr4 50484439 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,16,0
- chr4 50487057 . C T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,20,0
- chr4 50487091 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:2,18,0
- chr4 50487940 . A T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,4:0.80000:deepvariant:3,18,0
- chr4 50725896 . T C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,20,0
- chr4 50773315 . T A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr4 50773322 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr4 50803294 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr4 50803307 . T A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr4 50803318 . G T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr4 50803380 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,18,0
- chr4 50810540 . G A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,32,0
- chr4 50819370 . A T 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:16,32,0
- chr4 50870055 . G T 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:21:6,13:0.61905:deepvariant:7,14,0
- chr4 50871268 . A G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:16:5,11:0.68750:deepvariant:13,16,0
- chr4 50912087 . G C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr4 50912115 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr4 50991070 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,16,0
- chr4 51066433 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,17,0
- chr4 51067471 . C G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,3:0.50000:small_model:1,15,0
- chr4 51067489 . A T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:14,26,0
- chr4 51067493 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:1,19,0
- chr4 51067494 . A G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:13,33,0
- chr4 51069613 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,3:0.50000:deepvariant:1,15,0
- chr4 51069894 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:3,3:0.50000:deepvariant:0,14,0
- chr4 51137186 . T A 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:8:0,8:1.00000:small_model:19,39,0
- chr4 51219442 . T G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr4 51220068 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr4 51221451 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,16,0
- chr4 51221873 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr4 51222296 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr4 51222313 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,18,0
- chr4 51222575 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,19,0
- chr4 51222648 . G T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,12,0
- chr4 51242243 . G A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,32,0
- chr4 51284849 . A T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:8,28,0
- chr4 51284850 . A T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:9,35,0
- chr4 51296678 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:0,6:0.85714:small_model:11,23,0
- chr4 51298604 . A C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,22,0
- chr4 51328797 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,22,0
- chr4 51465515 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,20,0
- chr4 51499009 . T A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr4 51511855 . A C 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,4:0.80000:small_model:14,22,0
- chr4 51511904 . A G 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,4:0.80000:small_model:17,23,0
- chr4 51547113 . T A 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,26,0
- chr4 51547114 . A T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:18,32,0
- chr4 51568217 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,29,0
- chr4 51617182 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:0,19,0
- chr4 51617526 . T A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,18,0
- chr4 51617609 . C G 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:15,27,0
- chr4 51617614 . G T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:small_model:9,19,0
- chr4 51617706 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,4:0.80000:small_model:12,16,0
- chr4 51617916 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:1,21,0
- chr4 51618796 . C T 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,20,0
- chr4 51623082 . G C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:10:0,10:1.00000:small_model:8,25,0
- chr4 51662253 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr4 51662291 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,15,0
- chr4 51665067 . G A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,29,0
- chr4 51666617 . A T 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,36,0
- chr4 51666767 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,18,0
- chr4 51666773 . G A 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,24,0
- chr4 51666783 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,19,0
- chr4 51666814 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,26,0
- chr4 51703919 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,20,0
- chr4 51703946 . T G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:5,21,0
- chr4 51704190 . A G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:12,34,0
- chr4 51728437 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,3:0.75000:deepvariant:2,21,0
- chr4 51739499 . C T 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:15,36,0
- chr4 51740621 . A T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,23,0
- chr4 51742419 . A T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:13,38,0
- chr4 51744234 . C A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,3:0.75000:small_model:11,23,0
- chr4 51745984 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:3,23,0
- chr4 51780311 . C A 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,5:0.83333:small_model:16,28,0
- chr4 51841210 . A G 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,29,0
- chr4 51841801 . C G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:small_model:10,19,0
- chr4 51860881 . A T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,28,0
- chr4 51861032 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:2,19,0
- chr4 51871952 . A T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,18,0
- chr4 51871976 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,17,0
- chr4 51872026 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr4 51872118 . A C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,23,0
- chr4 51873028 . T G 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:19,26,0
- chr4 51893111 . C T 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:14,28,0
- chr4 51914475 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.85714:deepvariant:0,18,0
- chr4 51915541 . C T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,30,0
- chr4 51915740 . C G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,17,0
- chr4 51943140 . T C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,32,0
- chr4 51943151 . T G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,23,0
- chr4 51943174 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr4 51972811 . T C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,3:0.75000:small_model:10,33,0
- chr4 51978572 . T A 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,16,0
- chr4 51985776 . T A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,20,0
- chr4 51988765 . T C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,25,0
- chr4 51988799 . T C 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:15,19,0
- chr4 51989628 . C G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:2,18,0
- chr4 52006707 . G C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,24,0
- chr4 52015770 . C G 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:7,23,0
- chr4 52015794 . A T 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:21,30,0
- chr4 52062680 . G C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,5:0.71429:deepvariant:10,20,0
- chr4 54959996 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:9:2,6:0.66667:deepvariant:8,17,0
- chr4 55195635 . G T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:9,15,0
- chr4 55195797 . G T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:2,2:0.50000:deepvariant:4,17,0
- chr4 55195842 . G C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:2,2:0.50000:deepvariant:3,14,0
- chr4 55195878 . C G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:2,2:0.50000:deepvariant:4,14,0
- chr4 60367488 . G C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:13,13,0
- chr4 60367499 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,16,0
- chr4 60367506 . C T 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,19,0
- chr4 60367509 . G C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,18,0
- chr4 60367516 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,19,0
- chr4 60367522 . A T 38.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:29:3:0,3:1.00000:small_model:38,29,0
- chr4 60367524 . T C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr4 60367532 . C A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr4 60367537 . G A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr4 60367541 . G A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr4 60367545 . T A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,20,0
- chr4 60367547 . C A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,20,0
- chr4 60367555 . G T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:12,15,0
- chr4 60367579 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,22,0
- chr4 60367584 . T C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,44,0
- chr4 60367587 . G A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,18,0
- chr4 60367628 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,16,0
- chr4 60367630 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,17,0
- chr4 60367636 . T C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,18,0
- chr4 60367653 . C A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:13,13,0
- chr4 60367662 . T C 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:12,21,0
- chr4 60367672 . C T 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,19,0
- chr4 60367673 . A G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,19,0
- chr4 60367686 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,20,0
- chr4 60367687 . T A 31.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:31,19,0
- chr4 60367688 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,22,0
- chr4 60367698 . A G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,21,0
- chr4 60367702 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,21,0
- chr4 60367716 . G C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,22,0
- chr4 60367726 . T C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,23,0
- chr4 60367727 . G A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,21,0
- chr4 60367734 . T C 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:20,17,0
- chr4 60367735 . G A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,21,0
- chr4 60367743 . G T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,20,0
- chr4 60367775 . T A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,3:0.60000:deepvariant:6,20,0
- chr4 68271535 . G A 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:23,17,0
- chr4 68271555 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:0,3:0.75000:deepvariant:0,5,0
- chr4 68271791 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,26,0
- chr4 85567580 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:10,3:0.23077:deepvariant:0,0,22
- chr4 110609246 . C T 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:1,6:0.85714:small_model:23,0,17
- chr4 135045945 . T C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:8,8,0
- chr4 135045985 . T A 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:17,8,0
- chr4 135046045 . G C 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:15,10,0
- chr4 135046049 . C A 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:15,11,0
- chr4 135046050 . A G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:13,8,0
- chr4 135046062 . T C 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:14,8,0
- chr4 135046151 . T C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:14,5,0
- chr4 135046197 . T C 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:15,10,0
- chr4 135046209 . G C 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:11,8,0
- chr4 135046221 . A G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:14,10,0
- chr4 135046411 . A G 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:1,2:0.66667:deepvariant:13,12,0
- chr4 135046451 . T A 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:21,10,0
- chr4 135046452 . T C 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,2:0.66667:deepvariant:18,11,0
- chr4 135046506 . G A 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:14,11,0
- chr4 135046528 . T C 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:20,10,0
- chr4 135046577 . C T 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:18,9,0
- chr4 135046579 . C A 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,2:0.66667:deepvariant:18,9,0
- chr4 135046629 . A G 22.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:22,10,0
- chr4 145109133 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:17,5:0.22727:deepvariant:2,0,24
- chr4 150479139 . G A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,18,0
- chr4 150479144 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:10,14,0
- chr4 150479153 . G A 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:11,15,0
- chr4 153411764 . C T 23.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:5:3,2:0.40000:small_model:23,0,39
- chr4 160982557 . G A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:8:6,2:0.25000:small_model:16,0,38
- chr4 160982586 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:8:6,2:0.25000:small_model:11,0,29
- chr4 160982603 . A G 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:8:6,2:0.25000:small_model:16,0,41
- chr4 167242620 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:13,2:0.12500:deepvariant:0,0,22
- chr4 169928141 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:10:7,3:0.30000:deepvariant:9,0,26
- chr4 169928576 . T C 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:10:3,7:0.70000:deepvariant:18,0,17
- chr4 169928837 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:7,3:0.30000:deepvariant:4,0,17
- chr4 178049301 . A T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,3:0.23077:deepvariant:10,0,17
- chr4 179556785 . C T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:3:1,2:0.66667:small_model:18,0,10
- chr4 179557233 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:2,9,0
- chr4 182293001 . T C 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:17,12,0
- chr4 182294650 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr4 184582043 . T G 6.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:39:32,7:0.17949:5,21,0
- chr4 185103109 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,2:0.11111:deepvariant:1,0,32
- chr4 189711425 . C G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:11,5,0
- chr4 189711477 . C G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:3:1,2:0.66667:small_model:12,0,21
- chr4 189711544 . G A 30.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:30,17,0
- chr4 189776393 . T C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:0,0,0
- chr4 189778543 . G A 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,16,0
- chr4 189778571 . T A 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:1,2:0.66667:deepvariant:16,14,0
- chr4 189778573 . T C 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:deepvariant:18,18,0
- chr4 189778623 . T C 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:19,11,0
- chr4 189893556 . C A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:17:14,3:0.17647:deepvariant:7,0,34
- chr4 189893588 . C A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:14,3:0.17647:deepvariant:5,0,32
- chr4 190307051 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:14,5:0.26316:deepvariant:1,0,22
- chr4 190307080 . A G 28.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:19:11,7:0.36842:small_model:28,0,45
- chr4 190307139 . A G 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:19:11,7:0.36842:small_model:14,0,33
- chr4 190307140 . G A 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:18:11,7:0.38889:small_model:14,0,31
- chr4 190561047 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:small_model:11,14,0
- chr4 190561064 . A T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,6:1.00000:deepvariant:7,22,0
- chr4 190561070 . T C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,6:1.00000:deepvariant:5,22,0
- chr4 190561073 . T C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,6:1.00000:deepvariant:5,21,0
- chr4 190561080 . T G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,22,0
- chr4 190561085 . G C 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:6:0,6:1.00000:small_model:20,21,0
- chr4 191807743 . C T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:5:2,3:0.60000:small_model:15,0,29
- chr4 191851174 . C G 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:16:12,4:0.25000:small_model:11,0,39
- chr4 191851444 . A T 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:17:13,4:0.23529:small_model:10,0,37
- chr4 192149966 . A C 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:10:4,6:0.60000:small_model:22,0,28
- chr4 192258568 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,9,0
- chr4 192327807 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:13:3,10:0.76923:deepvariant:10,6,0
- chr4 192327869 . C T 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:13:2,11:0.84615:deepvariant:17,8,0
- chr4 192327885 . T C 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:1,10:0.83333:deepvariant:17,0,0
- chr4 192327930 . C T 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:12:1,10:0.83333:small_model:19,0,8
- chr4 192327993 . C G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,7:1.00000:deepvariant:12,14,0
- chr4 192328034 . A G 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:14,11,0
- chr4 192328044 . T C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:13,9,0
- chr4 192328060 . T A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:10,10,0
- chr4 192328062 . T C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:11,11,0
- chr4 192328102 . T G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,14,0
- chr4 192328126 . G T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,13,0
- chr4 192328202 . T C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:4,8,0
- chr4 192328208 . A C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:12,17,0
- chr4 192328247 . T C 33.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:33,17,0
- chr4 192328260 . A G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:3:1,2:0.66667:small_model:8,0,19
- chr4 192328316 . C T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:6:2,3:0.50000:small_model:15,0,23
- chr4 192328385 . T A 28.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:28,21,0
- chr4 192328476 . T C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:17,12,0
- chr4 192328512 . G A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:12,17,0
- chr4 192328553 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,10,0
- chr4 192328797 . T C 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:10:6,4:0.40000:small_model:15,0,28
- chr4 192329002 . T C 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:3:1,2:0.66667:small_model:14,0,24
- chr4 192329015 . G A 32.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:32,19,0
- chr4 192329071 . T A 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:17,18,0
- chr4 192329110 . G T 24.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:24,14,0
- chr4 192329175 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:0,0,1
- chr4 192329202 . A T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:11,14,0
- chr4 192329204 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,15,0
- chr4 192329520 . G A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:16,14,0
- chr4 192329524 . A T 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:17,13,0
- chr4 192329612 . A G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:7:5,2:0.28571:deepvariant:9,0,15
- chr4 192332731 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:4,1,0
- chr4 192332804 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:1,3:0.75000:deepvariant:0,0,4
- chr4 192332810 . C T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:5:1,4:0.80000:deepvariant:6,0,9
- chr4 192332956 . G A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:6:2,4:0.66667:small_model:12,0,12
- chr4 192332984 . G A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:3,3,0
- chr4 192333017 . T C 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:4,3,0
- chr4 192333030 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:8,8,0
- chr4 192333040 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:4,3,0
- chr4 192333085 . G C 27.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:6:0,6:1.00000:small_model:27,21,0
- chr4 192333086 . C T 26 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:6:1,5:0.83333:small_model:25,0,25
- chr4 192333132 . T C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:1,6:0.85714:small_model:19,11,0
- chr4 192333145 . G A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:2,5:0.71429:small_model:17,0,23
- chr4 192333162 . C T 30.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:7:2,5:0.71429:small_model:30,0,35
- chr4 192333195 . A T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:2,5:0.71429:deepvariant:18,0,21
- chr4 192333197 . C T 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:2,5:0.71429:deepvariant:20,0,20
- chr4 192333199 . A C 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,7:1.00000:deepvariant:22,10,0
- chr4 192333201 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:7:5,2:0.28571:deepvariant:9,0,19
- chr4 192333231 . C G 34.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:34:8:4,4:0.50000:small_model:34,0,47
- chr4 192333306 . G A 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:9:4,5:0.55556:small_model:20,0,31
- chr4 192333454 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:3,6:0.66667:small_model:13,0,10
- chr4 192333490 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:2,6:0.75000:deepvariant:2,0,14
- chr4 192333513 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:7,5:0.41667:deepvariant:2,0,18
- chr4 192333651 . A G 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:11:5,6:0.54545:small_model:19,0,34
- chr4 192333707 . T C 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:10:1,8:0.60000:deepvariant:19,9,8
- chr4 192333753 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:16:9,7:0.43750:small_model:11,0,20
- chr4 192664099 . C T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,3:0.50000:deepvariant:3,16,0
- chr4 193010305 . T A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:10,4:0.28571:deepvariant:4,0,17
- chr4 193012055 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:0,10,0
- chr4 193012056 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:9,11,0
- chr4 193012065 . T A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:6,8,0
- chr4 193232880 . T C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:4,11,0
- chr4 193348695 . G A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:7,3:0.30000:small_model:11,0,26
- chr4 193348923 . G C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:7,3:0.30000:small_model:8,0,29
- chr5 392 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:1,0,11
- chr5 408631 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:11,2:0.15385:deepvariant:0,0,10
- chr5 408699 . C G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:11,2:0.15385:deepvariant:4,0,17
- chr5 948943 . G T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:15:13,2:0.13333:small_model:12,0,41
- chr5 949120 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:15:12,3:0.20000:small_model:10,0,44
- chr5 972603 . T C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:9:7,2:0.22222:small_model:10,0,44
- chr5 1003564 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:11,4:0.26667:deepvariant:2,0,17
- chr5 1003610 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:10,4:0.28571:deepvariant:3,0,17
- chr5 1003882 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,4:0.30769:deepvariant:3,0,15
- chr5 1004094 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,2:0.18182:deepvariant:0,0,20
- chr5 1004919 . G A 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:5:3,2:0.40000:deepvariant:15,0,29
- chr5 1004975 . G C 27 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,5:0.83333:deepvariant:26,6,0
- chr5 1197966 . T G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:13:7,6:0.46154:small_model:13,0,23
- chr5 1198026 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:12:4,8:0.66667:deepvariant:1,0,0
- chr5 1198070 . C G 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:4,9:0.69231:deepvariant:5,1,0
- chr5 1198073 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:3,0,8
- chr5 1198098 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:3,0,8
- chr5 1198112 . C G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:13:7,6:0.46154:small_model:10,0,16
- chr5 1198134 . T G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:7,6:0.46154:deepvariant:0,0,6
- chr5 1198154 . C G 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:6,7:0.53846:deepvariant:7,0,13
- chr5 1198428 . T G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:15:8,7:0.46667:small_model:12,0,20
- chr5 1198764 . G T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:16:8,8:0.50000:deepvariant:5,0,20
- chr5 1237920 . A G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:8,2:0.20000:deepvariant:5,0,21
- chr5 1242151 . G C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.28571:deepvariant:8,10,8
- chr5 1242326 . G C 30.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:2,9:0.27273:deepvariant:27,13,30
- chr5 1242644 . C G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:4,7:0.63636:deepvariant:8,0,6
- chr5 1325552 . T G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:12,4:0.23529:deepvariant:2,0,20
- chr5 1325704 . G T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:8,4:0.33333:deepvariant:11,0,15
- chr5 1325718 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,2:0.16667:deepvariant:2,0,15
- chr5 1326122 . T G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:9,2:0.18182:deepvariant:6,0,21
- chr5 1326221 . G A 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:10:6,3:0.30000:deepvariant:17,0,22
- chr5 1326326 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:4,4:0.50000:deepvariant:5,0,7
- chr5 1451446 . C T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:7,4:0.36364:small_model:12,0,26
- chr5 1452252 . G A 28.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:18:11,7:0.38889:small_model:28,0,42
- chr5 1452284 . G A 25.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:18:11,7:0.38889:small_model:25,0,38
- chr5 1452306 . C T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:19:12,7:0.36842:small_model:8,0,27
- chr5 1452394 . G A 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:23:15,8:0.34783:deepvariant:8,0,19
- chr5 1452444 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:23:15,8:0.34783:deepvariant:2,0,13
- chr5 1452454 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:23:15,8:0.34783:1,9,0
- chr5 1452764 . G A 32 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:32:18:11,7:0.38889:small_model:32,0,45
- chr5 1995259 . T C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,9,0
- chr5 1995270 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:6,13,0
- chr5 1995333 . G A 30.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:30,16,0
- chr5 2011923 . G A 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:5:3,2:0.40000:small_model:15,0,30
- chr5 3191417 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,15
- chr5 3191421 . T G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:9:5,4:0.44444:deepvariant:6,0,17
- chr5 3241260 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:5:3,2:0.40000:small_model:8,0,20
- chr5 3241316 . A G 27.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:3:1,2:0.66667:small_model:18,0,34
- chr5 3241526 . G A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:5:3,2:0.40000:deepvariant:4,0,23
- chr5 3241568 . G A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:5:3,2:0.40000:small_model:8,0,24
- chr5 3243038 . G A 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:3:1,2:0.66667:small_model:20,0,18
- chr5 3579225 . T C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:19:11,8:0.42105:small_model:12,0,16
- chr5 5883031 . G C 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:10:7,3:0.30000:small_model:15,0,47
- chr5 5883175 . G C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:6,2:0.25000:small_model:10,0,50
- chr5 6704658 . T C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:9,3:0.15789:deepvariant:1,4,19
- chr5 14286301 . C A 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:16:13,3:0.18750:small_model:18,0,45
- chr5 19384539 . G A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:27:12,14:0.51852:small_model:11,0,22
- chr5 33388180 . A T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:9:5:2,3:0.60000:small_model:0,15,33
- chr5 37807612 . A T 15.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:11:20:14,6:0.30000:14,12,0
- chr5 46824647 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,19,0
- chr5 46824681 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,3:0.60000:deepvariant:0,17,0
- chr5 46824720 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:2:5:0,3:0.60000:deepvariant:2,29,1
- chr5 46829734 . A C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,21,0
- chr5 46829746 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,16,0
- chr5 46829749 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,17,0
- chr5 46829780 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,21,0
- chr5 46829789 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:0,21,0
- chr5 46829793 . C T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,27,0
- chr5 46829796 . T G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,21,0
- chr5 46829806 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,19,0
- chr5 46829807 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,32,0
- chr5 46829818 . A G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,22,0
- chr5 46829845 . G T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,22,0
- chr5 46829846 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,18,0
- chr5 46829911 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,20,0
- chr5 46829915 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,22,0
- chr5 46829918 . T G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,21,0
- chr5 46829994 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,21,0
- chr5 46830064 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,21,0
- chr5 46830079 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,21,0
- chr5 46830190 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,22,0
- chr5 46830193 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,22,0
- chr5 46830201 . T A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,21,0
- chr5 46966356 . T G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,15,0
- chr5 46966381 . G T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,15,0
- chr5 46966484 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr5 46966651 . C G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,15,0
- chr5 46966677 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr5 46966843 . T G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr5 46966928 . T A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr5 46966948 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,17,0
- chr5 46966961 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,17,0
- chr5 46967213 . G A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:12,25,0
- chr5 46967248 . T G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,6:0.85714:deepvariant:9,20,0
- chr5 46967498 . C G 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:10:0,10:1.00000:deepvariant:19,23,0
- chr5 47055422 . T G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,22,0
- chr5 47055447 . G T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,19,0
- chr5 47055550 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:5,17,0
- chr5 47055717 . C G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,19,0
- chr5 47102692 . T A 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,2:0.50000:deepvariant:18,37,0
- chr5 47265837 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,14,0
- chr5 47330790 . A C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:small_model:10,19,0
- chr5 47392737 . T A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,25,0
- chr5 47405320 . A C 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,27,0
- chr5 47405344 . T C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,32,0
- chr5 47405399 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,24,0
- chr5 47414549 . G A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr5 47414570 . T G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,20,0
- chr5 47414574 . A C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,22,0
- chr5 47417423 . G T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr5 47446180 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr5 47446181 . G C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr5 47446197 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr5 47531884 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,14,0
- chr5 47597315 . T C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,25,0
- chr5 47762140 . A G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,32,0
- chr5 47762791 . G C 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,16,0
- chr5 47762819 . A T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,23,0
- chr5 47763490 . T A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,20,0
- chr5 47763528 . C A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr5 47763585 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr5 47763593 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr5 47763601 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr5 47763895 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr5 47815224 . T G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,26,0
- chr5 47840459 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:4,8,0
- chr5 47841055 . G A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,26,0
- chr5 47841141 . G T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,22,0
- chr5 47841145 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,22,0
- chr5 47841218 . C G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,21,0
- chr5 47841267 . A T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,19,0
- chr5 47841271 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,19,0
- chr5 47841787 . A T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,20,0
- chr5 47841789 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,24,0
- chr5 47855211 . G A 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,29,0
- chr5 47856219 . T A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,18,0
- chr5 47856912 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,2:0.66667:deepvariant:13,21,0
- chr5 47910674 . T C 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:18,28,0
- chr5 47927065 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,26,0
- chr5 47927089 . G C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr5 47927259 . T A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,49,0
- chr5 48081620 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,23,0
- chr5 48081668 . T G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:17,27,0
- chr5 48162433 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,14,0
- chr5 48170145 . T A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:0,8,0
- chr5 48296052 . G T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:9,19,0
- chr5 48904439 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:2,8,0
- chr5 48907498 . A T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,19,0
- chr5 48907703 . G C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:7,18,0
- chr5 48919786 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,2:0.50000:deepvariant:0,12,0
- chr5 48961011 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:8,21,0
- chr5 49177890 . C G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,23,0
- chr5 49670304 . C G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,18,0
- chr5 49708052 . G C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,19,0
- chr5 49708954 . A T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,19,0
- chr5 49708959 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,25,0
- chr5 49739111 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,20,0
- chr5 49739136 . C A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,21,0
- chr5 49739145 . T A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,22,0
- chr5 49742942 . A G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:3,4:0.57143:deepvariant:6,0,4
- chr5 49747163 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:2,22,0
- chr5 49757887 . T G 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:9:2,7:0.77778:deepvariant:18,6,0
- chr5 49758035 . A G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:1,7:0.87500:deepvariant:12,0,4
- chr5 49758101 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:1,3:0.75000:deepvariant:2,0,2
- chr5 49758165 . G A 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:18,9,0
- chr5 49758344 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,13,0
- chr5 49758350 . T A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,12,0
- chr5 49758403 . T C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:8,13,0
- chr5 49758418 . G C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:12,12,0
- chr5 49758476 . A T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:11,9,0
- chr5 49824819 . T A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,4:0.66667:small_model:9,98,0
- chr5 49847563 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,21,0
- chr5 49847564 . G T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:4,22,0
- chr5 49848297 . T A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,18,0
- chr5 49848927 . T A 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,27,0
- chr5 49849007 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,21,0
- chr5 49857944 . A T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:12:3:0,3:1.00000:small_model:0,20,5
- chr5 49859751 . T C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:17:8:0,8:1.00000:small_model:0,25,1
- chr5 49862901 . T C 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,25,0
- chr5 49863717 . G T 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:0,3:0.42857:deepvariant:14,28,0
- chr5 50124088 . A C 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:22,20,0
- chr5 50130285 . C G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:2,4:0.66667:deepvariant:6,13,0
- chr5 50130299 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,12,0
- chr5 50130385 . T C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,3:0.50000:deepvariant:6,13,0
- chr5 50130520 . A C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:1,6:0.85714:small_model:12,21,0
- chr5 50130618 . C G 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,24,0
- chr5 50130789 . G C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:4,8,0
- chr5 50130796 . T C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:1,5:0.83333:deepvariant:7,15,0
- chr5 50130801 . G A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:deepvariant:10,15,0
- chr5 50130840 . T C 23.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:8:0,8:1.00000:small_model:23,29,0
- chr5 50131024 . A T 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:14:0,14:1.00000:small_model:24,24,0
- chr5 50131047 . C T 21.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:14:0,14:1.00000:small_model:21,23,0
- chr5 50133476 . A G 26.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:12:0,12:1.00000:small_model:26,23,0
- chr5 50133557 . C G 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:10:0,10:1.00000:small_model:23,22,0
- chr5 50438458 . A G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:17,19,0
- chr5 50438739 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,10,0
- chr5 50438772 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,12,0
- chr5 50439140 . G C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,15,0
- chr5 50439210 . G T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:deepvariant:9,20,0
- chr5 50440586 . T C 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:17,10,0
- chr5 50440587 . T A 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:11,9,0
- chr5 50440611 . A T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:16,7,0
- chr5 50440763 . T C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:13,7,0
- chr5 50440789 . G C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:9,10,0
- chr5 50446374 . G T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr5 50446375 . T G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,15,0
- chr5 50446386 . T A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,19,0
- chr5 50446394 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,20,0
- chr5 50446403 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,18,0
- chr5 50446408 . G C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,3:0.75000:deepvariant:9,18,0
- chr5 50446420 . T C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,22,0
- chr5 50446421 . A T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:9,21,0
- chr5 50446425 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,20,0
- chr5 50446428 . G C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:9,21,0
- chr5 50446431 . T C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:8,19,0
- chr5 50446437 . T A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:9,21,0
- chr5 50446453 . A C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:deepvariant:13,22,0
- chr5 50446456 . G T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:11,22,0
- chr5 50446457 . A C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:12,22,0
- chr5 50446464 . A C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,21,0
- chr5 50446470 . C T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:9,18,0
- chr5 50446484 . G T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:9,22,0
- chr5 50446485 . T G 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:16,21,0
- chr5 50446513 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,19,0
- chr5 50446514 . T A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,18,0
- chr5 50457115 . G A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:12,14,0
- chr5 50457121 . A C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,22,0
- chr5 50457126 . G T 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:9,20,0
- chr5 50457169 . C G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:12,14,0
- chr5 50457175 . C G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:4,22,0
- chr5 50457184 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:9,19,0
- chr5 50457192 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,23,0
- chr5 50457200 . A C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,5:1.00000:deepvariant:6,24,0
- chr5 50457215 . A T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:small_model:10,15,0
- chr5 50457235 . T A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:small_model:11,19,0
- chr5 50490464 . A G 15.2 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:14:5,9:0.64286:13,3,0
- chr5 50491298 . C A 16.2 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:19:7,12:0.63158:15,7,0
- chr5 50498688 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:2,13,0
- chr5 50498693 . C A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:7,16,0
- chr5 50498706 . T A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:9,15,0
- chr5 50498712 . T C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:8,17,0
- chr5 50498736 . A T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:10,14,0
- chr5 50498754 . T A 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,15,0
- chr5 50498759 . C T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,15,0
- chr5 50498760 . C A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,16,0
- chr5 50498768 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,16,0
- chr5 50498788 . G C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,19,0
- chr5 50498796 . A G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,19,0
- chr5 50498797 . A G 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:17,9,0
- chr5 50498936 . T G 23.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:2:0,2:1.00000:small_model:23,23,0
- chr5 50498961 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,21,0
- chr5 50498971 . C G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,19,0
- chr5 50499000 . T G 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,16,0
- chr5 50499005 . T A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr5 50499008 . A T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr5 50499010 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr5 50499022 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,15,0
- chr5 50499051 . T G 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,15,0
- chr5 50499056 . T C 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,2:0.66667:small_model:23,19,0
- chr5 50499066 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,20,0
- chr5 50499147 . T C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,15,0
- chr5 50673549 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:1,13,0
- chr5 50673992 . A C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,4:0.57143:deepvariant:1,7,0
- chr5 50674135 . C T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:3,5:0.62500:deepvariant:4,0,4
- chr5 50674416 . C A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:3,5:0.62500:deepvariant:6,0,3
- chr5 57264281 . A T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:6,5:0.45454:small_model:11,0,27
- chr5 67095039 . G T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:13,11,0
- chr5 75984786 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:20:13,7:0.35000:0,10,0
- chr5 75984787 . T A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:20:13,7:0.35000:small_model:14,0,30
- chr5 85676734 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:0,4,0
- chr5 91081733 . G T 34.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:34,18,0
- chr5 91081785 . A G 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:21,16,0
- chr5 100899462 . G C 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:deepvariant:9,0,29
- chr5 100899574 . C T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:9:7,2:0.22222:deepvariant:7,0,15
- chr5 106893157 . A G 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:4:1,3:0.75000:small_model:18,0,21
- chr5 109857583 . G A 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:17:13,4:0.23529:deepvariant:19,0,27
- chr5 109857593 . G A 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:17:13,4:0.23529:deepvariant:20,0,29
- chr5 109857706 . A G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:17:13,4:0.23529:deepvariant:17,0,34
- chr5 109857740 . A G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:17:13,4:0.23529:small_model:13,0,40
- chr5 122603831 . T C 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:small_model:19,9,0
- chr5 122875038 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:22:18,4:0.18182:0,18,0
- chr5 138200698 . T G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,4:0.40000:deepvariant:1,0,6
- chr5 138201719 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,4:0.36364:deepvariant:0,0,10
- chr5 145474567 . A T 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:3:1,2:0.66667:small_model:13,0,16
- chr5 145718477 . T C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:9:6,3:0.33333:small_model:14,0,32
- chr5 145908976 . T A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:3:20:6,5:0.25000:deepvariant:5,2,17
- chr5 146708813 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:11,3:0.21429:deepvariant:0,0,23
- chr5 162192501 . G A 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:23,10,0
- chr5 171293320 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,11,0
- chr5 171293321 . G C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,14,0
- chr5 171293334 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr5 171293354 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,20,0
- chr5 171293364 . T G 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:17,14,0
- chr5 171293377 . A G 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:20,19,0
- chr5 171293418 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,15,0
- chr5 171293439 . A T 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,2:0.66667:small_model:16,10,0
- chr5 171293440 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr5 171293562 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:7,12,0
- chr5 171293585 . C G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr5 171293705 . A G 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:3:1,2:0.66667:small_model:19,0,19
- chr5 173119207 . G A 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:24,11,0
- chr5 175285308 . T C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:29:7,20:0.68966:deepvariant:2,18,0
- chr5 177137630 . G T 30.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:deepvariant:30,13,0
- chr5 177137683 . G T 38 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:37,18,0
- chr5 179831107 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,10,0
- chr5 179831150 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:1,5,0
- chr5 179831179 . T A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:0.50000:deepvariant:13,26,6
- chr5 179831250 . C A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:7:3,3:0.42857:small_model:9,0,28
- chr5 179831273 . C T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:2,2:0.40000:small_model:15,0,20
- chr5 179831296 . C A 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:3,2:0.40000:small_model:14,0,20
- chr5 179831318 . G C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:3,4,0
- chr5 179831435 . C T 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:6:1,4:0.66667:small_model:18,0,13
- chr5 180184355 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,14,0
- chr5 180184367 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,15,0
- chr5 180184368 . G C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,16,0
- chr5 180184370 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr5 180184378 . G A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr5 180184381 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr5 180184390 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr5 180184391 . G T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,15,0
- chr5 180184412 . G C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,19,0
- chr5 180184413 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,21,0
- chr5 180184416 . C T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,20,0
- chr5 180184422 . C T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,20,0
- chr5 180184434 . C G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,20,0
- chr5 180184445 . C A 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:6,19,0
- chr5 180184447 . G T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,20,0
- chr5 180184453 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,19,0
- chr5 180184459 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,17,0
- chr5 180184461 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,18,0
- chr5 180184467 . C G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,18,0
- chr5 180184473 . G C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,20,0
- chr5 180184483 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr5 180184492 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr5 181041623 . C T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:10:8,2:0.20000:small_model:10,0,36
- chr5 181170176 . T C 27.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:6:2,4:0.66667:small_model:27,0,27
- chr5 181172254 . C T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:17:11,5:0.29412:deepvariant:9,0,12
- chr5 181172294 . T A 34.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:15:0,15:0.33333:deepvariant:33,23,8
- chr5 181172306 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:1,5:0.83333:deepvariant:3,0,3
- chr5 181172428 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:5:0,5:1.00000:deepvariant:0,0,0
- chr5 181375723 . C A 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:17:2:0,2:1.00000:small_model:0,22,6
- chr6 692642 . A T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:25:14,7:0.28000:deepvariant:2,0,17
- chr6 1067103 . G A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:3:1,2:0.66667:small_model:17,0,15
- chr6 1067123 . G C 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:15,17,0
- chr6 1067157 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,11,0
- chr6 1768783 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,12,0
- chr6 1768830 . G T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:3,6,0
- chr6 1768838 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:2,6,0
- chr6 1768852 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,8,0
- chr6 13307574 . T G 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:small_model:21,11,0
- chr6 19511328 . T C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:11:6,4:0.36364:small_model:14,0,27
- chr6 27354208 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:6,2:0.25000:deepvariant:1,0,20
- chr6 34992492 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:18:11,7:0.38889:2,10,0
- chr6 35534047 . A G 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:7,2:0.22222:small_model:15,0,36
- chr6 35534050 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:6,2:0.22222:small_model:9,0,32
- chr6 35534209 . G C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:9:6,3:0.33333:small_model:12,0,35
- chr6 37332031 . T G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:7,4:0.36364:small_model:12,0,31
- chr6 37332081 . T G 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:22,9,0
- chr6 37332109 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:1,9,0
- chr6 42352574 . C T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:6:4,2:0.33333:deepvariant:13,0,25
- chr6 42352608 . C T 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:6:4,2:0.33333:deepvariant:13,0,23
- chr6 42352642 . C T 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:6:3,3:0.50000:small_model:21,0,26
- chr6 42352676 . C T 28.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:27:7:3,4:0.57143:small_model:28,0,33
- chr6 43795185 . T C 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,21,0
- chr6 43795215 . T C 26 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:2:0,2:1.00000:small_model:25,20,0
- chr6 43795300 . C T 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,17,0
- chr6 43795342 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,9,0
- chr6 43795379 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,11,0
- chr6 44460851 . G A 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:12:10,2:0.16667:small_model:15,0,41
- chr6 49764648 . T C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:2,8:0.20000:deepvariant:13,10,17
- chr6 51044978 . A G 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:5:2,3:0.60000:small_model:21,0,19
- chr6 51045042 . A G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:11,3:0.21429:small_model:10,0,39
- chr6 58018520 . C T 26.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:14:10,4:0.28571:small_model:26,0,48
- chr6 58761095 . T A 23.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:5:0,5:1.00000:small_model:23,25,0
- chr6 58761102 . T G 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:21,26,0
- chr6 61107569 . C A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:9:6:0,6:1.00000:small_model:0,29,21
- chr6 61148129 . G T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:11,3:0.21429:deepvariant:0,0,16
- chr6 61148677 . T A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:10,6:0.37500:deepvariant:2,0,18
- chr6 61148681 . A T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:16:10,6:0.37500:small_model:8,0,24
- chr6 61148692 . G A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:11,5:0.31250:deepvariant:4,0,18
- chr6 61148703 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:9,6:0.37500:deepvariant:1,0,17
- chr6 61148709 . C G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:8,7:0.46667:deepvariant:3,0,20
- chr6 61148710 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:8,7:0.43750:deepvariant:1,0,20
- chr6 61148739 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:9,7:0.43750:deepvariant:2,0,20
- chr6 61148751 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:9,5:0.33333:deepvariant:0,0,18
- chr6 61148760 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:16:9,7:0.43750:deepvariant:6,0,19
- chr6 61148778 . G T 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:16:10,6:0.37500:small_model:20,0,35
- chr6 61148787 . T C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:16:9,6:0.37500:small_model:11,0,20
- chr6 61148800 . G T 45.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:16:0,6:0.37500:deepvariant:44,38,38
- chr6 61148802 . G T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:9,7:0.43750:deepvariant:3,0,19
- chr6 61148804 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:9,7:0.43750:deepvariant:2,0,18
- chr6 61148807 . A C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:9,7:0.43750:deepvariant:3,0,19
- chr6 61148820 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:9,7:0.43750:deepvariant:2,0,18
- chr6 61148886 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:11,8:0.42105:deepvariant:0,0,21
- chr6 61148899 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:9,9:0.47368:deepvariant:0,0,22
- chr6 61148907 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:19:12,7:0.36842:small_model:9,0,31
- chr6 61148919 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:10,9:0.47368:deepvariant:0,0,22
- chr6 61148922 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:10,9:0.47368:deepvariant:2,0,22
- chr6 61148942 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:10,9:0.47368:deepvariant:0,0,20
- chr6 61148943 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:10,9:0.47368:deepvariant:1,0,22
- chr6 61148946 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:10,9:0.47368:deepvariant:2,0,21
- chr6 61148950 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:11,8:0.42105:deepvariant:1,0,21
- chr6 61148954 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:11,8:0.42105:deepvariant:1,0,22
- chr6 61148975 . T A 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:19:11,8:0.42105:small_model:16,0,31
- chr6 61148978 . T C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:19:10,8:0.42105:small_model:8,0,25
- chr6 61148980 . G T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:19:10,8:0.42105:small_model:13,0,24
- chr6 61148998 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:10,9:0.47368:deepvariant:1,0,24
- chr6 61149001 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:11,8:0.42105:deepvariant:3,0,24
- chr6 61149006 . C A 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:19:10,7:0.36842:small_model:9,0,28
- chr6 61149007 . G C 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:17:9,8:0.47059:small_model:16,0,27
- chr6 61149036 . C T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:17:10,7:0.41177:small_model:13,0,31
- chr6 61149038 . T A 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:18:11,7:0.38889:deepvariant:7,0,26
- chr6 61149043 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:18:10,7:0.38889:small_model:10,0,24
- chr6 61149052 . G T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:18:10,8:0.44444:small_model:11,0,29
- chr6 61149057 . T A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:18:11,7:0.38889:small_model:11,0,27
- chr6 61149191 . A T 13.658 PASS H;FAU=4;FCU=0;FGU=0;FTU=3;RAU=5;RCU=0;RGU=0;RTU=5 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:17:0.4706:0,8:0:6:0,0:9:0:0:8:6:0:0:0
- chr6 61149414 . T C 10.884 PASS H;FAU=0;FCU=4;FGU=0;FTU=4;RAU=0;RCU=4;RGU=0;RTU=6 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:10:18:0.4444:0,8:0:6:0,0:0:8:0:10:0:0:0:6
- chr6 61149512 . G A 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:20:13,7:0.35000:small_model:18,0,98
- chr6 61149665 . C T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:20:12,8:0.40000:small_model:14,0,27
- chr6 61149899 . A T 15.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:18:11,7:0.38889:13,2,0
- chr6 61164259 . C A 7.3 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:43:31,12:0.27907:6,22,0
- chr6 61164571 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:46:29,17:0.36957:2,10,0
- chr6 61164589 . A G 8.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:8:46:29,17:0.36957:7,17,0
- chr6 61165002 . T C 8.3 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:45:30,15:0.33333:6,7,0
- chr6 61165165 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:42:27,15:0.35714:6,21,0
- chr6 61165767 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:44:32,12:0.27273:3,15,0
- chr6 61165892 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:43:33,10:0.23256:2,9,0
- chr6 61246282 . C G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,24,0
- chr6 61246285 . G T 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,41,0
- chr6 61246296 . C A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,19,0
- chr6 61246301 . A C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,19,0
- chr6 61246310 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,19,0
- chr6 61246312 . T G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,18,0
- chr6 61246321 . A C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,21,0
- chr6 61246324 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,20,0
- chr6 61246325 . A C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,22,0
- chr6 61246333 . G T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,21,0
- chr6 61246336 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,20,0
- chr6 61246337 . A T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,21,0
- chr6 61246340 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,19,0
- chr6 61246343 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr6 61246346 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,19,0
- chr6 61246354 . C A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr6 61246363 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,20,0
- chr6 61246367 . T C 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,21,0
- chr6 61246458 . C G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr6 61246464 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr6 61246468 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr6 61246474 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr6 61246478 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr6 61246480 . G T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,17,0
- chr6 61246486 . C T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,17,0
- chr6 61246505 . C A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,17,0
- chr6 61246511 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr6 61246513 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr6 61246785 . T A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,17,0
- chr6 61246793 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr6 61246794 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr6 61246795 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr6 61246798 . A C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr6 61266771 . G T 8.446 PASS H;FAU=0;FCU=0;FGU=8;FTU=4;RAU=0;RCU=0;RGU=7;RTU=5 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:24:0.375:0,9:0:19:0,0:0:0:15:9:0:0:19:0
- chr6 61314649 . C A 18.571 PASS H;FAU=4;FCU=2;FGU=0;FTU=0;RAU=8;RCU=8;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:18:22:0.5455:0,12:0:13:0,0:12:10:0:0:0:13:0:0
- chr6 61322798 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:1,0,13
- chr6 61322801 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:8,6:0.42857:deepvariant:0,0,14
- chr6 61322820 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:14:8,5:0.35714:small_model:14,0,30
- chr6 61351853 . A T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:8:1,6:0.75000:deepvariant:6,14,0
- chr6 61351858 . A G 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:8:2,6:0.75000:deepvariant:6,15,0
- chr6 61351860 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:2,6:0.75000:deepvariant:3,16,0
- chr6 61351873 . T C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:0,8:1.00000:small_model:10,19,0
- chr6 61351883 . G C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:2,6:0.75000:deepvariant:5,16,0
- chr6 61351905 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:0,5:0.71429:deepvariant:1,16,0
- chr6 61351957 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,5:0.83333:deepvariant:3,16,0
- chr6 61351961 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,4:0.66667:deepvariant:1,17,0
- chr6 61351966 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:2,16,0
- chr6 61351982 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:0,13,0
- chr6 61352064 . T G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,20,0
- chr6 61352073 . C A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,17,0
- chr6 61352081 . C A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:9,19,0
- chr6 61352358 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr6 61352367 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,18,0
- chr6 61352386 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,20,0
- chr6 61352389 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr6 61352391 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,16,0
- chr6 61352416 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,16,0
- chr6 61352448 . T G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,21,0
- chr6 61352684 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,22,0
- chr6 61353123 . C G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,18,0
- chr6 61353276 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,20,0
- chr6 61353294 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,18,0
- chr6 61353358 . T G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,20,0
- chr6 61353374 . T G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,27,0
- chr6 61353636 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr6 61353646 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr6 61354640 . G A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,34,0
- chr6 61354718 . T A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,32,0
- chr6 61355659 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,2:0.40000:deepvariant:1,19,0
- chr6 61355672 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,22,0
- chr6 62201917 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,3:0.21429:deepvariant:2,0,31
- chr6 66906099 . A G 32.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:32:14:5,9:0.64286:small_model:32,0,39
- chr6 66906385 . T C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:11:5,6:0.54545:small_model:17,0,32
- chr6 66906587 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:11:7,4:0.36364:small_model:8,0,29
- chr6 66906644 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,22
- chr6 67892706 . C T 32.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:0,2:0.14286:deepvariant:30,38,22
- chr6 73656668 . G A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:6:3,3:0.50000:small_model:12,0,24
- chr6 74779366 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,12,0
- chr6 74779380 . G A 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:14,14,0
- chr6 80790553 . A T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:20:14,6:0.30000:small_model:11,0,24
- chr6 88336824 . A G 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:19,18,0
- chr6 108179337 . G A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:7,6:0.46154:small_model:8,0,24
- chr6 108179420 . G T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:2,0,23
- chr6 108179424 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:1,0,22
- chr6 108179438 . T A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:8,6:0.42857:deepvariant:2,0,22
- chr6 108179440 . G C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:7,6:0.42857:small_model:9,0,23
- chr6 116934821 . A G 10.252 PASS H;FAU=6;FCU=0;FGU=5;FTU=0;RAU=3;RCU=0;RGU=8;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:10:22:0.5909:0,13:0:4:0,0:9:0:13:0:4:0:0:0
- chr6 130578654 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:14:10,4:0.28571:deepvariant:10,0,28
- chr6 140877201 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:11,3:0.17647:small_model:1,0,32
- chr6 148266830 . G C 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:12:8,4:0.33333:small_model:20,0,38
- chr6 151397841 . G C 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:3:1,2:0.66667:small_model:17,0,22
- chr6 151397858 . G A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:3:1,2:0.66667:small_model:12,0,13
- chr6 152699789 . A T 25.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:9:0,9:1.00000:small_model:25,29,0
- chr6 152699798 . T G 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:9:0,9:1.00000:small_model:20,23,0
- chr6 152699823 . G T 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:9:0,9:1.00000:small_model:17,19,0
- chr6 152699840 . T C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:13,22,0
- chr6 152699841 . G T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,2,0
- chr6 152699849 . T A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:5,7,0
- chr6 152699859 . T G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:6,8,0
- chr6 152699876 . T C 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:14,19,0
- chr6 152699883 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:11,19,0
- chr6 152699885 . G C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,5:1.00000:deepvariant:19,20,0
- chr6 152699926 . T C 32.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:5:0,5:1.00000:small_model:32,22,0
- chr6 152700701 . G C 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:8:0,8:1.00000:small_model:18,20,0
- chr6 158532278 . G C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:7:5,2:0.28571:small_model:10,0,29
- chr6 158532295 . A G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:5,2:0.28571:small_model:13,0,38
- chr6 158532375 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,18
- chr6 158532390 . G A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:5,2:0.28571:deepvariant:3,0,18
- chr6 158532433 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,21
- chr6 158532606 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:1,0,28
- chr6 158536609 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:2:37:29,7:0.18919:0,3,0
- chr6 158536782 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:2:41:34,7:0.17073:0,3,0
- chr6 158539985 . T C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:3:1,2:0.66667:small_model:16,0,15
- chr6 158539990 . C G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:16,11,0
- chr6 158540004 . G A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:16,10,0
- chr6 158543025 . A C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:11,2:0.15385:small_model:8,0,35
- chr6 158544889 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:6:1,5:0.83333:deepvariant:0,2,0
- chr6 158544908 . C T 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:6:0,6:1.00000:small_model:19,22,0
- chr6 158544922 . C A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:3,9,0
- chr6 158544924 . A C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:deepvariant:11,19,0
- chr6 158544929 . C T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:3,6,0
- chr6 158544941 . G T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:5,6,0
- chr6 158544942 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:2,8,0
- chr6 158544953 . A G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:13,17,0
- chr6 158544958 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,12,0
- chr6 158544961 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,5:0.83333:deepvariant:6,18,0
- chr6 158544974 . T C 38.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:31:6:0,6:1.00000:small_model:38,31,0
- chr6 158544979 . G C 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:7:0,7:1.00000:deepvariant:7,17,0
- chr6 158544983 . G C 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:7:0,7:1.00000:small_model:17,29,0
- chr6 158544993 . G A 22.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:7:0,7:1.00000:small_model:22,25,0
- chr6 158544996 . G C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,6:1.00000:deepvariant:9,16,0
- chr6 158545008 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:7:0,7:1.00000:small_model:9,23,0
- chr6 158545023 . T A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,7:1.00000:small_model:11,18,0
- chr6 158545064 . G C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:0,7:1.00000:small_model:13,21,0
- chr6 158547471 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:13,3:0.18750:deepvariant:2,0,21
- chr6 164693692 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:2,0,18
- chr6 167661288 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,4:0.57143:deepvariant:2,4,0
- chr6 167661526 . G T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:9,6:0.31579:deepvariant:9,0,23
- chr6 167664061 . G A 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:15:9,5:0.33333:small_model:16,0,28
- chr6 167664107 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:10,5:0.33333:deepvariant:1,0,10
- chr6 167664123 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:16:10,4:0.25000:small_model:9,0,27
- chr6 167664199 . G A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:17:10,7:0.41177:small_model:11,0,27
- chr6 167664315 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:12,6:0.33333:deepvariant:3,0,16
- chr6 168131319 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,14,0
- chr6 168131320 . A G 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:8,9,0
- chr6 168131944 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,10,0
- chr6 168805494 . A C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:14:11,3:0.21429:deepvariant:8,0,19
- chr6 169150849 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:11:20:10,8:0.40000:10,22,0
- chr6 169336188 . A G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:20:14,6:0.30000:small_model:13,0,26
- chr6 169336813 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:18:12,6:0.33333:7,9,0
- chr6 169336934 . A G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:19:14,5:0.26316:small_model:9,0,30
- chr6 169337333 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,7:1.00000:deepvariant:0,3,0
- chr6 169337335 . A T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:0,7:0.77778:deepvariant:2,6,0
- chr6 169337673 . A G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:19:12,7:0.36842:small_model:13,0,24
- chr6 169337920 . A G 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:17:9,8:0.47059:small_model:18,0,24
- chr6 169575640 . A G 29 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:8:2,2:0.25000:deepvariant:28,39,12
- chr6 169580891 . A G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:4,4,0
- chr6 169580942 . C A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,9,0
- chr6 169580945 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,11,0
- chr6 169580955 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,8,0
- chr6 169613230 . C G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,16,0
- chr6 169937123 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:5:3,2:0.40000:deepvariant:5,0,17
- chr6 169940046 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:7,2:0.20000:deepvariant:0,0,23
- chr6 169940048 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:8,2:0.20000:deepvariant:1,0,24
- chr6 169940053 . T C 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:10:6,4:0.40000:deepvariant:21,0,33
- chr6 169940112 . T C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:11:7,4:0.36364:small_model:8,0,35
- chr6 169940171 . T C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:12:8,3:0.25000:deepvariant:11,0,29
- chr6 170263141 . C T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:11,2:0.15385:small_model:8,0,34
- chr6 170282418 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:10,6,0
- chr6 170282430 . G A 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:15,7,0
- chr6 170282461 . T G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:3:0,3:1.00000:deepvariant:11,0,9
- chr6 170282462 . T C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:3:0,3:1.00000:deepvariant:11,0,2
- chr6 170282479 . A G 25.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:8:5,3:0.37500:small_model:25,0,43
- chr6 170282519 . T C 29.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:8:4,4:0.50000:small_model:29,0,43
- chr6 171254528 . T G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:3:1,2:0.66667:small_model:12,0,18
- chr6 171254538 . A G 25.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:3:1,2:0.66667:small_model:25,0,27
- chr6 171254597 . G A 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:15,14,0
- chr6 171254632 . C T 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,18,0
- chr6 171255924 . G T 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:3:1,2:0.66667:small_model:24,0,25
- chr6 171256024 . G T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,9,0
- chr6 171256058 . G T 22.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:22,12,0
- chr6 171257226 . C T 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:23:17,6:0.26087:small_model:25,0,50
- chr6 171385858 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:7,5:0.41667:deepvariant:2,0,17
- chr6 171506430 . T A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:16:10,5:0.31250:small_model:12,0,26
- chr6 172083017 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:0,0,1
- chr6 172083084 . A C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,13,0
- chr6 172083179 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,12,0
- chr6 172124029 . G T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:5,6:0.54545:deepvariant:0,5,0
- chr6 172124031 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:4,6:0.54545:deepvariant:2,6,0
- chr6 172124039 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:3,7:0.70000:deepvariant:3,8,0
- chr7 229434 . C A 21.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:10:8,2:0.20000:small_model:21,0,48
- chr7 229474 . C A 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:10:8,2:0.20000:small_model:20,0,48
- chr7 305983 . C T 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:6,4,0
- chr7 305994 . C T 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:6:1,5:0.83333:small_model:14,0,17
- chr7 306049 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:4:1,3:0.75000:deepvariant:4,0,3
- chr7 306060 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:4:1,3:0.75000:deepvariant:5,0,5
- chr7 306075 . C T 29.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:7:3,4:0.57143:small_model:29,0,38
- chr7 306156 . C T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:7:4,3:0.42857:small_model:15,0,32
- chr7 306213 . C T 32.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:33:6:3,3:0.50000:small_model:32,0,93
- chr7 306260 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:3,3:0.50000:deepvariant:3,0,16
- chr7 306262 . C T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:6:3,3:0.50000:deepvariant:4,0,20
- chr7 306270 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:3,3:0.50000:deepvariant:3,0,18
- chr7 306285 . G A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:6:3,3:0.50000:small_model:8,0,19
- chr7 306290 . G A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:6:3,3:0.50000:small_model:13,0,26
- chr7 652886 . C T 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:11:8,3:0.27273:small_model:13,0,37
- chr7 653769 . G A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:10:8,2:0.20000:deepvariant:15,0,28
- chr7 653859 . T C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:8,2:0.20000:deepvariant:11,0,33
- chr7 993395 . C T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:7:2,5:0.71429:small_model:11,0,13
- chr7 993399 . C T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:2,5:0.71429:deepvariant:17,0,15
- chr7 994122 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,2:0.18182:deepvariant:0,0,17
- chr7 1009546 . A G 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:17:12,5:0.29412:small_model:14,0,31
- chr7 1295964 . C G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,11,0
- chr7 1298788 . C G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,17,0
- chr7 1298838 . C G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:16,11,0
- chr7 1301003 . C G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:4,11,0
- chr7 1303835 . T G 23.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:6:0,6:1.00000:small_model:23,27,0
- chr7 1304290 . C G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:3,2:0.40000:small_model:9,0,18
- chr7 1304430 . C G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:6,3:0.33333:deepvariant:0,0,14
- chr7 1304482 . A C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:4,4:0.50000:deepvariant:3,0,14
- chr7 1384800 . A G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:9,3:0.25000:deepvariant:9,0,28
- chr7 4091241 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:2:0,2:1.00000:deepvariant:6,0,1
- chr7 4091249 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:0,7:1.00000:small_model:11,20,0
- chr7 4091343 . G A 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:10:5,5:0.50000:small_model:21,0,35
- chr7 4091348 . G C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:10:5,5:0.50000:small_model:9,0,17
- chr7 4091496 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,5,0
- chr7 4091500 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:4,5,0
- chr7 4091504 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,7,0
- chr7 4092414 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:10,9,0
- chr7 4092980 . C G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:13,16,0
- chr7 12616460 . T C 8.5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:8:28:24,4:0.14286:7,18,0
- chr7 25542005 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:6,2:0.22222:deepvariant:4,0,32
- chr7 41478985 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:10,4:0.26667:deepvariant:1,0,15
- chr7 43711731 . G A 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:14:9,5:0.35714:small_model:17,0,33
- chr7 44906627 . A G 21.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:21,20,0
- chr7 56746724 . A C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:12:7:4,3:0.42857:small_model:0,0,22
- chr7 58567277 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,5:0.55556:deepvariant:1,0,7
- chr7 58567278 . T C 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:4:9:1,4:0.44444:deepvariant:16,16,13
- chr7 58567297 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,14
- chr7 58567434 . G C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,5:0.83333:small_model:10,17,0
- chr7 58567437 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:0,6,0
- chr7 58567466 . G C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:3,6:0.66667:deepvariant:0,10,0
- chr7 58769731 . G A 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:7:4,3:0.42857:small_model:14,0,22
- chr7 58968070 . C A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:4:0,4:1.00000:small_model:0,23,7
- chr7 59813273 . G T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:14,6,0
- chr7 60272017 . G A 46.5 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:20:10:0,2:0.20000:deepvariant:46,48,29
- chr7 60973477 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,17,0
- chr7 60973482 . A T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,19,0
- chr7 60973484 . A T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,19,0
- chr7 61087271 . C G 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:16,27,0
- chr7 61087290 . T G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:15,40,0
- chr7 61087303 . A G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,32,0
- chr7 61087459 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,21,0
- chr7 61135882 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,19,0
- chr7 61244911 . C T 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:14,13,0
- chr7 61244944 . T G 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:15,14,0
- chr7 61418460 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:5,9:0.64286:deepvariant:2,10,0
- chr7 61613989 . C G 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,14,0
- chr7 61633022 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr7 61833866 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:4,5:0.55556:deepvariant:0,7,0
- chr7 62131886 . T A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:3,3:0.50000:deepvariant:2,0,7
- chr7 62132463 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:2,3:0.60000:deepvariant:1,0,3
- chr7 62132988 . G T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:2,3:0.60000:deepvariant:3,0,5
- chr7 62155381 . C T 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:19,27,0
- chr7 62435452 . G C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr7 62810701 . C G 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:16,12,0
- chr7 62914588 . C A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:5,7:0.58333:deepvariant:2,1,0
- chr7 63147013 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:12,14,0
- chr7 63181472 . T C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:5,8,0
- chr7 63763293 . A G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:19:12,7:0.36842:small_model:10,0,26
- chr7 63763311 . A T 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:19:11,8:0.42105:small_model:12,0,35
- chr7 67760732 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:4,0,13
- chr7 71719375 . A G 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:2,6,0
- chr7 77676376 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,15,0
- chr7 94020945 . A T 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:2:0,2:1.00000:small_model:0,9,1
- chr7 94265263 . G C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:3:1,2:0.66667:small_model:0,5,20
- chr7 97992200 . C T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:8,2:0.18182:small_model:11,0,35
- chr7 99532223 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:0,0,26
- chr7 101315923 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr7 101315926 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,14,0
- chr7 102199866 . T C 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:17:14,3:0.17647:small_model:14,0,38
- chr7 103015823 . A G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:7,2,0
- chr7 106138894 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:2:20:8,4:0.20000:deepvariant:0,3,27
- chr7 115358177 . A T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:10,3:0.23077:deepvariant:4,0,16
- chr7 129419434 . T A 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:6:4,2:0.33333:small_model:17,0,17
- chr7 129419467 . G A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:16,14,0
- chr7 132080588 . T G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:12:10,2:0.16667:small_model:11,0,37
- chr7 132080637 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:10,2:0.16667:deepvariant:2,0,28
- chr7 133919113 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:27:20,7:0.25926:deepvariant:1,0,30
- chr7 135823007 . T A 14.247 PASS H;FAU=7;FCU=0;FGU=0;FTU=5;RAU=6;RCU=0;RGU=0;RTU=5 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:14:23:0.5652:0,13:0:5:0,0:13:0:0:10:0:0:0:5
- chr7 136043209 . G C 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:8:4,4:0.50000:small_model:24,0,41
- chr7 140030710 . C G 8.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:13:8,5:0.38462:7,9,0
- chr7 150118411 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:4,4:0.44444:deepvariant:2,0,25
- chr7 151040809 . G A 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:6:1,5:0.83333:small_model:22,0,12
- chr7 151040937 . G A 23.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:23,19,0
- chr7 151040938 . T C 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,24,0
- chr7 152395412 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:2,3:0.60000:deepvariant:1,0,17
- chr7 155236942 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,3:0.75000:deepvariant:6,12,0
- chr7 156973258 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,16,0
- chr7 156973292 . A G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,17,0
- chr7 156973329 . C T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:7,17,0
- chr7 156973383 . G A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:13,13,0
- chr7 156973399 . A G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,9,0
- chr7 156973434 . C T 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,17,0
- chr7 158235586 . C A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:25:13,9:0.36000:small_model:10,0,21
- chr7 159037553 . T G 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,15,0
- chr7 159037578 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,14,0
- chr7 159037580 . C T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,22,0
- chr7 159037592 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,13,0
- chr7 159037605 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,10,0
- chr7 159037612 . C A 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,19,0
- chr7 159037620 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:deepvariant:9,19,0
- chr7 159037624 . C G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,21,0
- chr7 159037632 . C T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:12,21,0
- chr7 159037650 . C T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,19,0
- chr7 159290932 . C T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:11,3,0
- chr7 159355910 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:15,5:0.23810:deepvariant:4,0,6
- chr7 159395207 . C G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:14:9,5:0.35714:small_model:12,0,31
- chr7 159663132 . C T 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:7:5,2:0.28571:small_model:15,0,35
- chr7 159663146 . G C 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:7:5,2:0.28571:small_model:15,0,36
- chr7 159729425 . G A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:5:3,2:0.40000:deepvariant:7,0,14
- chr7 159731297 . G A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:12:10,2:0.16667:deepvariant:7,0,25
- chr7 159731397 . G C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:4:2,2:0.50000:small_model:9,0,17
- chr7 159731439 . A G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:2,3:0.60000:small_model:14,0,22
- chr7 159731443 . A G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:5:2,3:0.60000:deepvariant:5,0,6
- chr7 159731487 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:5:2,2:0.40000:deepvariant:10,0,10
- chr7 159731491 . A G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,19,0
- chr7 159731492 . G C 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:19,23,0
- chr7 159731526 . C G 26.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:4:2,2:0.50000:small_model:26,0,35
- chr7 159804718 . C T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,14,0
- chr7 159805807 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,13,0
- chr7 159805833 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,13,0
- chr7 159805902 . G A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:6:4,2:0.33333:small_model:11,0,44
- chr7 159807285 . G A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,16,0
- chr7 159816947 . C T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,14,0
- chr7 159816952 . A G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,15,0
- chr7 159818488 . A G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:5:2,3:0.60000:small_model:12,0,14
- chr7 159818578 . A G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:4,7,0
- chr7 159818620 . A G 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:6,11,0
- chr7 159818662 . A G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:11,12,0
- chr7 159819148 . A G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:4:1,2:0.50000:small_model:11,0,19
- chr7 159822085 . A G 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:3,5:0.55556:deepvariant:5,3,0
- chr7 159952791 . A G 33.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:3:0,3:1.00000:small_model:25,19,0
- chr7 160182891 . C A 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:13:7,6:0.46154:small_model:17,0,33
- chr7 160182895 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:13:7,6:0.46154:small_model:10,0,22
- chr7 160182899 . T C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:13:7,6:0.46154:small_model:13,0,22
- chr7 160182917 . T A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:7,6:0.46154:small_model:9,0,21
- chr7 160338840 . G A 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:20,7,0
- chr7 160338851 . C T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:6,9,0
- chr7 160355887 . A C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:13,9,0
- chr7 160355894 . T G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:13,10,0
- chr7 160355905 . C T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:16,12,0
- chr7 160379174 . T A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:17:14,3:0.17647:deepvariant:7,0,22
- chr7 160379250 . C G 33.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:32,9,0
- chr7 160391021 . A G 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:2,2:0.25000:deepvariant:20,2,28
- chr7 160391052 . A G 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:1,3:0.37500:deepvariant:21,0,14
- chr7 160391083 . G A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:2,6:0.25000:deepvariant:8,0,12
- chr7 160431167 . G A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:1,8:0.33333:deepvariant:13,15,1
- chr7 160565296 . C A 28.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:0,14:0.40000:deepvariant:24,23,0
- chr7 160565302 . C A 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:14:0,14:0.42857:deepvariant:17,28,0
- chr7 160565416 . A G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:4,6:0.37500:deepvariant:6,0,4
- chr7 160565609 . A C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:10,5:0.31250:deepvariant:2,0,5
- chr8 770538 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:0,4:0.50000:deepvariant:8,0,4
- chr8 771757 . T A 31.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:4,7:0.27273:deepvariant:30,5,33
- chr8 771810 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:5,3:0.30000:deepvariant:1,0,19
- chr8 771969 . T G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:7,4:0.36364:deepvariant:6,0,22
- chr8 772089 . C G 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:10,3:0.23077:deepvariant:6,0,10
- chr8 772236 . G C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:3,4:0.57143:deepvariant:6,0,6
- chr8 823391 . C G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:6,3:0.33333:small_model:10,0,19
- chr8 887180 . G A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,25,0
- chr8 887535 . G C 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:18,16,0
- chr8 887554 . G A 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:11,11,0
- chr8 887577 . T C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:10,12,0
- chr8 887604 . T C 33.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:33,18,0
- chr8 955152 . T C 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:9:7,2:0.22222:small_model:18,0,41
- chr8 1227430 . C T 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:6:4,2:0.33333:small_model:17,0,33
- chr8 1242181 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,10,0
- chr8 1242244 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,6,0
- chr8 1242263 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,7,0
- chr8 1242276 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:7,11,0
- chr8 1242288 . C T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:7,12,0
- chr8 1242302 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,13,0
- chr8 1242417 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,13,0
- chr8 1242420 . A T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,14,0
- chr8 1242433 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr8 1242448 . C A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,16,0
- chr8 1242449 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr8 1242458 . T C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,13,0
- chr8 1242459 . T C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,14,0
- chr8 1242465 . G A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr8 1242467 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,13,0
- chr8 1242470 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,12,0
- chr8 1242481 . A G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,12,0
- chr8 1242482 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,12,0
- chr8 1242502 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,12,0
- chr8 1594930 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:10,13,0
- chr8 1594953 . T C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:11,12,0
- chr8 1594966 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:3:1,2:0.66667:deepvariant:0,2,0
- chr8 1594991 . T C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:3:1,2:0.66667:small_model:13,0,13
- chr8 1610464 . G A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,15,0
- chr8 2027956 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,10,0
- chr8 2027990 . T G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,19,0
- chr8 2027994 . G C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,19,0
- chr8 2028032 . T G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,18,0
- chr8 2028036 . G C 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,20,0
- chr8 2028041 . C T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,16,0
- chr8 2028042 . G A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,17,0
- chr8 2028984 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr8 2205440 . A C 30.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:16:3,4:0.25000:deepvariant:30,32,15
- chr8 3526957 . G A 30.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:31:23:11,12:0.52174:small_model:30,0,43
- chr8 3831495 . A G 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:23:12,11:0.47826:small_model:24,0,37
- chr8 4357182 . T C 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:0,8:0.18182:deepvariant:21,12,76
- chr8 4876941 . G C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,17,0
- chr8 5869008 . T C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,26,0
- chr8 5869024 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,15,0
- chr8 9933184 . T A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:8:6,2:0.25000:small_model:12,0,39
- chr8 12454821 . G A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:18:11,7:0.38889:small_model:14,0,28
- chr8 12454890 . C T 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:18:11,7:0.38889:deepvariant:6,0,25
- chr8 12455118 . T C 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:17:10,7:0.41177:deepvariant:7,0,21
- chr8 12455302 . G C 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:18:12,6:0.33333:deepvariant:8,0,25
- chr8 26508642 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:6:4,2:0.33333:small_model:13,0,37
- chr8 41832466 . T A 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:4,12,0
- chr8 44272641 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:0,0,7
- chr8 44272728 . G C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:4,3:0.42857:deepvariant:4,0,7
- chr8 44272933 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,9
- chr8 44273427 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:1,0,5
- chr8 44273847 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:3,0,8
- chr8 44273960 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,7
- chr8 44274111 . T A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,2:0.25000:deepvariant:1,0,10
- chr8 44274348 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:1,0,4
- chr8 44274788 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:9,2:0.18182:deepvariant:1,0,12
- chr8 44275040 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,2:0.14286:deepvariant:0,0,18
- chr8 44275114 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:12,2:0.14286:deepvariant:0,0,17
- chr8 44277434 . G C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:14:9,5:0.35714:deepvariant:6,0,15
- chr8 44379432 . T G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:1,3:0.75000:deepvariant:1,0,2
- chr8 44405376 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:7,5:0.41667:deepvariant:2,0,10
- chr8 44405459 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,5:0.41667:deepvariant:1,0,9
- chr8 44426305 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:16,6:0.27273:deepvariant:0,0,13
- chr8 44431374 . A G 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:14:8,6:0.42857:deepvariant:6,0,11
- chr8 44561232 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:5,4:0.44444:deepvariant:1,0,10
- chr8 44561298 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:5,5:0.50000:deepvariant:4,0,11
- chr8 44575364 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:12,9:0.42857:deepvariant:2,0,13
- chr8 44665262 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:9,6:0.40000:deepvariant:2,0,13
- chr8 44676317 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:9,6:0.40000:deepvariant:2,0,11
- chr8 44676855 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:6,6:0.50000:deepvariant:3,0,5
- chr8 44678866 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:8,7:0.46667:deepvariant:0,0,4
- chr8 44833400 . T A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:13,11,0
- chr8 44833614 . C T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:14,10,0
- chr8 44834362 . C A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,2,0
- chr8 44835725 . C A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:1,5:0.83333:deepvariant:7,11,0
- chr8 44835822 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:2,3:0.50000:deepvariant:0,0,5
- chr8 45091542 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:22:15,7:0.31818:deepvariant:3,0,16
- chr8 45094431 . G T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:29:19,9:0.31034:deepvariant:1,0,15
- chr8 45097591 . G C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:28:18,10:0.35714:deepvariant:3,0,18
- chr8 45116018 . A G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:32:18,14:0.43750:deepvariant:5,0,10
- chr8 45116076 . T A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:30:19,11:0.36667:deepvariant:7,0,14
- chr8 45192298 . A T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:18,8:0.30769:deepvariant:2,0,14
- chr8 45279898 . G C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:19,20,0
- chr8 45928057 . A C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:10:5,5:0.50000:deepvariant:1,2,0
- chr8 46182267 . C A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:9:2,7:0.77778:deepvariant:9,10,0
- chr8 46182684 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,5:0.41667:deepvariant:0,0,9
- chr8 46190693 . A C 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:36:26,10:0.27778:deepvariant:6,0,17
- chr8 46208829 . G T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:21:16,5:0.23810:deepvariant:6,0,22
- chr8 46227945 . A C 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:36:15,19:0.30556:deepvariant:15,6,6
- chr8 46227946 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:36:24,11:0.30556:deepvariant:1,0,9
- chr8 46227966 . C A 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:35:23,12:0.34286:deepvariant:6,0,13
- chr8 46228736 . T G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:33:23,10:0.30303:deepvariant:3,0,14
- chr8 46228794 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:34:24,10:0.29412:deepvariant:0,0,18
- chr8 46228852 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:33:23,10:0.30303:deepvariant:0,0,19
- chr8 46229074 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:32:24,8:0.25000:deepvariant:2,0,17
- chr8 46229546 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:16,6:0.27273:deepvariant:2,0,16
- chr8 46229561 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:16,6:0.27273:deepvariant:2,0,15
- chr8 46229619 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:16,6:0.27273:deepvariant:2,0,16
- chr8 46229855 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:23:17,6:0.26087:deepvariant:2,0,17
- chr8 46229935 . A C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:22:16,6:0.27273:deepvariant:4,0,18
- chr8 46230021 . T A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:22:16,6:0.27273:deepvariant:3,0,20
- chr8 46230168 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:21:16,5:0.23810:deepvariant:3,0,14
- chr8 46231454 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:13,3:0.18750:deepvariant:2,0,18
- chr8 46256482 . G A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:11,10:0.47619:deepvariant:5,0,2
- chr8 46271300 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:7,4:0.36364:deepvariant:3,0,10
- chr8 61535926 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:14,4:0.21053:deepvariant:1,0,27
- chr8 77773849 . C A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,18,0
- chr8 77774001 . C A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:14:0,14:0.14286:deepvariant:2,7,8
- chr8 77774028 . C A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:16:0,16:0.12500:deepvariant:8,13,14
- chr8 86377763 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:4:2,2:0.50000:deepvariant:2,0,14
- chr8 86382718 . G C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:4,6:0.60000:deepvariant:11,0,10
- chr8 86383435 . A C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:10,5:0.33333:deepvariant:5,0,17
- chr8 86397806 . A T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:2,0,11
- chr8 86505400 . C A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:6,2:0.25000:deepvariant:3,0,8
- chr8 86524284 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:17:4,13:0.76471:deepvariant:9,6,0
- chr8 86524296 . A T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:17:4,13:0.76471:deepvariant:13,3,0
- chr8 86524375 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:7,8:0.50000:deepvariant:4,0,12
- chr8 86524380 . A C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:7,8:0.53333:deepvariant:3,0,9
- chr8 86525360 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:5,2:0.28571:deepvariant:3,0,12
- chr8 86525882 . T G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,2:0.28571:deepvariant:2,0,11
- chr8 86587509 . G A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,4:0.80000:small_model:9,17,0
- chr8 86587522 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:3,9,0
- chr8 86587543 . T C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,20,0
- chr8 86590303 . G T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:4,1,0
- chr8 86590859 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:3,3:0.50000:deepvariant:3,2,0
- chr8 86591270 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,9,0
- chr8 86685503 . C T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:8,12,0
- chr8 86719444 . G A 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:6:0,6:1.00000:small_model:18,27,0
- chr8 86719452 . C T 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:19,30,0
- chr8 86719468 . A C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:16,27,0
- chr8 86719811 . C A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:5,4,0
- chr8 86720457 . G A 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:1,5:0.83333:small_model:14,18,0
- chr8 86720816 . A G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,3:0.75000:small_model:11,12,0
- chr8 86720818 . A T 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:20,23,0
- chr8 86721061 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,8,0
- chr8 86721099 . G A 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,24,0
- chr8 86721361 . T A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:7,14,0
- chr8 86721418 . C T 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,20,0
- chr8 86721496 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:10,16,0
- chr8 86721541 . T C 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,18,0
- chr8 86721580 . A G 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,20,0
- chr8 86721689 . A G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:1,2:0.66667:deepvariant:12,14,0
- chr8 86722083 . T G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,23,0
- chr8 86722143 . G A 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:19,19,0
- chr8 86722496 . C T 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:20,20,0
- chr8 86722784 . C G 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:20,20,0
- chr8 86722829 . A C 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:18,19,0
- chr8 86722879 . C G 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,23,0
- chr8 86723612 . G A 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,21,0
- chr8 86724043 . A G 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,15,0
- chr8 86724165 . C T 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:18,19,0
- chr8 90207332 . A G 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:10:3,7:0.70000:small_model:18,0,25
- chr8 91810266 . T G 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:13:11,2:0.15385:small_model:18,0,45
- chr8 107414170 . T G 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:22,8,0
- chr8 107414190 . T A 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:7,14,0
- chr8 127995099 . T G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:13:10,3:0.23077:small_model:9,0,26
- chr8 134337800 . C A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:21:15,6:0.28571:small_model:11,0,36
- chr8 138071673 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:4,3:0.42857:deepvariant:4,0,20
- chr8 138071822 . T C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:5,2:0.28571:deepvariant:3,0,22
- chr8 138071979 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:3:8:4,2:0.25000:deepvariant:2,2,37
- chr8 138072065 . T C 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:8:4,4:0.50000:small_model:19,0,30
- chr8 138072112 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:4,3:0.42857:small_model:11,0,25
- chr8 139466167 . G T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:18:14,4:0.22222:small_model:11,0,39
- chr8 139861315 . C G 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:13:10,3:0.23077:small_model:23,0,48
- chr8 142619800 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:11,5:0.31250:deepvariant:0,0,10
- chr8 142619855 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:7,3:0.20000:small_model:2,0,15
- chr8 142620183 . T A 35.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:16:0,16:0.56250:deepvariant:33,28,5
- chr8 142620224 . T G 32.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:15:1,6:0.40000:deepvariant:31,20,10
- chr8 142679838 . T A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:15:12,3:0.20000:small_model:11,0,36
- chr8 142679846 . C G 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:15:9,6:0.40000:small_model:16,0,25
- chr8 142679853 . G A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:15:10,5:0.33333:small_model:11,0,20
- chr8 142679903 . T G 13.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:15:8,7:0.46667:10,1,0
- chr8 142679920 . T A 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:15:10,5:0.33333:small_model:19,0,34
- chr8 142680002 . A T 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:14:8,5:0.35714:small_model:19,0,33
- chr8 142680010 . C G 11.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:14:7,7:0.50000:9,1,0
- chr8 142680666 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:7,2:0.22222:deepvariant:1,0,12
- chr8 142682019 . G C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:8,2:0.20000:deepvariant:13,0,32
- chr8 142682026 . G A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:8,2:0.20000:deepvariant:13,0,32
- chr8 142682108 . G A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:10:7,3:0.30000:small_model:14,0,30
- chr8 142682183 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:10,2:0.16667:deepvariant:2,0,27
- chr8 142682190 . G A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:9,2:0.16667:deepvariant:4,0,28
- chr8 142682224 . C G 31.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:32:12:7,4:0.33333:small_model:31,0,54
- chr8 142682265 . G C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:11:8,2:0.18182:deepvariant:7,0,26
- chr8 143150232 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:0,4:1.00000:deepvariant:3,0,0
- chr8 143489758 . G A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:4,5,0
- chr8 144186149 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:7:5,2:0.28571:small_model:9,0,30
- chr8 144311963 . A G 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:5:2,3:0.60000:small_model:18,0,19
- chr8 144825367 . C A 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:5,2:0.28571:small_model:19,0,43
- chr8 144825372 . C T 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:7:5,2:0.28571:small_model:22,0,36
- chr8 145182943 . T C 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:9:5,4:0.44444:small_model:18,0,32
- chr8 145182966 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:small_model:10,0,24
- chr8 145182997 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:7,2:0.22222:deepvariant:0,0,16
- chr8 145183090 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:8,2:0.20000:deepvariant:0,0,16
- chr8 145183110 . T A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:7,2:0.22222:small_model:9,0,24
- chr8 145183132 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:9:7,2:0.22222:deepvariant:9,0,26
- chr8 145183152 . G C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:9:7,2:0.22222:deepvariant:14,0,31
- chr8 145859638 . T G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:6,2:0.18182:deepvariant:5,0,30
- chr8 146120595 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,8,0
- chr8 146121281 . G C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:17,12,0
- chr8 146121286 . G A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:17,17,0
- chr8 146122001 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:14,4:0.22222:deepvariant:1,0,3
- chr9 315814 . G T 31.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:4:1,3:0.75000:small_model:31,0,33
- chr9 315997 . G T 27 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:26,6,0
- chr9 316058 . G T 27.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:26,6,0
- chr9 316180 . T G 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:5:1,4:0.80000:small_model:20,0,18
- chr9 316241 . T G 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:6:1,5:0.83333:small_model:21,0,17
- chr9 397634 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,4,0
- chr9 399358 . T A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,10,0
- chr9 399535 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:2,0,6
- chr9 399538 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:1,0,7
- chr9 399766 . A T 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:6:2,4:0.66667:small_model:19,0,20
- chr9 399829 . T A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:6:4,2:0.33333:small_model:8,0,26
- chr9 808813 . C T 28.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:28:216:19,193:0.89352:small_model:28,99,0
- chr9 808830 . C T 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:197:5,188:0.95432:small_model:99,99,0
- chr9 808838 . C T 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:209:4,195:0.93301:small_model:99,99,0
- chr9 808888 . C T 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:210:2,202:0.96191:small_model:99,99,0
- chr9 856073 . T G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr9 3971277 . G A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:14:10,4:0.28571:small_model:8,0,34
- chr9 4344803 . C A 13 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:6:25:0,14:0.56000:deepvariant:11,22,8
- chr9 8715256 . C A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:16:12,4:0.25000:small_model:8,0,40
- chr9 10287250 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:3:0,3:1.00000:small_model:0,29,15
- chr9 23165463 . C T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:24:11,13:0.54167:small_model:11,0,27
- chr9 23165467 . C T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:25:12,13:0.52000:small_model:9,0,22
- chr9 23165469 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:25:12,11:0.44000:small_model:9,0,23
- chr9 28185507 . G C 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:14:6,8:0.57143:small_model:9,0,50
- chr9 28200715 . A G 35.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:32:19:6,13:0.68421:small_model:35,34,0
- chr9 28201972 . A G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:22:12,10:0.45454:small_model:13,20,0
- chr9 28202068 . C G 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:16:0,13:0.81250:deepvariant:19,21,0
- chr9 29882553 . G A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:20:15,4:0.20000:small_model:10,0,36
- chr9 30522946 . T C 22.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:9:2:0,2:1.00000:small_model:0,12,8
- chr9 35515486 . A G 35.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:35:13:8,5:0.38462:small_model:35,0,52
- chr9 41054661 . A G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:11,5:0.31250:deepvariant:4,0,24
- chr9 41429069 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:1,0,7
- chr9 41429604 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:1,0,10
- chr9 41957327 . C A 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:21,10,0
- chr9 41957353 . C T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr9 41957354 . C A 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:18,13,0
- chr9 42475274 . G A 41 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:41:25:13,12:0.48000:small_model:41,0,53
- chr9 44976811 . T G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,13,0
- chr9 44976923 . T G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:11,12,0
- chr9 44976966 . C A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr9 44977011 . C A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,17,0
- chr9 44977037 . C A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,24,0
- chr9 44981781 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:9,4:0.30769:deepvariant:1,0,16
- chr9 44982004 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:8,4:0.33333:deepvariant:3,0,16
- chr9 44982263 . C G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,14
- chr9 44982614 . C T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,22,0
- chr9 44982617 . C A 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:18,28,0
- chr9 44982633 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,22,0
- chr9 44982643 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:2,22,0
- chr9 44982646 . T C 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:14,34,0
- chr9 44982665 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,24,0
- chr9 44982667 . A G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:8,24,0
- chr9 44982741 . C T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,27,0
- chr9 44982747 . C G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,23,0
- chr9 44982792 . C T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,21,0
- chr9 45045717 . C G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:3,5:0.62500:deepvariant:7,0,3
- chr9 45101313 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:2,0,12
- chr9 45130535 . C G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:22:9,13:0.59091:deepvariant:9,0,16
- chr9 45130689 . T A 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:22:10,12:0.54545:deepvariant:7,0,14
- chr9 45130762 . T G 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:22:10,12:0.54545:deepvariant:6,0,15
- chr9 45131108 . G T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:21:8,13:0.61905:deepvariant:11,0,15
- chr9 45131266 . A C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:22:8,14:0.63636:deepvariant:12,0,12
- chr9 45132153 . A G 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:6,14:0.70000:deepvariant:11,0,3
- chr9 45353769 . C T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,14,0
- chr9 45353774 . A G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,18,0
- chr9 45353801 . C T 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,13,0
- chr9 45634175 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,3,0
- chr9 45893660 . C G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr9 45918179 . G A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,21,0
- chr9 45959784 . G T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:27:20,7:0.25926:deepvariant:0,0,17
- chr9 46012862 . C A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,18,0
- chr9 46012875 . G A 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,17,0
- chr9 46077673 . T G 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,16,0
- chr9 46295663 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:13:6,7:0.53846:deepvariant:0,0,2
- chr9 46328942 . C T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:10,10:0.50000:deepvariant:3,0,2
- chr9 46329014 . C G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:21:10,11:0.52381:deepvariant:3,5,0
- chr9 46331999 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,14
- chr9 46524245 . C T 28.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:0,3:0.42857:deepvariant:26,32,2
- chr9 46635986 . T A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:13:1,12:0.92308:deepvariant:11,3,0
- chr9 46636015 . G T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:1,11:0.84615:deepvariant:13,1,0
- chr9 46636193 . G C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:12:5,7:0.58333:deepvariant:3,0,0
- chr9 46636234 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:6,6:0.50000:deepvariant:1,3,0
- chr9 46636236 . T C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:12:2,10:0.83333:deepvariant:11,5,0
- chr9 46765039 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:28:18,10:0.35714:deepvariant:0,0,19
- chr9 46765341 . G C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:30:19,11:0.36667:deepvariant:3,0,18
- chr9 46768670 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:13,4:0.23529:deepvariant:0,0,19
- chr9 46906300 . G T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,26,0
- chr9 46980822 . A G 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:16,25,0
- chr9 46980830 . T C 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,4:0.66667:deepvariant:8,22,0
- chr9 46980849 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:1,12,0
- chr9 46980860 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,4:0.66667:deepvariant:1,11,0
- chr9 47266414 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:4,5:0.50000:deepvariant:2,12,0
- chr9 47270568 . T G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:7,7:0.50000:deepvariant:2,0,11
- chr9 47280841 . A T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:3,4:0.57143:deepvariant:4,0,7
- chr9 47281267 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:1,0,9
- chr9 47281296 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:1,0,11
- chr9 47281438 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:1,0,7
- chr9 47383036 . G C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,12,0
- chr9 47389813 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:9,6:0.40000:deepvariant:0,0,10
- chr9 47390247 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:9,7:0.43750:deepvariant:3,0,13
- chr9 47415046 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:8,2:0.20000:deepvariant:1,0,11
- chr9 47415335 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:1,0,10
- chr9 47634577 . G T 34.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:27:37:23,14:0.37838:34,27,0
- chr9 48552554 . G C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:31:17,13:0.41936:small_model:15,0,27
- chr9 48553240 . A T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:25:16,9:0.36000:small_model:10,0,25
- chr9 48605274 . G C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:15,2:0.11111:deepvariant:0,0,20
- chr9 48649729 . C G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:21:10,11:0.52381:deepvariant:5,0,17
- chr9 48665878 . A T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:12,5:0.29412:deepvariant:6,0,25
- chr9 48666229 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:11,4:0.26667:deepvariant:3,0,22
- chr9 48666286 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:9,4:0.28571:small_model:9,0,32
- chr9 48689359 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:21:17,4:0.19048:deepvariant:5,0,34
- chr9 48689433 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:17,3:0.15000:deepvariant:3,0,29
- chr9 48689549 . G T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:18,3:0.14286:deepvariant:5,0,33
- chr9 48708568 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,18,0
- chr9 48708572 . T G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:3,20,0
- chr9 48708682 . G C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.28571:deepvariant:2,20,1
- chr9 48713675 . C T 14.917 PASS H;FAU=0;FCU=11;FGU=0;FTU=4;RAU=0;RCU=13;RGU=0;RTU=3 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:14:31:0.2258:0,7:0:12:0,0:0:24:0:7:0:12:0:0
- chr9 48719695 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:0,7,0
- chr9 48719840 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:2,9,0
- chr9 48720801 . C G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:8:5,3:0.37500:deepvariant:7,0,10
- chr9 48721086 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,2:0.22222:deepvariant:1,0,7
- chr9 48721241 . T C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:3,6:0.66667:deepvariant:9,0,5
- chr9 48721887 . G T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,4:0.33333:deepvariant:0,0,13
- chr9 48858715 . T C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:22:10,12:0.27273:deepvariant:13,6,46
- chr9 48875088 . C T 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:25:16,9:0.36000:deepvariant:13,0,12
- chr9 48876792 . T G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:15,4:0.21053:deepvariant:3,0,10
- chr9 48876918 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:15,3:0.16667:deepvariant:0,0,9
- chr9 48877317 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:15,2:0.11765:deepvariant:0,0,16
- chr9 48883954 . T G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,18,0
- chr9 48883958 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,18,0
- chr9 48883984 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:2,17,0
- chr9 48883990 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,20,0
- chr9 48884027 . T C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,16,0
- chr9 48884039 . C A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,23,0
- chr9 48884056 . A G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,21,0
- chr9 48884106 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,18,0
- chr9 48884115 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,2:0.66667:deepvariant:5,18,0
- chr9 48884165 . T G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,4:0.80000:small_model:12,19,0
- chr9 48884167 . C T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:deepvariant:12,23,0
- chr9 48884415 . T A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:11,28,0
- chr9 48884416 . G C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:13,34,0
- chr9 49053701 . T A 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:31:19,12:0.38710:deepvariant:12,0,7
- chr9 49144043 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,17,0
- chr9 49144059 . C T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:8,22,0
- chr9 49162178 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:0,20,0
- chr9 49171642 . A C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:14,26,0
- chr9 49223684 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,12,0
- chr9 49281889 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:4,3:0.42857:deepvariant:4,0,13
- chr9 49282001 . A T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:4,3:0.42857:deepvariant:5,0,13
- chr9 49282121 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:3,3:0.42857:deepvariant:1,0,7
- chr9 49291281 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:8,7:0.46667:deepvariant:2,0,7
- chr9 49291407 . G C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:8,5:0.38462:deepvariant:1,0,10
- chr9 49380819 . G T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:21:11,10:0.47619:deepvariant:6,0,15
- chr9 49415299 . T C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:5,8:0.61538:deepvariant:5,0,4
- chr9 49431746 . T A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:11:7,4:0.36364:deepvariant:7,0,18
- chr9 49440028 . C T 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:18,23,0
- chr9 49440593 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,23,0
- chr9 49440886 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,21,0
- chr9 49441163 . A C 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,21,0
- chr9 49441617 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,20,0
- chr9 49441841 . G C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,25,0
- chr9 49461128 . T A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,42,0
- chr9 49461170 . C G 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:2:0,2:1.00000:small_model:22,23,0
- chr9 49461346 . A T 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,20,0
- chr9 49461361 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,22,0
- chr9 49461376 . G C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,19,0
- chr9 49461635 . A G 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr9 49461691 . A G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,28,0
- chr9 49461885 . A T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,19,0
- chr9 49461981 . T C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,28,0
- chr9 49462059 . G C 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,17,0
- chr9 49462078 . C G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,18,0
- chr9 49462095 . A C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,24,0
- chr9 49462134 . A T 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,17,0
- chr9 49462153 . C T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,19,0
- chr9 49462242 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,20,0
- chr9 49462272 . C G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,22,0
- chr9 49462303 . C A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr9 49471955 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr9 49471962 . T G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr9 49472707 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr9 49473659 . T C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,31,0
- chr9 49473661 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,20,0
- chr9 49512294 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:1,0,16
- chr9 49512342 . C G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:1,0,18
- chr9 49512498 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,17
- chr9 49512592 . A C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,18
- chr9 49513090 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:2,0,16
- chr9 49522981 . A C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:13,4:0.23529:deepvariant:3,0,16
- chr9 49529454 . C A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:19:8,11:0.57895:deepvariant:9,0,16
- chr9 49529603 . G C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:18:7,11:0.61111:deepvariant:10,0,18
- chr9 49562069 . A C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:16,7:0.30435:deepvariant:4,0,18
- chr9 49562546 . C T 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:15:7,8:0.53333:deepvariant:7,0,11
- chr9 49705643 . G C 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:3,8:0.72727:deepvariant:9,2,0
- chr9 49714638 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,2:0.50000:deepvariant:1,21,0
- chr9 49733499 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:1,3:0.75000:deepvariant:8,20,0
- chr9 49733508 . A T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:7,21,0
- chr9 49733536 . A T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,29,0
- chr9 49733558 . T A 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:20,30,0
- chr9 49784600 . G C 32.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:10:0,10:0.40000:deepvariant:32,45,12
- chr9 49797096 . A T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,15,0
- chr9 49867533 . A C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,2,0
- chr9 49868096 . T G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:3:1,2:0.66667:deepvariant:0,0,4
- chr9 49870697 . A G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,18,0
- chr9 50094231 . C T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,20,0
- chr9 50097512 . A T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:12,31,0
- chr9 50115247 . A T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:2:0,2:1.00000:small_model:0,29,7
- chr9 50215310 . T C 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:19,19,0
- chr9 50215319 . C T 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,24,0
- chr9 50215511 . A C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,19,0
- chr9 50215583 . G C 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,3:0.75000:deepvariant:7,19,0
- chr9 50215646 . G C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:7,21,0
- chr9 50215683 . T C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,17,0
- chr9 50577623 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:3,17,0
- chr9 50708458 . G A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,22,0
- chr9 50782464 . T A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,28,0
- chr9 50844982 . C T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,9,0
- chr9 50845423 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,12,0
- chr9 50924682 . C A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr9 50926950 . T G 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,20,0
- chr9 50978255 . A C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:11,9:0.45000:deepvariant:3,0,12
- chr9 50978868 . A G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:14:5,8:0.57143:deepvariant:8,0,10
- chr9 50978937 . T A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:16:9,7:0.43750:deepvariant:9,0,13
- chr9 50979004 . T G 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:6,7:0.53846:deepvariant:12,0,11
- chr9 50979119 . T A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:5,7:0.58333:deepvariant:2,0,2
- chr9 50979167 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:12:6,5:0.41667:deepvariant:0,0,1
- chr9 50979429 . C G 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:7:0,7:1.00000:small_model:18,14,0
- chr9 50980802 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:2:0,2:1.00000:small_model:0,20,6
- chr9 50981432 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:10,4:0.28571:deepvariant:2,0,15
- chr9 51038402 . C T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:3,8:0.72727:deepvariant:12,0,16
- chr9 51079580 . A C 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:7,10:0.58824:deepvariant:6,0,19
- chr9 51088985 . G T 33.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:26:5,3:0.11539:small_model:33,40,20
- chr9 51097637 . A C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:17,8:0.32000:deepvariant:0,0,22
- chr9 51099169 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:11,7:0.36842:deepvariant:1,0,20
- chr9 51133718 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr9 51254628 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr9 51254643 . C A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,21,0
- chr9 51254645 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,21,0
- chr9 51293467 . T C 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,37,0
- chr9 51295187 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr9 51295199 . C A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,23,0
- chr9 51297010 . T C 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:20,30,0
- chr9 51297064 . G C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:small_model:9,23,0
- chr9 51305982 . C G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr9 51306445 . G C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,18,0
- chr9 51335055 . G A 27.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:4:0,4:1.00000:small_model:8,19,0
- chr9 51397437 . G A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:15,3:0.16667:deepvariant:0,0,16
- chr9 51397602 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:17,3:0.15000:deepvariant:2,0,21
- chr9 51397775 . C A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:13,3:0.18750:deepvariant:5,0,20
- chr9 51397976 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:15,3:0.16667:deepvariant:2,0,20
- chr9 51398057 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:15,3:0.16667:deepvariant:1,0,15
- chr9 51398526 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:16,4:0.20000:deepvariant:4,0,23
- chr9 51398841 . G C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:19,3:0.13636:deepvariant:0,0,21
- chr9 51399239 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:21:18,3:0.14286:deepvariant:3,0,20
- chr9 51421131 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:3,7:0.70000:deepvariant:2,13,0
- chr9 51422863 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:11,5:0.31250:deepvariant:1,0,7
- chr9 51423553 . G T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:4,9:0.60000:small_model:2,4,0
- chr9 51471541 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:37:29,8:0.21622:deepvariant:1,0,20
- chr9 51495902 . A C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:9:5,4:0.44444:deepvariant:8,0,14
- chr9 51496062 . C A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:5,5:0.50000:deepvariant:6,1,0
- chr9 51500648 . T A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:0.50000:deepvariant:9,48,0
- chr9 51501277 . T A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,4:0.40000:deepvariant:11,44,3
- chr9 51551002 . A T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:13,11,0
- chr9 51561153 . G C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:5,5:0.50000:deepvariant:4,0,8
- chr9 51594215 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:34:27,7:0.20588:deepvariant:1,0,23
- chr9 51630274 . A T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:25:14,11:0.44000:deepvariant:3,0,13
- chr9 51656976 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:17:9,7:0.41177:deepvariant:0,0,4
- chr9 51701500 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,48,0
- chr9 51701848 . C G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,32,0
- chr9 51705064 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,6:0.85714:deepvariant:3,9,0
- chr9 51818290 . C A 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:19,12,0
- chr9 51818730 . A T 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:18,16,0
- chr9 51857643 . T C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,28,0
- chr9 51857744 . C A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,17,0
- chr9 51858528 . C T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,23,0
- chr9 51858686 . C A 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:8:1,6:0.75000:small_model:12,25,0
- chr9 51858840 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:2,6:0.75000:deepvariant:1,17,0
- chr9 51858856 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.85714:deepvariant:0,20,0
- chr9 51858857 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,6:0.85714:deepvariant:3,19,0
- chr9 51866853 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:4,13,0
- chr9 51867554 . G T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:9,6:0.40000:deepvariant:5,0,17
- chr9 51880411 . G A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:4,14,0
- chr9 51880479 . A T 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,14,0
- chr9 52239806 . A C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:small_model:9,23,0
- chr9 52240591 . A C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:4,17,0
- chr9 52271852 . T G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,3:0.75000:small_model:13,30,0
- chr9 52271875 . G C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,19,0
- chr9 52271893 . A T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,22,0
- chr9 52271894 . A T 23.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:3:0,3:1.00000:small_model:23,30,0
- chr9 52271896 . A C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,32,0
- chr9 52272411 . G C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,18,0
- chr9 52272696 . T A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:11,36,0
- chr9 52272755 . T C 32 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:31:4:0,4:1.00000:small_model:32,39,0
- chr9 52272983 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,16,0
- chr9 52285332 . G T 33.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,2:0.50000:deepvariant:33,47,18
- chr9 52335996 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:14,7:0.33333:deepvariant:2,0,17
- chr9 52354667 . A C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr9 52355025 . G A 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,15,0
- chr9 52355135 . C T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,16,0
- chr9 52361735 . A C 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:6:0,5:0.83333:small_model:19,22,0
- chr9 52417505 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr9 52483306 . A T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,17,0
- chr9 52522416 . T G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,20,0
- chr9 52536063 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,27,0
- chr9 52538128 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,19,0
- chr9 52538192 . T A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,27,0
- chr9 52538210 . T A 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,23,0
- chr9 52587733 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr9 52592468 . T A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:11,15,0
- chr9 52655581 . G A 34.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:33:4:0,4:1.00000:small_model:34,41,0
- chr9 52655656 . A T 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:18,21,0
- chr9 52655669 . C A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,20,0
- chr9 52655704 . C G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,16,0
- chr9 52655742 . T C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:14,17,0
- chr9 52655751 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:11,21,0
- chr9 52655984 . G A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,23,0
- chr9 52655991 . A G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,21,0
- chr9 52655999 . C A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,25,0
- chr9 52656010 . T C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,25,0
- chr9 52656175 . A G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,24,0
- chr9 52656261 . T A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,18,0
- chr9 52656268 . C G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,27,0
- chr9 52883675 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,23,0
- chr9 52887268 . A C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,21,0
- chr9 52974425 . A C 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,36,0
- chr9 53079300 . C A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,25,0
- chr9 53093827 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr9 53099737 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr9 53099766 . A C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,25,0
- chr9 53099876 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,22,0
- chr9 53100040 . T C 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,30,0
- chr9 53100187 . T G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,19,0
- chr9 53129557 . T A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:6,15,0
- chr9 53235496 . C G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,23,0
- chr9 53371389 . C G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,21,0
- chr9 53371468 . A G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,31,0
- chr9 53371554 . C A 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:2:0,2:1.00000:small_model:24,51,0
- chr9 53425343 . T G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:16,16,0
- chr9 53556345 . C A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:9,4:0.30769:deepvariant:1,0,13
- chr9 53590189 . C G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,21,0
- chr9 53590354 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,10,0
- chr9 53590504 . C G 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:18,41,0
- chr9 53592198 . A G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,27,0
- chr9 53689941 . A T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr9 53738168 . G A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,27,0
- chr9 53752422 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr9 53805506 . T C 55.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:56:2:0,2:1.00000:small_model:55,99,0
- chr9 53805542 . T G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,22,0
- chr9 53806007 . G C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,33,0
- chr9 53806044 . G T 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:18,40,0
- chr9 53806058 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,39,0
- chr9 53806118 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,34,0
- chr9 53806172 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr9 53806528 . T C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,16,0
- chr9 53861482 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,21,0
- chr9 53861599 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr9 53861958 . C G 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,17,0
- chr9 53869647 . A G 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:20,30,0
- chr9 54028956 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:2,3:0.60000:deepvariant:1,0,6
- chr9 54029624 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:5,5:0.50000:deepvariant:2,0,7
- chr9 54089594 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:2,2:0.50000:deepvariant:0,0,0
- chr9 54312762 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,21,0
- chr9 54361139 . G C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,2:0.50000:deepvariant:4,14,0
- chr9 54370387 . A G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,20,0
- chr9 54372112 . C T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,30,0
- chr9 54376020 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:2,7:0.77778:deepvariant:3,10,0
- chr9 54380424 . A G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,17,0
- chr9 54440618 . T G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,33,0
- chr9 54455415 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,12,0
- chr9 54515767 . G C 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:4:0,4:1.00000:small_model:23,30,0
- chr9 54515945 . G T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:1,5:0.83333:deepvariant:6,18,0
- chr9 54516328 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:0,4:0.66667:deepvariant:4,19,0
- chr9 54553174 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,7:1.00000:deepvariant:0,17,0
- chr9 54553767 . T C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:9:2:0,2:1.00000:small_model:0,15,2
- chr9 54555597 . T A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:7,8:0.53333:deepvariant:3,0,11
- chr9 54585106 . T G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,25,0
- chr9 54585164 . G A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,20,0
- chr9 54601043 . T A 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:17,28,0
- chr9 54629553 . G T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,25,0
- chr9 54630809 . T C 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,27,0
- chr9 54631469 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,19,0
- chr9 54631760 . C A 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:18,29,0
- chr9 54635590 . G A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:9:0,9:1.00000:deepvariant:12,22,0
- chr9 54635730 . C A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,4:0.66667:deepvariant:4,19,0
- chr9 54735880 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr9 54739317 . C T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:small_model:8,26,0
- chr9 54739321 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,5:0.83333:small_model:11,24,0
- chr9 54742303 . C G 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:4:0,4:1.00000:small_model:24,25,0
- chr9 54742330 . G A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,35,0
- chr9 54861736 . G C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,17,0
- chr9 54861742 . A G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,23,0
- chr9 54861986 . A C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,18,0
- chr9 54862197 . G C 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:18,15,0
- chr9 54863245 . A C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,27,0
- chr9 54864079 . T G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,33,0
- chr9 54865172 . A C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,22,0
- chr9 54977483 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,30,0
- chr9 54978014 . A C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,17,0
- chr9 54978091 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,18,0
- chr9 55033842 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,26,0
- chr9 55088055 . C G 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:2,5:0.71429:deepvariant:6,14,0
- chr9 55088196 . G C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,5:0.83333:small_model:12,13,0
- chr9 55088629 . C G 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:2,5:0.71429:deepvariant:5,0,2
- chr9 55093304 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,23,0
- chr9 55093333 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr9 55093658 . T C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,26,0
- chr9 55169072 . T A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,20,0
- chr9 55228758 . G T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr9 55268091 . C A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:13,13,0
- chr9 55268101 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:8,19,0
- chr9 55268493 . G T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,20,0
- chr9 55268497 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:8,23,0
- chr9 55399639 . A G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr9 55399742 . G A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr9 55399838 . T C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,20,0
- chr9 55399843 . A C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,26,0
- chr9 55399850 . T G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,21,0
- chr9 55571356 . C G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:12,21,0
- chr9 55571555 . T G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,22,0
- chr9 55587636 . A G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:4,5:0.55556:deepvariant:6,0,8
- chr9 55588009 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:2,10,0
- chr9 55606275 . T A 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:20,30,0
- chr9 55632056 . C T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,26,0
- chr9 55707885 . T G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr9 55707895 . T C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr9 55709685 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,3:0.75000:small_model:10,18,0
- chr9 55787041 . T A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,18,0
- chr9 55787042 . T A 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,25,0
- chr9 55788318 . G A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr9 55788399 . T C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,17,0
- chr9 55814684 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,2:0.66667:deepvariant:6,17,0
- chr9 55815414 . G T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,3:0.75000:small_model:9,18,0
- chr9 55816454 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr9 55869823 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr9 55887064 . T C 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:2:0,2:1.00000:small_model:20,39,0
- chr9 55942368 . C A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,23,0
- chr9 55942369 . T A 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,24,0
- chr9 55942712 . A C 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,23,0
- chr9 55984636 . T C 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:25,22,0
- chr9 55984839 . A T 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:20,34,0
- chr9 56050560 . A C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,26,0
- chr9 56066027 . A C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,25,0
- chr9 56069751 . A C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,19,0
- chr9 56070711 . G C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,27,0
- chr9 56107322 . T C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,20,0
- chr9 56165528 . T A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:10:2,8:0.80000:deepvariant:4,18,0
- chr9 56165972 . T A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:1,7:0.87500:deepvariant:4,18,0
- chr9 56170163 . T A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:deepvariant:10,16,0
- chr9 56170515 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,10,0
- chr9 56172011 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,12,0
- chr9 56172076 . C A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,17,0
- chr9 56196033 . T C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,31,0
- chr9 56196484 . T A 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,22,0
- chr9 56274146 . C A 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:17,26,0
- chr9 56274873 . A T 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:20,31,0
- chr9 56321068 . A G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,23,0
- chr9 56322151 . G T 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,19,0
- chr9 56322437 . T A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,19,0
- chr9 56520486 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:2,17,0
- chr9 56520888 . C T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,22,0
- chr9 56520894 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,20,0
- chr9 56520928 . A G 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,37,0
- chr9 56536183 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,2:0.50000:deepvariant:2,14,0
- chr9 56811276 . C G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,23,0
- chr9 56839724 . T G 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,36,0
- chr9 56845324 . C G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,29,0
- chr9 56845837 . A T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,26,0
- chr9 56847172 . T G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,17,0
- chr9 56848620 . C T 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:13,14,0
- chr9 56848630 . G T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,19,0
- chr9 56848811 . T G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:11,19,0
- chr9 56867359 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:12:4,8:0.66667:deepvariant:1,12,0
- chr9 56868437 . C A 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:1,7:0.87500:deepvariant:6,5,0
- chr9 56868589 . C G 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:0,6:0.85714:small_model:19,20,0
- chr9 56870319 . A G 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:20,31,0
- chr9 56870859 . T G 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,4:0.80000:small_model:15,21,0
- chr9 56872186 . T G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,18,0
- chr9 56878118 . A G 25.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:6:0,6:1.00000:small_model:25,42,0
- chr9 56878292 . A C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:8:2,6:0.75000:small_model:8,26,0
- chr9 56878476 . C G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,17,0
- chr9 56912998 . C A 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,30,0
- chr9 56922815 . G A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:17,20,0
- chr9 56933982 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,20,0
- chr9 56971927 . T A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,23,0
- chr9 57019585 . C A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,18,0
- chr9 57019705 . C A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,37,0
- chr9 57019748 . T G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,26,0
- chr9 57096090 . G C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:1,5:0.83333:deepvariant:14,19,0
- chr9 57096233 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:0,19,0
- chr9 57098693 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,8,0
- chr9 57098817 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,14,0
- chr9 57098868 . T G 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:15,15,0
- chr9 57099026 . C A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:7,18,0
- chr9 57099028 . T A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,23,0
- chr9 57099197 . G C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,20,0
- chr9 57099394 . A C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,19,0
- chr9 57102587 . T C 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,5:0.71429:small_model:16,19,0
- chr9 57156642 . A G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,16,0
- chr9 57178567 . C G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,23,0
- chr9 57494769 . G A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,21,0
- chr9 57581417 . A T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,27,0
- chr9 57581677 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,32,0
- chr9 57582441 . A G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,31,0
- chr9 57583293 . C T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,3:0.75000:small_model:13,20,0
- chr9 57589181 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr9 57677436 . T A 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:2:0,2:1.00000:small_model:21,30,0
- chr9 57678010 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr9 57836699 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,22,0
- chr9 57836757 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr9 57837581 . A T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr9 57837633 . C G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,17,0
- chr9 57837652 . T C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,17,0
- chr9 57848392 . G C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,31,0
- chr9 57959741 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,20,0
- chr9 58015435 . G A 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:23,24,0
- chr9 58016467 . G A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:1,5:0.83333:deepvariant:17,12,0
- chr9 58016518 . G A 22.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:22,22,0
- chr9 58018767 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,16,0
- chr9 58161246 . G T 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:7:5:0,2:0.40000:deepvariant:23,43,6
- chr9 58329864 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,21,0
- chr9 58380189 . A T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,35,0
- chr9 58380888 . C T 25.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:2:0,2:1.00000:small_model:25,47,0
- chr9 58382530 . G T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,2:0.66667:deepvariant:13,17,0
- chr9 58401423 . A G 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,26,0
- chr9 58558745 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:0,21,0
- chr9 58608549 . T G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,5:0.83333:small_model:10,25,0
- chr9 58633360 . C A 26.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:3:0,3:1.00000:small_model:26,42,0
- chr9 58635406 . G C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,29,0
- chr9 58635533 . G A 22.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:2:0,2:1.00000:small_model:22,44,0
- chr9 58635538 . G A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,37,0
- chr9 58658530 . G A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:14,31,0
- chr9 58663415 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,21,0
- chr9 58672924 . A T 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,23,0
- chr9 58673237 . G A 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:2:0,2:1.00000:small_model:23,47,0
- chr9 58673475 . C G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,23,0
- chr9 58673477 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,27,0
- chr9 58673909 . T G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,17,0
- chr9 58673911 . G A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,25,0
- chr9 58675729 . A C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,16,0
- chr9 58675732 . C T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:18,23,0
- chr9 58684981 . T G 46.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:46:2:0,2:1.00000:small_model:46,60,0
- chr9 58685569 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,35,0
- chr9 58687716 . C G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,36,0
- chr9 58693432 . A G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,17,0
- chr9 58693435 . A T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,20,0
- chr9 58694069 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,11,0
- chr9 58695924 . G C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,17,0
- chr9 58725713 . A C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,17,0
- chr9 58795200 . C A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,16,0
- chr9 58970278 . C G 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:17,27,0
- chr9 58971637 . A G 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:21,26,0
- chr9 58971797 . A G 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:22,24,0
- chr9 59034966 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:1,23,0
- chr9 59039630 . C G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,21,0
- chr9 59039635 . C G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,27,0
- chr9 59055187 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,22,0
- chr9 59074076 . C G 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:17,20,0
- chr9 59573173 . G T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,19,0
- chr9 59576867 . G C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,30,0
- chr9 59592550 . T A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,21,0
- chr9 59592844 . T C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,15,0
- chr9 59592980 . G A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,14,0
- chr9 59592997 . A T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,14,0
- chr9 59615707 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:2,18,0
- chr9 59615779 . G A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,20,0
- chr9 59633843 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr9 59826630 . C G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,14,0
- chr9 59837118 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,15,0
- chr9 59923435 . T A 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,24,0
- chr9 60010966 . G T 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:18,17,0
- chr9 60011130 . A C 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:1,2:0.66667:deepvariant:7,18,0
- chr9 60011131 . A C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,25,0
- chr9 60011177 . G T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,23,0
- chr9 60011275 . A G 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:18,20,0
- chr9 60011289 . G A 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,18,0
- chr9 60011675 . A T 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:17,17,0
- chr9 60011761 . T C 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:15,16,0
- chr9 60012020 . G T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,18,0
- chr9 60012282 . T G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:deepvariant:10,12,0
- chr9 60012461 . G C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:5,16,0
- chr9 60012562 . C G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,20,0
- chr9 60012654 . A C 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:18,16,0
- chr9 60012914 . A G 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:18,15,0
- chr9 60078060 . G C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,16,0
- chr9 60078069 . T G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,18,0
- chr9 60082013 . G C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:0,0,10
- chr9 60084495 . A C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,3:0.75000:small_model:10,24,0
- chr9 60143875 . C A 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,35,0
- chr9 60144780 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:3,3:0.50000:deepvariant:3,0,8
- chr9 60272567 . G A 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:17,17,0
- chr9 60273713 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,7:0.87500:deepvariant:9,2,0
- chr9 60273864 . T G 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,7:0.87500:deepvariant:5,5,0
- chr9 60275883 . T A 24.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:4:0,4:1.00000:small_model:24,41,0
- chr9 60276157 . T A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,22,0
- chr9 60276335 . T G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,23,0
- chr9 60350666 . G T 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:20,24,0
- chr9 60350728 . C T 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,29,0
- chr9 60362640 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:2,2,0
- chr9 60363254 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:1,4:0.80000:deepvariant:3,0,1
- chr9 60377878 . T A 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,18,0
- chr9 60382438 . C A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr9 60429711 . G T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,14,0
- chr9 60429721 . C A 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,21,0
- chr9 60429752 . G T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,18,0
- chr9 60429775 . T C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,22,0
- chr9 60429790 . G T 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,24,0
- chr9 60429791 . G T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,29,0
- chr9 60429814 . T A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,25,0
- chr9 60429827 . C A 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,26,0
- chr9 60430034 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr9 60482481 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:11,4:0.26667:deepvariant:0,0,14
- chr9 60483410 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:11,6:0.35294:deepvariant:0,0,13
- chr9 60494065 . A C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,2:0.50000:deepvariant:4,16,0
- chr9 60494160 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,19,0
- chr9 60494573 . G C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,24,0
- chr9 60496042 . C T 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,43,0
- chr9 60496149 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,21,0
- chr9 60496154 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr9 60496159 . A G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,31,0
- chr9 60496204 . G A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,19,0
- chr9 60804251 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr9 60827747 . A T 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:21,28,0
- chr9 60828222 . C T 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:18,24,0
- chr9 60828227 . C T 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:20,29,0
- chr9 60905535 . T C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:18:10,8:0.44444:deepvariant:6,0,14
- chr9 60906508 . T A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:21:15,6:0.28571:deepvariant:2,0,18
- chr9 60906654 . C G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:15,6:0.28571:deepvariant:1,0,16
- chr9 60907196 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:15,7:0.31818:deepvariant:1,0,17
- chr9 60907964 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:12,8:0.40000:deepvariant:0,0,13
- chr9 60908451 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:14,6:0.30000:deepvariant:1,0,16
- chr9 60909600 . C G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:16:9,7:0.43750:deepvariant:7,0,12
- chr9 60926329 . C G 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:15,8,0
- chr9 60926552 . T A 22.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,7:1.00000:small_model:22,15,0
- chr9 60930880 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:9,7:0.43750:deepvariant:1,0,13
- chr9 60931338 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:7,7:0.50000:deepvariant:1,0,12
- chr9 60961534 . C G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,19,0
- chr9 60961687 . A G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:7,15,0
- chr9 60962070 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,5,0
- chr9 60962102 . G T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:3,4,0
- chr9 60963389 . A T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,21,0
- chr9 60963393 . T G 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,36,0
- chr9 60963437 . A C 27.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:27:3:0,3:1.00000:small_model:27,45,0
- chr9 60963525 . T G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,43,0
- chr9 61153620 . A C 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,20,0
- chr9 61153863 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,24,0
- chr9 61153886 . A G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,22,0
- chr9 61153895 . A C 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,21,0
- chr9 61154041 . C A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr9 61286356 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr9 61327543 . T C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,20,0
- chr9 61328902 . A C 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:7,19,0
- chr9 61331350 . A C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr9 61331377 . G A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,20,0
- chr9 61393138 . C A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,20,0
- chr9 61409927 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,11,0
- chr9 61493723 . T C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,21,0
- chr9 61525943 . C T 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,25,0
- chr9 61525982 . A T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,30,0
- chr9 61526086 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,33,0
- chr9 61527820 . C T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,22,0
- chr9 61529564 . G C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,25,0
- chr9 61539582 . G C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,20,0
- chr9 61541565 . T A 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,34,0
- chr9 61557483 . C A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:7,2:0.22222:deepvariant:0,0,12
- chr9 61560313 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,4:0.36364:deepvariant:0,0,8
- chr9 61659513 . C T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,25,0
- chr9 61680436 . A T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:17,17,0
- chr9 61795612 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr9 61798725 . T G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,25,0
- chr9 61798835 . A G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,19,0
- chr9 61798975 . A C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,36,0
- chr9 61799184 . T C 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,25,0
- chr9 61902480 . T G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,19,0
- chr9 61903125 . G T 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:16,18,0
- chr9 61983264 . A G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,21,0
- chr9 61988765 . A C 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:15,16,0
- chr9 62044170 . C T 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:16,17,0
- chr9 62110085 . T C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,20,0
- chr9 62111423 . G C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,23,0
- chr9 62186907 . A C 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,19,0
- chr9 62187575 . T A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,24,0
- chr9 62187581 . T G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,36,0
- chr9 62187864 . A T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,23,0
- chr9 62187865 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,32,0
- chr9 62188057 . G A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,17,0
- chr9 62207053 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:5,14,0
- chr9 62274999 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr9 62275783 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,21,0
- chr9 62275947 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,31,0
- chr9 62291257 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:2,13,0
- chr9 62297559 . A C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,17,0
- chr9 62298160 . C T 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:14,29,0
- chr9 62298349 . G A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,32,0
- chr9 62298579 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,34,0
- chr9 62392349 . G C 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,19,0
- chr9 62392419 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr9 62392458 . G C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,20,0
- chr9 62392493 . A C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,14,0
- chr9 62430257 . T A 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:14,13,0
- chr9 62442435 . A C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,23,0
- chr9 62444289 . A C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,17,0
- chr9 62501238 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,20,0
- chr9 62501354 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr9 62518913 . T A 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:4,9:0.69231:deepvariant:6,0,3
- chr9 62519517 . T A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:14:5,9:0.64286:deepvariant:1,3,0
- chr9 62520427 . A C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:0,6:0.85714:small_model:11,14,0
- chr9 62520492 . G C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:2,5:0.71429:deepvariant:4,9,0
- chr9 62520550 . A G 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:7:0,7:1.00000:small_model:22,24,0
- chr9 62520642 . G A 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:18,20,0
- chr9 62520751 . A G 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:14,19,0
- chr9 62560312 . C G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:1,18,0
- chr9 62596474 . C G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:2,8:0.80000:deepvariant:3,11,0
- chr9 62596610 . A G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:2,8:0.80000:deepvariant:9,0,0
- chr9 62597795 . T A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,30,0
- chr9 62598094 . T C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,26,0
- chr9 62598139 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,24,0
- chr9 62598186 . C G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,24,0
- chr9 62602880 . C G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,29,0
- chr9 62618673 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,22,0
- chr9 62618850 . T G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,20,0
- chr9 62619211 . T G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,20,0
- chr9 62709838 . A T 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,18,0
- chr9 62714809 . A T 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,19,0
- chr9 62715267 . G A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,24,0
- chr9 62797630 . G A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,15,0
- chr9 62798680 . G A 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,14,0
- chr9 62823170 . A C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,23,0
- chr9 62823174 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr9 62823313 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr9 62823319 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,20,0
- chr9 62823321 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr9 62823466 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr9 62823790 . A T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,31,0
- chr9 62823909 . A G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,16,0
- chr9 62823952 . C T 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,19,0
- chr9 62824257 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,21,0
- chr9 62824285 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,17,0
- chr9 62824357 . A C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,20,0
- chr9 62824608 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,20,0
- chr9 62824888 . C T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,19,0
- chr9 62824894 . T G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,26,0
- chr9 62824900 . G C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,28,0
- chr9 62824955 . G C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,39,0
- chr9 62896605 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,8,0
- chr9 62911451 . A T 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,24,0
- chr9 62911462 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,3:0.75000:deepvariant:5,16,0
- chr9 62911869 . A G 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:15,19,0
- chr9 62912093 . C A 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:15,17,0
- chr9 62912869 . T C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,26,0
- chr9 62971025 . A T 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:9:1,7:0.77778:small_model:16,24,0
- chr9 63119509 . G C 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,26,0
- chr9 63119889 . G C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,26,0
- chr9 63432206 . C T 27.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:28:3:0,3:1.00000:small_model:27,44,0
- chr9 63432289 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:1,23,0
- chr9 63445790 . A T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,21,0
- chr9 63446225 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,15,0
- chr9 63458378 . T A 26.9 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:5:7:0,4:0.57143:deepvariant:25,45,3
- chr9 63465522 . T A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:12,26,0
- chr9 63465530 . C G 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:4:0,4:1.00000:small_model:21,35,0
- chr9 63479376 . A C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,25,0
- chr9 63488846 . A C 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:17,32,0
- chr9 63497787 . G C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:13,28,0
- chr9 63537434 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,5:0.83333:deepvariant:2,15,0
- chr9 63537444 . A G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,5:0.83333:small_model:9,18,0
- chr9 63537619 . A G 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:24,22,0
- chr9 63537659 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,5:0.71429:deepvariant:2,17,0
- chr9 63537880 . G A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:4,13,0
- chr9 63537919 . A T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:4,8,0
- chr9 63537993 . T G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:9:0,6:0.66667:deepvariant:11,15,0
- chr9 63558443 . C T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,24,0
- chr9 63561478 . G A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:8:0,8:1.00000:small_model:13,27,0
- chr9 63561588 . G C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:8:0,8:1.00000:small_model:17,20,0
- chr9 63561594 . A T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:8:0,8:1.00000:small_model:15,24,0
- chr9 63574467 . A C 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:6:0,5:0.83333:small_model:19,21,0
- chr9 63574734 . G A 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:8:1,7:0.87500:small_model:13,25,0
- chr9 63576458 . A G 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:5:0,5:1.00000:small_model:24,34,0
- chr9 63576985 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,4:0.66667:deepvariant:0,12,0
- chr9 63578634 . G A 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:6:0,5:0.83333:small_model:22,27,0
- chr9 63582076 . G A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,6:0.85714:small_model:11,19,0
- chr9 63603411 . G A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,20,0
- chr9 63608108 . G C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:10,14,0
- chr9 63698203 . C G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:8,31,0
- chr9 63701171 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,23,0
- chr9 63701230 . A C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,20,0
- chr9 63701246 . A G 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:16,30,0
- chr9 63703183 . T C 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,2:0.50000:deepvariant:21,35,0
- chr9 63728678 . C T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,21,0
- chr9 63728689 . C A 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,23,0
- chr9 63728694 . G A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,24,0
- chr9 63729319 . G A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:17,12,0
- chr9 63730623 . C T 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:16,22,0
- chr9 63833164 . A G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:small_model:9,25,0
- chr9 63833169 . A G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,27,0
- chr9 63833178 . A C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,6:1.00000:small_model:8,23,0
- chr9 63842452 . G C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,31,0
- chr9 63843808 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,15,0
- chr9 63847452 . A T 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,5:1.00000:deepvariant:7,21,0
- chr9 63973240 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr9 63973248 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr9 63975885 . G C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,23,0
- chr9 64021694 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,12,0
- chr9 64060704 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,14,0
- chr9 64061177 . T G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr9 64062082 . A G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,25,0
- chr9 64062542 . G C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,15,0
- chr9 64087696 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,3:0.75000:small_model:10,17,0
- chr9 64087710 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,14,0
- chr9 64087713 . T A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:11,34,0
- chr9 64150042 . T C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,28,0
- chr9 64162955 . G A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:small_model:9,20,0
- chr9 64186006 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,17,0
- chr9 64190597 . A C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,5:0.83333:small_model:13,26,0
- chr9 64197760 . C G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,27,0
- chr9 64221911 . T G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,4:0.66667:deepvariant:2,14,0
- chr9 64227074 . A T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,4:0.80000:small_model:11,19,0
- chr9 64229437 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,22,0
- chr9 64232113 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,22,0
- chr9 64232128 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,21,0
- chr9 64233249 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,14,0
- chr9 64233563 . G T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,16,0
- chr9 64233958 . C A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,21,0
- chr9 64252517 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr9 64261121 . G A 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:18,25,0
- chr9 64262173 . T C 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:19,28,0
- chr9 64262337 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,18,0
- chr9 64279118 . C T 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:14,26,0
- chr9 64282785 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,18,0
- chr9 64287762 . A G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:1,6:0.85714:deepvariant:5,8,0
- chr9 64309507 . A G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:9:0,9:1.00000:deepvariant:14,24,0
- chr9 64317724 . C G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,29,0
- chr9 64317744 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,20,0
- chr9 64317787 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,21,0
- chr9 64399152 . A C 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,25,0
- chr9 64405272 . A T 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:13,24,0
- chr9 64405865 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,11,0
- chr9 64413643 . A G 21.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:21,27,0
- chr9 64452971 . G T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:8,11,0
- chr9 64453126 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,8,0
- chr9 64453141 . G A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,18,0
- chr9 64454529 . C A 26.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:5:0,5:1.00000:small_model:26,30,0
- chr9 64455116 . A C 21.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:21,25,0
- chr9 64511327 . T C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:0,7:1.00000:small_model:11,29,0
- chr9 64511332 . A T 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:7:0,7:1.00000:small_model:20,32,0
- chr9 64511673 . G C 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:6:0,6:1.00000:small_model:18,33,0
- chr9 64519026 . T C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,22,0
- chr9 64519035 . A G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,20,0
- chr9 64519394 . G A 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:13,26,0
- chr9 64519744 . T C 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:18,30,0
- chr9 64519793 . A G 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,5:1.00000:small_model:17,24,0
- chr9 64520037 . G A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:0,7:1.00000:small_model:17,37,0
- chr9 64520212 . G C 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:9:0,9:1.00000:small_model:23,39,0
- chr9 64520247 . A G 26.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:9:0,9:1.00000:small_model:26,21,0
- chr9 64520481 . G A 26.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:9:0,9:1.00000:small_model:26,21,0
- chr9 64520546 . A G 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:8:0,8:1.00000:small_model:25,22,0
- chr9 64520580 . C A 28.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:8:0,8:1.00000:small_model:28,26,0
- chr9 64520624 . C G 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:8:0,8:1.00000:small_model:21,21,0
- chr9 64520795 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:0,23,0
- chr9 64520857 . T A 26.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:6:0,6:1.00000:small_model:26,25,0
- chr9 64520946 . G C 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:19,25,0
- chr9 64542412 . T G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:deepvariant:15,22,0
- chr9 64546373 . C A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,18,0
- chr9 64547342 . C G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,15,0
- chr9 64547346 . C G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,16,0
- chr9 64603954 . G A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,18,0
- chr9 64603976 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,17,0
- chr9 64611394 . C T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:11,22,0
- chr9 64625666 . C G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,5:0.83333:small_model:12,21,0
- chr9 64636607 . G A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:small_model:9,27,0
- chr9 64637313 . T G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,25,0
- chr9 64638143 . T G 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:10:1,9:0.90000:small_model:17,30,0
- chr9 64734033 . A G 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:24,23,0
- chr9 64766290 . G T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,21,0
- chr9 64771612 . C G 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:17,31,0
- chr9 64772517 . T G 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:3,7:0.70000:deepvariant:5,3,0
- chr9 64772574 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:10:3,7:0.70000:deepvariant:3,0,0
- chr9 64772950 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:7,9:0.56250:deepvariant:1,0,4
- chr9 64819028 . G C 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,47,0
- chr9 64819045 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,37,0
- chr9 64845662 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,29,0
- chr9 64886568 . G T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,22,0
- chr9 64886610 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,4:0.66667:deepvariant:3,14,0
- chr9 64889277 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:9:0,7:0.77778:deepvariant:5,23,0
- chr9 64958162 . T G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,31,0
- chr9 64958225 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,36,0
- chr9 64961644 . G C 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:17,14,0
- chr9 64961748 . G T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,19,0
- chr9 64973570 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,19,0
- chr9 64973597 . T A 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:20,26,0
- chr9 64973625 . T A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:16,19,0
- chr9 64973634 . A G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,19,0
- chr9 64973672 . G C 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:17,25,0
- chr9 64992589 . A T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,18,0
- chr9 65014168 . A G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,15,0
- chr9 65035214 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:1,18,0
- chr9 65038015 . T G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,38,0
- chr9 65038028 . A T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,30,0
- chr9 65038099 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,34,0
- chr9 65038852 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,16,0
- chr9 65092384 . G C 27 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:8:0,8:1.00000:small_model:27,29,0
- chr9 65092496 . T G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:8:1,7:0.87500:small_model:8,25,0
- chr9 65092511 . A G 25.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:8:0,8:1.00000:small_model:25,30,0
- chr9 65093260 . C G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:8,20,0
- chr9 65093266 . C A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,19,0
- chr9 65093268 . T A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,21,0
- chr9 65103749 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr9 65206957 . A C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:8,31,0
- chr9 65213507 . T C 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,27,0
- chr9 65214063 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,21,0
- chr9 65214458 . C A 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,25,0
- chr9 65224262 . G A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:17,18,0
- chr9 65224321 . T C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,22,0
- chr9 65224327 . T A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,24,0
- chr9 65279488 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:4,15,0
- chr9 65315897 . G A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,38,0
- chr9 65316024 . A T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,42,0
- chr9 65318094 . C A 36.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:0,10:0.30000:deepvariant:34,33,0
- chr9 65331705 . A T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,26,0
- chr9 65333509 . C T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:1,4:0.80000:small_model:9,16,0
- chr9 65334564 . G C 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:20,26,0
- chr9 65363922 . A C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,21,0
- chr9 65408540 . G C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:2,6,0
- chr9 65446238 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:small_model:10,20,0
- chr9 65459154 . A T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,23,0
- chr9 65544227 . T A 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,41,0
- chr9 65546020 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,15,0
- chr9 65552806 . A G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr9 65554268 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,35,0
- chr9 65554697 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:10,22,0
- chr9 65554699 . T C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:10,22,0
- chr9 65617218 . C T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,18,0
- chr9 65625439 . C A 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:3:0,3:1.00000:small_model:21,37,0
- chr9 65625836 . T G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:17,9,0
- chr9 65637570 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,19,0
- chr9 65663456 . G C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,15,0
- chr9 65667110 . G C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,17,0
- chr9 65773561 . C A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,27,0
- chr9 65773581 . T C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,33,0
- chr9 65773605 . C A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,22,0
- chr9 65801757 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,10,0
- chr9 65855804 . T G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,20,0
- chr9 65855902 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,9,0
- chr9 65855926 . T G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,10,0
- chr9 65913670 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr9 65913685 . A G 30.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:30:2:0,2:1.00000:small_model:30,48,0
- chr9 66032962 . T A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,18,0
- chr9 66064569 . C G 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:3:0,3:1.00000:small_model:24,35,0
- chr9 66064724 . T G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,3:0.75000:deepvariant:5,20,0
- chr9 66103375 . G C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,22,0
- chr9 66104298 . A C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,42,0
- chr9 66167273 . G T 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,4:0.80000:small_model:13,16,0
- chr9 66167290 . C T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:2,4:0.66667:deepvariant:11,13,0
- chr9 66184969 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:12,4:0.25000:deepvariant:0,0,15
- chr9 66185756 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,6:0.33333:deepvariant:1,0,15
- chr9 66185873 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:12,7:0.36842:deepvariant:2,0,13
- chr9 66186592 . A T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:13,9:0.40909:deepvariant:1,0,13
- chr9 66186732 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:14,7:0.31818:deepvariant:2,0,18
- chr9 66232019 . A C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,18,0
- chr9 66344260 . A T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr9 66344780 . A T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,26,0
- chr9 66476729 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:12,21,0
- chr9 66549166 . A T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,46,0
- chr9 66549230 . T G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,37,0
- chr9 66549587 . A C 67.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:67:3:0,3:1.00000:small_model:71,90,0
- chr9 66549630 . A T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,44,0
- chr9 66549808 . A G 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:18,15,0
- chr9 66633678 . A G 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:18,15,0
- chr9 66633819 . A G 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,18,0
- chr9 66633846 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,24,0
- chr9 66633850 . C T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,20,0
- chr9 66634477 . T G 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:17,21,0
- chr9 66634810 . G T 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,20,0
- chr9 66636826 . A G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,25,0
- chr9 66678030 . A C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,20,0
- chr9 66679914 . C A 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,30,0
- chr9 66679994 . C A 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,23,0
- chr9 66680091 . G T 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,6:1.00000:small_model:14,25,0
- chr9 66680101 . G T 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:17,31,0
- chr9 66680193 . T G 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:20,33,0
- chr9 66680267 . T C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:2,4:0.66667:small_model:8,23,0
- chr9 66684686 . T C 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:6,22,0
- chr9 66736670 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:6:3,3:0.50000:deepvariant:0,0,0
- chr9 66739377 . A T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:15,28,0
- chr9 66739391 . G T 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,24,0
- chr9 66791044 . A C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,23,0
- chr9 66796785 . A T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,16,0
- chr9 66933600 . C G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:5,21,0
- chr9 66933819 . T G 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,30,0
- chr9 66933825 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,17,0
- chr9 66934030 . G A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:8,34,0
- chr9 66934377 . C T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,25,0
- chr9 66934382 . C T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,27,0
- chr9 66939536 . G A 27.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:6:0,6:1.00000:small_model:27,31,0
- chr9 66940043 . A G 26.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:8:0,8:1.00000:small_model:26,25,0
- chr9 66940597 . A G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,7:1.00000:small_model:10,40,0
- chr9 66960250 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,22,0
- chr9 66964616 . A C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,20,0
- chr9 67089734 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,18,0
- chr9 67109136 . C T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:5,20,0
- chr9 67155078 . C G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,21,0
- chr9 67200923 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:0,4:0.57143:deepvariant:1,12,0
- chr9 67201373 . T G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,5:0.83333:small_model:13,37,0
- chr9 67202143 . A T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,24,0
- chr9 67202165 . T C 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,27,0
- chr9 67202209 . T G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,14,0
- chr9 67202565 . T C 24.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:4:0,4:1.00000:small_model:24,31,0
- chr9 67202576 . T A 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:17,28,0
- chr9 67203045 . A G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,24,0
- chr9 67203677 . A T 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,38,0
- chr9 67221944 . A C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,27,0
- chr9 67223250 . T A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,20,0
- chr9 67223564 . A G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,33,0
- chr9 67224503 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,10,0
- chr9 67224535 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,14,0
- chr9 67354177 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,14,0
- chr9 67492876 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:1,12,0
- chr9 67494566 . A G 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,27,0
- chr9 67494656 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,2:0.50000:small_model:0,13,0
- chr9 67495623 . C T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:11,12,0
- chr9 67495652 . C G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:10,14,0
- chr9 67495855 . G C 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,21,0
- chr9 67495913 . A T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,13,0
- chr9 67496263 . A T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,16,0
- chr9 67529893 . C G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,41,0
- chr9 67530693 . C G 24.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:5:0,5:1.00000:small_model:24,36,0
- chr9 67570270 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,32,0
- chr9 67625049 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,28,0
- chr9 67625063 . A T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,38,0
- chr9 67627351 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,40,0
- chr9 67799426 . G A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr9 67855922 . C A 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:14,46,0
- chr9 67855939 . A C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,43,0
- chr9 68027110 . A G 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:21,27,0
- chr9 68187628 . G C 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,14,0
- chr9 68187868 . C G 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,14,0
- chr9 68188178 . C A 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,14,0
- chr9 68401319 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr9 68415396 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,27,0
- chr9 68501752 . A C 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:20,28,0
- chr9 68502345 . A C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,16,0
- chr9 68580213 . G T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr9 68580291 . G A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,33,0
- chr9 68580294 . G C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,21,0
- chr9 68580312 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,21,0
- chr9 68580955 . T A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr9 68581055 . C A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:deepvariant:11,22,0
- chr9 68581464 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,19,0
- chr9 68581749 . G A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,17,0
- chr9 68582047 . G A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,3:0.60000:deepvariant:1,3,0
- chr9 68582558 . T A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:2,1,0
- chr9 68582755 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:1,7:0.87500:deepvariant:2,13,0
- chr9 68582824 . T A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:8:1,7:0.87500:small_model:11,22,0
- chr9 68582866 . C A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:1,7:0.87500:small_model:10,19,0
- chr9 68583072 . T A 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:8:0,7:0.87500:small_model:21,23,0
- chr9 68583365 . C A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:1,6:0.75000:small_model:9,28,0
- chr9 68583587 . T A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:1,6:0.85714:small_model:11,24,0
- chr9 68583922 . G C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:0,7:1.00000:small_model:12,27,0
- chr9 68584339 . T C 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,6:1.00000:small_model:15,32,0
- chr9 68584354 . A C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,6:1.00000:small_model:14,30,0
- chr9 68584358 . A G 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:6:0,6:1.00000:small_model:17,40,0
- chr9 68584376 . C G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:10,22,0
- chr9 68584407 . C A 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:6:0,6:1.00000:small_model:23,29,0
- chr9 68584418 . A G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:12,29,0
- chr9 68584433 . C A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:10,30,0
- chr9 68584436 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:small_model:9,35,0
- chr9 68584439 . G T 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:19,49,0
- chr9 68584728 . G A 24.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:6:0,6:1.00000:small_model:24,24,0
- chr9 68584756 . C T 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:1,5:0.83333:small_model:12,24,0
- chr9 68584766 . C G 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:19,26,0
- chr9 68584793 . T A 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:19,27,0
- chr9 68584811 . C G 20.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:20,30,0
- chr9 68584867 . T C 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:6:0,6:1.00000:small_model:25,24,0
- chr9 68585611 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:2,6,0
- chr9 68768310 . A C 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:21,26,0
- chr9 68768340 . A C 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:4:0,4:1.00000:small_model:22,30,0
- chr9 68768810 . A C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,35,0
- chr9 68768851 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,5:0.71429:deepvariant:0,19,0
- chr9 68768954 . G C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:0,7:1.00000:small_model:17,35,0
- chr9 68769506 . G A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:9:0,7:0.77778:deepvariant:12,19,0
- chr9 68769560 . C A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:10:2,8:0.80000:deepvariant:12,18,0
- chr9 68968040 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,30,0
- chr9 68977634 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,26,0
- chr9 69014729 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,9,0
- chr9 69015145 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,11,0
- chr9 69015155 . A T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,10,0
- chr9 69015456 . A T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,38,0
- chr9 69081701 . G T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:4,7,0
- chr9 69175301 . A T 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,2:0.50000:deepvariant:21,20,2
- chr9 69208439 . A C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,4:0.66667:deepvariant:4,15,0
- chr9 69208871 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:2,19,0
- chr9 69223776 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,11,0
- chr9 69223993 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,17,0
- chr9 69269140 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,29,0
- chr9 69386653 . A C 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,39,0
- chr9 69507798 . C T 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,3:0.75000:small_model:16,17,0
- chr9 69607799 . T G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,17,0
- chr9 69608645 . T G 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:16,19,0
- chr9 69679786 . G C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,24,0
- chr9 69679833 . T A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,23,0
- chr9 69680464 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,25,0
- chr9 69680527 . A T 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,23,0
- chr9 69757404 . G A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,28,0
- chr9 69807463 . A T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,25,0
- chr9 69807501 . T A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr9 69807976 . C T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,18,0
- chr9 69878503 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,22,0
- chr9 69878537 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,39,0
- chr9 69879052 . T A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr9 69879336 . C G 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,21,0
- chr9 70041879 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,19,0
- chr9 70113225 . C A 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:22,27,0
- chr9 70120633 . G T 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:9,10,0
- chr9 70121861 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,30,0
- chr9 70156471 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,12,0
- chr9 70156480 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,8,0
- chr9 70157982 . T C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,34,0
- chr9 70268268 . A G 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,24,0
- chr9 70269654 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,22,0
- chr9 70409113 . T C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,22,0
- chr9 70445549 . C T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,29,0
- chr9 70454321 . T C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,30,0
- chr9 70553717 . G A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,24,0
- chr9 70596656 . T C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr9 70596838 . T C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr9 70597004 . T A 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr9 70597258 . T G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,18,0
- chr9 70597566 . T G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,20,0
- chr9 70935780 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,14,0
- chr9 70935850 . A C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,20,0
- chr9 70936485 . T A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:4,11,0
- chr9 70936520 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,11,0
- chr9 71107875 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,4:0.80000:deepvariant:5,13,0
- chr9 71108053 . T A 25 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:5:0,5:1.00000:small_model:25,29,0
- chr9 71155429 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr9 71155433 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,22,0
- chr9 71155434 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,21,0
- chr9 71155439 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,31,0
- chr9 71155484 . G A 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,20,0
- chr9 71316938 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,14,0
- chr9 71317191 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr9 71420701 . C T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,2:0.66667:deepvariant:6,16,0
- chr9 71433011 . T G 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:20,24,0
- chr9 71433103 . A T 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:8,18,0
- chr9 71433152 . T A 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,28,0
- chr9 71433176 . C G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,32,0
- chr9 71433870 . G C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,20,0
- chr9 71442313 . A T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:5,6:0.54545:deepvariant:7,0,10
- chr9 71460549 . T A 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:20,37,0
- chr9 71460800 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,14,0
- chr9 71468651 . G C 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,43,0
- chr9 71474436 . C G 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,30,0
- chr9 71474506 . C G 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:2:0,2:1.00000:small_model:22,53,0
- chr9 71836522 . T C 25.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:6:0,6:1.00000:small_model:25,24,0
- chr9 71837248 . T A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:8:1,7:0.87500:small_model:15,24,0
- chr9 71841759 . A C 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:19,23,0
- chr9 71875627 . T C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,15,0
- chr9 71916720 . A C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,19,0
- chr9 71942749 . A T 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:14,26,0
- chr9 71944330 . C G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:2,6,0
- chr9 72055612 . C G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,24,0
- chr9 72055630 . T G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,20,0
- chr9 72109257 . C G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,23,0
- chr9 72109263 . G C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,22,0
- chr9 72109282 . C A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,19,0
- chr9 72202186 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:0,0,11
- chr9 72219196 . G A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,19,0
- chr9 72231274 . G A 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,23,0
- chr9 72245168 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,19,0
- chr9 72245205 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr9 72250707 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,24,0
- chr9 72286263 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:11:2,9:0.81818:deepvariant:6,11,0
- chr9 72291624 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,19,0
- chr9 72291998 . A C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,18,0
- chr9 72307192 . C T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,3:0.75000:small_model:11,22,0
- chr9 72307322 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:6,9:0.60000:deepvariant:0,10,0
- chr9 72338211 . A C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:5,3:0.37500:deepvariant:3,0,13
- chr9 72447910 . C A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:16,3:0.15789:deepvariant:0,0,16
- chr9 72485323 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:10,5:0.33333:deepvariant:1,0,12
- chr9 72487805 . A C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,25,0
- chr9 72487883 . A T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,29,0
- chr9 72602328 . T G 24.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:12:0,12:1.00000:small_model:24,23,0
- chr9 72605119 . A G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,27,0
- chr9 72641221 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,19,0
- chr9 72696556 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:10:0,7:0.70000:deepvariant:2,18,0
- chr9 72697342 . A C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:10,9:0.47368:deepvariant:1,0,7
- chr9 72760373 . G T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,21,0
- chr9 72791197 . G T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:4,14,0
- chr9 72791202 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:4,14,0
- chr9 72791247 . A G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:2,4:0.66667:deepvariant:6,9,0
- chr9 72795916 . G A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:16,23,0
- chr9 72796849 . G A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,27,0
- chr9 72809563 . T C 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:3:0,3:1.00000:small_model:22,31,0
- chr9 72810867 . T C 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:8:1,6:0.75000:deepvariant:7,14,0
- chr9 72812069 . G C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:small_model:9,19,0
- chr9 72826694 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:1,0,13
- chr9 72870775 . A T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:2,11:0.84615:deepvariant:6,0,1
- chr9 73223584 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:8,5:0.38462:deepvariant:1,0,9
- chr9 73290318 . A G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,23,0
- chr9 73317173 . G A 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:7:0,7:1.00000:small_model:23,29,0
- chr9 73317190 . G T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:1,5:0.71429:deepvariant:11,21,0
- chr9 73317216 . G T 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:9:1,8:0.88889:small_model:17,26,0
- chr9 73317245 . T C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:8:0,6:0.75000:small_model:14,13,0
- chr9 73318557 . A C 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:9:0,8:0.88889:small_model:10,30,0
- chr9 73319531 . T A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:19:9,10:0.52632:deepvariant:8,0,15
- chr9 73354863 . T G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr9 73354938 . C G 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,17,0
- chr9 73355037 . T C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,23,0
- chr9 73374757 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr9 73374777 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,20,0
- chr9 73375501 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,22,0
- chr9 73375503 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,3:0.75000:deepvariant:3,20,0
- chr9 73375673 . T C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,3:0.60000:deepvariant:10,19,0
- chr9 73469850 . T G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,19,0
- chr9 73551633 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:8,7:0.46667:deepvariant:3,0,12
- chr9 73650769 . T G 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:14,6:0.26087:deepvariant:0,0,19
- chr9 73703541 . G C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,18,0
- chr9 73728593 . A C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:4,21,0
- chr9 73794843 . T A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,30,0
- chr9 73882987 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,16,0
- chr9 73884530 . A C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,27,0
- chr9 73884631 . A G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:17,29,0
- chr9 73886113 . C T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:7,20,0
- chr9 73886262 . G C 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:4:0,4:1.00000:small_model:23,30,0
- chr9 73963248 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:2,16,0
- chr9 73976696 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,18,0
- chr9 73979581 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,14,0
- chr9 73980906 . T G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr9 73981140 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:5,8,0
- chr9 73981202 . C A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,19,0
- chr9 74016920 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,16,0
- chr9 74020017 . C T 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,18,0
- chr9 74020049 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,25,0
- chr9 74020057 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,22,0
- chr9 74020274 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,36,0
- chr9 74023301 . A C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:5,18,0
- chr9 74062996 . T G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,3:0.75000:small_model:11,21,0
- chr9 74063879 . T C 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,29,0
- chr9 74083041 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,40,0
- chr9 74083370 . G T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,17,0
- chr9 74083378 . T C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,17,0
- chr9 74083385 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr9 74083604 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,32,0
- chr9 74083704 . G A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr9 74083774 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:11,12,0
- chr9 74083897 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr9 74083898 . C T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,30,0
- chr9 74084074 . C T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,20,0
- chr9 74084086 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr9 74084234 . G C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,17,0
- chr9 74084293 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr9 74084309 . G T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr9 74095095 . T A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:9,7,0
- chr9 74098741 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,5:0.27778:deepvariant:1,0,17
- chr9 74148370 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,17
- chr9 74148662 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:10,5:0.33333:deepvariant:0,0,15
- chr9 74148993 . T G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:10,5:0.33333:deepvariant:0,0,16
- chr9 74149064 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:9,6:0.40000:deepvariant:0,0,7
- chr9 74180660 . C A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:3,4:0.36364:deepvariant:1,6,0
- chr9 74180765 . A C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:10:6,4:0.40000:small_model:10,0,18
- chr9 74180902 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:5,5:0.50000:deepvariant:2,10,0
- chr9 74180915 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:6,4:0.40000:deepvariant:1,12,0
- chr9 74181257 . C G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:6,6:0.50000:small_model:11,0,14
- chr9 74181322 . G C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:12:6,6:0.50000:small_model:17,0,18
- chr9 74181411 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,5:0.41667:deepvariant:1,0,7
- chr9 74181413 . G A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:6,6:0.50000:deepvariant:4,0,9
- chr9 74181455 . G C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:12:6,6:0.50000:small_model:11,0,15
- chr9 74269732 . C G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:11,16,0
- chr9 74281438 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:1,15,0
- chr9 74330804 . G C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr9 74330805 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr9 74330821 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr9 74524376 . C T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:10,7:0.41177:deepvariant:3,0,5
- chr9 74539247 . A C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:14,6:0.30000:deepvariant:3,0,16
- chr9 74724407 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:12,4:0.25000:deepvariant:0,0,18
- chr9 74731254 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:14,6:0.30000:deepvariant:0,0,11
- chr9 74784041 . A G 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:14:4,10:0.71429:deepvariant:10,14,0
- chr9 74787318 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:1,0,13
- chr9 74807422 . C G 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:18,21,0
- chr9 74807536 . C T 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,25,0
- chr9 74807667 . C G 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:21,24,0
- chr9 74830380 . T G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,27,0
- chr9 74830381 . G A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,21,0
- chr9 74845906 . T G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,16,0
- chr9 74845907 . G A 24.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:2:0,2:1.00000:small_model:24,23,0
- chr9 74845964 . T A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr9 74846021 . T A 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr9 74846998 . C T 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,21,0
- chr9 74846999 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr9 74847320 . A C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:10,29,0
- chr9 74950721 . G C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr9 74950759 . T A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,18,0
- chr9 74950785 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr9 74950813 . A T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,16,0
- chr9 74951862 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr9 74951962 . T A 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr9 74954786 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,22,0
- chr9 74991932 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:21,5:0.19231:deepvariant:1,0,23
- chr9 74991987 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:27:20,7:0.25926:deepvariant:2,0,23
- chr9 75002682 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:17,4:0.19048:deepvariant:0,0,16
- chr9 75012825 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,4:0.44444:deepvariant:0,0,4
- chr9 75013786 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:6,5:0.45454:deepvariant:0,12,0
- chr9 75099915 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:9,4:0.30769:deepvariant:1,0,18
- chr9 75099974 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:10,3:0.23077:deepvariant:0,0,18
- chr9 75100069 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,4:0.30769:deepvariant:0,0,16
- chr9 75100227 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,3:0.23077:deepvariant:1,0,18
- chr9 75110480 . G A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:small_model:10,23,0
- chr9 75112625 . T A 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:22,21,0
- chr9 75120841 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:9,3:0.25000:deepvariant:0,0,12
- chr9 75122840 . C T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:5,19,0
- chr9 75123521 . G C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:7,4:0.36364:deepvariant:3,0,11
- chr9 75283039 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:10,7:0.41177:deepvariant:2,0,13
- chr9 75283317 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:5,11:0.68750:deepvariant:1,0,3
- chr9 75284113 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:7,11:0.52381:deepvariant:0,0,9
- chr9 75288661 . A G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:21:6,15:0.71429:deepvariant:14,5,0
- chr9 75289802 . G T 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:20:8,12:0.60000:deepvariant:11,5,0
- chr9 75311437 . T G 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:3:0,3:1.00000:small_model:22,28,0
- chr9 75311650 . C G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:4,20,0
- chr9 75312181 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,16,0
- chr9 75312328 . G A 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:7,13,0
- chr9 75319146 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,18,0
- chr9 75337958 . A T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:2:0,2:1.00000:small_model:0,20,4
- chr9 75456896 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,11
- chr9 75555147 . G T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:17,4:0.19048:deepvariant:0,0,19
- chr9 75555302 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:15,4:0.21053:deepvariant:0,0,19
- chr9 75555323 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:14,5:0.26316:deepvariant:3,0,18
- chr9 75555643 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:16,4:0.20000:deepvariant:1,0,17
- chr9 75556014 . A T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:13,6:0.31579:deepvariant:5,0,15
- chr9 75556213 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:13,4:0.23529:deepvariant:1,0,15
- chr9 75575256 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:31:23,8:0.25806:deepvariant:1,0,12
- chr9 75575607 . G T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:32:25,7:0.21875:deepvariant:2,0,21
- chr9 75576316 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:19,3:0.13636:deepvariant:0,0,21
- chr9 75579653 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:13,9:0.40909:deepvariant:1,0,18
- chr9 75581241 . T G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,5:0.27778:deepvariant:0,0,19
- chr9 75613461 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:12,5:0.29412:deepvariant:2,0,21
- chr9 75613537 . T A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:17:12,5:0.29412:deepvariant:4,0,22
- chr9 75613900 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:10,5:0.33333:deepvariant:1,0,12
- chr9 75614515 . T A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:13,4:0.23529:deepvariant:2,0,20
- chr9 75615052 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:11,3:0.20000:deepvariant:0,0,16
- chr9 75615434 . T G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:15,3:0.16667:deepvariant:1,0,20
- chr9 75756175 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,20,0
- chr9 75797989 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:13,7:0.35000:deepvariant:2,0,24
- chr9 75803752 . C A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:15,5:0.25000:deepvariant:1,0,19
- chr9 75804443 . C T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:14,7:0.33333:deepvariant:4,0,20
- chr9 75804457 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:14,7:0.33333:deepvariant:1,0,21
- chr9 75804512 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:14,7:0.33333:deepvariant:2,0,22
- chr9 75804557 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:14,7:0.33333:deepvariant:0,0,20
- chr9 75804588 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:14,7:0.33333:deepvariant:1,0,22
- chr9 75804619 . T G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:13,8:0.38095:deepvariant:4,0,21
- chr9 75804719 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:14,7:0.33333:deepvariant:0,0,14
- chr9 75804740 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:12,7:0.35000:deepvariant:5,0,18
- chr9 75804759 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:13,7:0.35000:deepvariant:3,0,16
- chr9 75804860 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:11,7:0.38889:deepvariant:3,0,20
- chr9 75805069 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:12,7:0.36842:deepvariant:1,0,13
- chr9 75805077 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:12,7:0.36842:deepvariant:1,0,12
- chr9 75805084 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:11,7:0.35000:deepvariant:0,0,13
- chr9 75805094 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:12,8:0.40000:deepvariant:1,0,13
- chr9 75805284 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:12,10:0.45454:deepvariant:1,0,20
- chr9 75805482 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:15,5:0.25000:deepvariant:2,0,15
- chr9 75805552 . G C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:12,7:0.33333:deepvariant:1,0,19
- chr9 75805557 . T G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:12,8:0.40000:deepvariant:3,0,20
- chr9 75805615 . A C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:21:13,8:0.38095:deepvariant:6,0,22
- chr9 75805772 . C A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:22:15,7:0.31818:deepvariant:4,0,19
- chr9 75805773 . G T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:22:15,7:0.31818:deepvariant:4,0,19
- chr9 75805780 . T G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:23:15,8:0.34783:deepvariant:5,0,19
- chr9 75806049 . A C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:15,8:0.34783:deepvariant:4,0,20
- chr9 75806068 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:14,8:0.36364:deepvariant:2,0,19
- chr9 75806179 . A G 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:24:14,10:0.41667:deepvariant:7,0,18
- chr9 75806242 . G A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:24:16,8:0.33333:deepvariant:5,0,19
- chr9 75806433 . G A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:16,8:0.33333:deepvariant:0,0,16
- chr9 75806434 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:16,8:0.33333:deepvariant:0,0,18
- chr9 75806452 . A T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:24:14,9:0.37500:deepvariant:3,0,17
- chr9 75806541 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:25:17,8:0.32000:deepvariant:1,0,20
- chr9 75806721 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:16,7:0.30435:deepvariant:0,0,17
- chr9 75806793 . A G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:14,9:0.39130:deepvariant:5,0,19
- chr9 75806918 . T G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:14,8:0.36364:deepvariant:1,0,17
- chr9 75807048 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:12,8:0.40000:deepvariant:4,0,16
- chr9 75807108 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:13,8:0.38095:deepvariant:1,0,15
- chr9 75807318 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:15,6:0.28571:deepvariant:0,0,20
- chr9 75807417 . T C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:12,7:0.36842:deepvariant:5,0,12
- chr9 75807703 . G T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:13,5:0.27778:deepvariant:1,0,14
- chr9 75807916 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,4:0.22222:deepvariant:1,0,17
- chr9 75823611 . T G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:4,6:0.60000:deepvariant:5,0,7
- chr9 75823622 . T A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:5,5:0.50000:deepvariant:3,0,10
- chr9 75823691 . A T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:4,5:0.55556:deepvariant:4,0,6
- chr9 75823936 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:2,0,5
- chr9 75823981 . G C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:6,5:0.45454:deepvariant:7,0,9
- chr9 75835463 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:34:19,14:0.41177:deepvariant:8,0,0
- chr9 75915488 . G A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:6,6:0.50000:deepvariant:7,0,10
- chr9 75930379 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:14,10:0.41667:deepvariant:2,0,10
- chr9 75930687 . A C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:13,10:0.43478:deepvariant:4,0,18
- chr9 75930817 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:16,8:0.33333:deepvariant:1,0,18
- chr9 75931092 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:13,11:0.45833:deepvariant:0,0,12
- chr9 75931390 . C T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:22:12,10:0.45454:deepvariant:7,0,18
- chr9 75932619 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:23:18,5:0.21739:deepvariant:1,0,20
- chr9 75932770 . G T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:17,5:0.22727:deepvariant:0,0,17
- chr9 75933040 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,6:1.00000:small_model:8,29,0
- chr9 75960822 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:11,5:0.31250:deepvariant:4,0,10
- chr9 75961098 . G C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:12,5:0.29412:deepvariant:3,0,19
- chr9 75963298 . A C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:16:8,7:0.43750:deepvariant:7,0,15
- chr9 75963312 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:10,7:0.41177:deepvariant:1,0,15
- chr9 76022413 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,6,0
- chr9 76022562 . G A 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:8,12,0
- chr9 76025134 . A C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,18,0
- chr9 76038831 . G C 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,20,0
- chr9 76040091 . T G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,19,0
- chr9 76111018 . C G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:10,5:0.33333:deepvariant:4,0,18
- chr9 76162008 . T G 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:13:3,10:0.76923:small_model:16,27,0
- chr9 76231344 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,18,0
- chr9 76349854 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:13,9:0.40909:deepvariant:1,0,19
- chr9 76355540 . A T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:13:7:0,7:1.00000:small_model:0,24,5
- chr9 76356379 . A T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:40:29,11:0.27500:deepvariant:2,0,18
- chr9 76356528 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:38:29,9:0.23684:deepvariant:2,0,15
- chr9 76356632 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:39:29,10:0.25641:deepvariant:0,0,14
- chr9 76370830 . G A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,18,0
- chr9 77321714 . G C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:17:11,6:0.35294:small_model:10,0,23
- chr9 77321796 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:19:12,7:0.36842:small_model:12,0,23
- chr9 77974471 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:24:16,8:0.33333:deepvariant:3,0,24
- chr9 77975331 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:15,7:0.31818:deepvariant:0,0,23
- chr9 77976263 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:12,7:0.36842:deepvariant:3,0,23
- chr9 77976385 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:12,7:0.36842:deepvariant:3,0,23
- chr9 77976675 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:12,7:0.36842:deepvariant:2,0,24
- chr9 77976750 . T A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:12,6:0.33333:deepvariant:2,0,24
- chr9 77977178 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:12,5:0.29412:deepvariant:0,0,25
- chr9 83481844 . T G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:29:22,6:0.20690:small_model:13,0,40
- chr9 83481905 . T A 30.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:31:25:17,8:0.32000:small_model:30,0,52
- chr9 87494419 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,17,0
- chr9 90840129 . T C 28.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:28:39:3,36:0.92308:small_model:28,61,0
- chr9 99972495 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,6,0
- chr9 106481121 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:6,2:0.25000:deepvariant:3,0,16
- chr9 106481749 . A C 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:7:5,2:0.28571:small_model:22,0,46
- chr9 111241682 . T G 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:12:7,5:0.41667:small_model:20,0,36
- chr9 113669122 . G A 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,19,0
- chr9 113669157 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,4:0.80000:deepvariant:3,17,0
- chr9 113669738 . C T 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,23,0
- chr9 116323947 . A G 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:5:2,3:0.60000:small_model:22,0,34
- chr9 116323948 . C T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:5:3,2:0.40000:deepvariant:11,0,27
- chr9 116323961 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:5:3,2:0.40000:deepvariant:8,0,20
- chr9 116324083 . A G 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:6:4,2:0.33333:small_model:11,0,32
- chr9 116324152 . C T 4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:7:4,3:0.42857:1,12,0
- chr9 119280570 . C A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:12:6,6:0.50000:small_model:17,0,25
- chr9 122861852 . G A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:12:10,2:0.16667:small_model:8,0,35
- chr9 143164488 . G C 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:20:1,3:0.15000:deepvariant:13,20,10
- chr9 143567554 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:0,4:1.00000:deepvariant:0,2,0
- chr9 143567561 . G C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:14,14,0
- chr9 143567572 . A G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:11,12,0
- chr9 143567600 . A G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:deepvariant:14,16,0
- chr9 143567607 . G A 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,22,0
- chr9 143567611 . G C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:1,3:0.75000:deepvariant:10,14,0
- chr9 143567628 . C T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:deepvariant:11,21,0
- chr9 143567629 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:12,20,0
- chr9 143567631 . C T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:deepvariant:11,21,0
- chr9 143567632 . A G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,22,0
- chr9 143567635 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:deepvariant:11,20,0
- chr9 143567650 . A G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:12,19,0
- chr9 143567652 . T C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:8,20,0
- chr9 143567661 . A G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:12,20,0
- chr9 143567668 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:5,19,0
- chr9 147954015 . G C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:4,3:0.42857:deepvariant:3,0,20
- chr9 148766733 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:5:3,2:0.40000:deepvariant:0,0,2
- chr9 148766739 . G T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:5:3,2:0.40000:deepvariant:5,0,8
- chr9 148767380 . G T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:5,5:0.50000:small_model:14,0,21
- chr9 148767456 . A T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:2,6,0
- chr9 148767540 . G T 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:10:4,6:0.60000:small_model:18,0,26
- chr9 149036770 . T C 31.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:31,14,0
- chr9 149285470 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:17,4:0.19048:deepvariant:0,0,20
- chr9 149285509 . T C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:23:14,7:0.30435:small_model:14,0,39
- chr9 149285513 . C T 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:23:19,4:0.17391:deepvariant:9,0,30
- chr9 149285761 . C T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:26:18,7:0.26923:small_model:10,0,34
- chr9 149285830 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:24:18,6:0.25000:deepvariant:4,0,16
- chr9 149285973 . G A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:23:16,7:0.30435:small_model:12,0,38
- chr9 149286013 . T C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:23:16,7:0.30435:small_model:10,0,34
- chr9 149339187 . C G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:15:11,3:0.20000:small_model:13,0,36
- chr9 149363906 . T A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:10,3:0.23077:deepvariant:3,0,27
- chr9 149363908 . T A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:10,4:0.28571:deepvariant:9,0,28
- chr9 149570048 . T C 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:12:10,2:0.16667:small_model:19,0,43
- chr9 149573786 . T A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:12:10,2:0.16667:small_model:13,0,47
- chr9 149573983 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:13:11,2:0.15385:small_model:11,0,36
- chr9 149574034 . G T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:10,2:0.16667:small_model:9,0,36
- chr9 149574076 . T C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:10,2:0.16667:small_model:14,0,42
- chr9 149576726 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:11,3:0.15789:deepvariant:4,3,41
- chr9 149606538 . C T 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:13:0,4:0.30769:deepvariant:18,16,5
- chr9 149753089 . C G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:11:7,4:0.36364:small_model:9,0,17
- chr9 149753242 . A C 47.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:11:0,11:0.45454:deepvariant:47,44,15
- chr9 149971491 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:11,5:0.27778:deepvariant:0,0,11
- chr9 149976768 . A G 37.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:4:18:6,4:0.22222:deepvariant:34,2,51
- chr9 149978560 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:14,2:0.12500:deepvariant:0,0,37
- chr9 150038199 . A G 22.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:6:2,4:0.66667:small_model:22,0,18
- chr9 150038246 . C G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:4:2,2:0.50000:small_model:11,0,12
- chr9 150102461 . C T 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:21,15,0
- chr9 150102523 . C T 26.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:26,16,0
- chr9 150102552 . G C 26.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:26,17,0
- chr9 150102585 . C T 26.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:26,16,0
- chr9 150102614 . G C 25.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:25,17,0
- chr9 150102647 . C T 26 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:25,15,0
- chr9 150104846 . C G 24.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:4:2,2:0.50000:small_model:24,0,35
- chr9 150107760 . C G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:4:1,3:0.75000:small_model:17,0,19
- chr9 150107822 . C G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:4:2,2:0.50000:small_model:14,0,24
- chr9 150107946 . C G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:4:1,3:0.75000:small_model:17,0,19
- chr9 150108008 . C G 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:4:1,3:0.75000:small_model:16,0,10
- chr9 150108070 . C G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:4:2,2:0.50000:small_model:14,0,24
- chr9 150111294 . G C 41.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:5:0,5:1.00000:small_model:41,21,0
- chr10 258043 . C T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:4:2,2:0.50000:small_model:15,0,22
- chr10 316908 . A G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:6,3:0.33333:small_model:12,0,36
- chr10 410689 . A G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:6:4,2:0.33333:small_model:17,0,38
- chr10 714999 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:17,3:0.15000:deepvariant:1,0,27
- chr10 1233251 . G C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:3,4:0.57143:deepvariant:2,0,2
- chr10 1238129 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:12,5:0.29412:deepvariant:2,0,5
- chr10 1464011 . A G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:9:7,2:0.22222:small_model:17,0,45
- chr10 1464087 . T C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:9:7,2:0.22222:small_model:10,0,32
- chr10 1464096 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:7,2:0.22222:small_model:11,0,32
- chr10 1464128 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:10:7,3:0.30000:small_model:9,0,44
- chr10 1464154 . A G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:9:7,2:0.22222:deepvariant:6,0,27
- chr10 1464160 . T C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:7,2:0.22222:deepvariant:4,0,28
- chr10 1464161 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:7,2:0.22222:deepvariant:2,0,27
- chr10 1464165 . C T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:7,2:0.22222:deepvariant:5,0,29
- chr10 1464209 . A G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:7,2:0.22222:small_model:12,0,30
- chr10 1464226 . C T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:10:7,3:0.30000:small_model:15,0,35
- chr10 1572850 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:8,2:0.20000:deepvariant:2,0,24
- chr10 1572871 . C T 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:11:8,3:0.27273:small_model:14,0,39
- chr10 1615826 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,4,0
- chr10 1615875 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:3:1,2:0.66667:deepvariant:0,4,0
- chr10 1615954 . A G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:3:1,2:0.66667:small_model:17,0,23
- chr10 1615967 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:3:1,2:0.66667:small_model:10,0,16
- chr10 3413733 . A G 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:8,2:0.20000:small_model:13,0,34
- chr10 5372625 . G A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr10 5373181 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:2,13,0
- chr10 5373280 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:2,3:0.60000:deepvariant:4,10,0
- chr10 7594364 . C A 31.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:31:10:6,4:0.40000:small_model:31,0,59
- chr10 8362402 . T A 34.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:11:18:5,2:0.11111:deepvariant:34,21,41
- chr10 11295996 . A G 27.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:28:10:7,3:0.30000:small_model:27,0,64
- chr10 11296059 . A G 27 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:27:10:7,3:0.30000:small_model:27,0,99
- chr10 11296396 . C T 31.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:31:14:9,5:0.35714:small_model:31,0,99
- chr10 11380820 . C T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,17,0
- chr10 11380832 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,18,0
- chr10 11380844 . T C 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,24,0
- chr10 11380869 . C T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,20,0
- chr10 11380870 . A G 28.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:3:0,3:1.00000:small_model:28,21,0
- chr10 11380880 . A C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,17,0
- chr10 11380889 . G A 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,18,0
- chr10 11380895 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,17,0
- chr10 11380932 . T C 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:20,10,0
- chr10 11380933 . C T 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:17,14,0
- chr10 11380994 . C A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:12,15,0
- chr10 18518912 . T G 25.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,3:0.75000:small_model:19,11,0
- chr10 19334860 . C A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:10,2:0.16667:small_model:13,0,37
- chr10 28680316 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:10,4:0.28571:deepvariant:1,0,20
- chr10 36950865 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,21,0
- chr10 36950870 . A C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:deepvariant:13,22,0
- chr10 36950877 . G C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:11,22,0
- chr10 36950906 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:10,18,0
- chr10 36950915 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:11,18,0
- chr10 36950940 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:10,21,0
- chr10 36950942 . G A 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,18,0
- chr10 36950956 . A T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:6,18,0
- chr10 36950969 . T C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,13,0
- chr10 36950971 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,14,0
- chr10 38578919 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:50:39,11:0.22000:0,13,0
- chr10 38579090 . T C 7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:49:40,9:0.18367:5,17,0
- chr10 38581593 . G A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/.:3:22:5,6:0.27273:deepvariant:13,11,15
- chr10 38622437 . G C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:33:25,8:0.24242:deepvariant:5,0,16
- chr10 38982245 . A G 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:10:8,2:0.20000:small_model:20,0,44
- chr10 39705984 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:8,6:0.42857:deepvariant:2,0,5
- chr10 39706378 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:8,7:0.46667:deepvariant:2,0,2
- chr10 39783779 . C T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:4,7:0.63636:deepvariant:3,2,0
- chr10 39784309 . G C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:2,5:0.71429:deepvariant:6,0,2
- chr10 40564982 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:2,3:0.60000:deepvariant:0,0,0
- chr10 40702642 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:7,5:0.38462:deepvariant:0,0,9
- chr10 40704264 . C G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:22:16,6:0.27273:deepvariant:5,0,15
- chr10 40765035 . G A 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:2,4:0.66667:deepvariant:6,14,0
- chr10 40765044 . G T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:2,4:0.66667:deepvariant:5,15,0
- chr10 40817323 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,14
- chr10 40841877 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,4:0.40000:deepvariant:0,0,13
- chr10 40912478 . G T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:9:1,8:0.88889:deepvariant:7,17,0
- chr10 40912493 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:4,7:0.63636:deepvariant:2,15,0
- chr10 40912719 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:10:3,7:0.70000:deepvariant:4,13,0
- chr10 40913136 . A C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:17:4,12:0.70588:deepvariant:10,13,0
- chr10 40913496 . T A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:18:5,13:0.72222:deepvariant:8,8,0
- chr10 40923517 . G T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:8,5:0.31250:small_model:3,0,8
- chr10 40983505 . G A 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,6:1.00000:small_model:18,17,0
- chr10 40983601 . T G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:9,21,0
- chr10 40983640 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,3:0.60000:deepvariant:4,18,0
- chr10 40983680 . G T 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:14,19,0
- chr10 40983702 . C T 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,2:0.50000:deepvariant:17,32,0
- chr10 40983702 . C G 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:3:4:0,2:0.50000:deepvariant:17,32,0
- chr10 40983797 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,3:0.75000:deepvariant:10,20,0
- chr10 40983803 . T A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,20,0
- chr10 41145211 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,13,0
- chr10 41145392 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,10,0
- chr10 41146655 . G T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,3:0.75000:deepvariant:6,19,0
- chr10 41146657 . A T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,26,0
- chr10 41146763 . C T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,22,0
- chr10 41146766 . C T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,22,0
- chr10 41146845 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,21,0
- chr10 41177757 . T G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:4,12,0
- chr10 41177827 . T G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:5,5,0
- chr10 41267731 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:2,12,0
- chr10 41286556 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:9:0,6:0.66667:deepvariant:10,21,0
- chr10 41311407 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,10
- chr10 41311465 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:1,0,11
- chr10 41311510 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,11
- chr10 41314025 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:8,3:0.25000:deepvariant:1,0,14
- chr10 41315072 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:0,0,15
- chr10 41315621 . A C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,16
- chr10 41316140 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:1,0,10
- chr10 41316545 . G C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:3,0,9
- chr10 41370060 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,4:0.57143:deepvariant:0,6,0
- chr10 41375894 . T G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:25:16,9:0.36000:deepvariant:1,0,8
- chr10 41667200 . A C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:9,5:0.35714:deepvariant:3,0,15
- chr10 41667299 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:9,4:0.30769:deepvariant:3,0,15
- chr10 41667353 . G T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:8,4:0.33333:deepvariant:5,0,14
- chr10 41669099 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr10 41669971 . G C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:deepvariant:9,18,0
- chr10 41671680 . C G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:7,2:0.22222:deepvariant:1,0,8
- chr10 41920985 . T A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:10:8,2:0.20000:small_model:11,0,33
- chr10 41922286 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:7,4:0.36364:small_model:10,0,23
- chr10 41922813 . C A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:5,7:0.53846:deepvariant:3,0,15
- chr10 41923014 . T G 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:14:7,7:0.50000:small_model:14,0,21
- chr10 41923051 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,18
- chr10 41923078 . T G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:8,6:0.42857:deepvariant:9,0,20
- chr10 41923087 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:9,6:0.40000:deepvariant:4,0,18
- chr10 41923147 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:10,3:0.23077:deepvariant:3,0,24
- chr10 42087568 . T G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:13,9,0
- chr10 42087763 . T G 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,14,0
- chr10 42087848 . C A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,19,0
- chr10 42087852 . T C 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:deepvariant:8,19,0
- chr10 42087863 . C G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,19,0
- chr10 42087906 . C A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,13,0
- chr10 42087941 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,18,0
- chr10 42087953 . C G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,19,0
- chr10 42087963 . G C 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:5,13,0
- chr10 42087975 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr10 42087998 . C G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,18,0
- chr10 42088011 . C A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:3,10,0
- chr10 42088018 . G A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,13,0
- chr10 42088057 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,17,0
- chr10 42088075 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:2,17,0
- chr10 42088077 . G C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:2,2:0.50000:deepvariant:1,16,0
- chr10 42088079 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:0,15,0
- chr10 42088121 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,2:0.50000:deepvariant:0,16,0
- chr10 42088142 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,21,0
- chr10 42088192 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:2,20,0
- chr10 42088246 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,18,0
- chr10 42088249 . G A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,20,0
- chr10 42088266 . G A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:4:2,2:0.50000:small_model:10,0,21
- chr10 42088276 . A C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,18,0
- chr10 42088280 . A C 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,2:0.66667:small_model:15,9,0
- chr10 42088304 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,2:0.50000:deepvariant:2,18,0
- chr10 42088325 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:0,17,0
- chr10 42128334 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:39:1,38:0.97436:small_model:9,21,0
- chr10 42299041 . C G 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:18:0,16:0.88889:small_model:6,18,0
- chr10 42403404 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr10 42403417 . G T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr10 42403491 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,20,0
- chr10 42404621 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr10 42404663 . G C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr10 42404669 . T C 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,34,0
- chr10 42404673 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,20,0
- chr10 42404681 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,25,0
- chr10 42404723 . T C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,20,0
- chr10 42404738 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,25,0
- chr10 42404748 . A C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,25,0
- chr10 42434887 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,20,0
- chr10 42612797 . G C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:12:3,9:0.75000:deepvariant:16,0,9
- chr10 42613281 . G C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:6,7:0.53846:deepvariant:11,0,9
- chr10 42643864 . A T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,3:0.23077:deepvariant:2,0,12
- chr10 42645532 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:15,2:0.11111:deepvariant:0,0,17
- chr10 42645961 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:14,3:0.17647:deepvariant:1,0,19
- chr10 42797043 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:0,6,0
- chr10 42797079 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:0,7,0
- chr10 42797093 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:8:3,5:0.62500:deepvariant:0,3,0
- chr10 53374463 . A C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,12,0
- chr10 63226466 . C A 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:16,12,0
- chr10 68054487 . G A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr10 72558805 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:7,2:0.22222:deepvariant:0,0,22
- chr10 72558996 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:7,3:0.30000:deepvariant:4,0,22
- chr10 72558999 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:0,0,18
- chr10 72559000 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:7,3:0.30000:deepvariant:1,0,21
- chr10 72559221 . T C 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:5,2:0.28571:small_model:16,0,39
- chr10 72740326 . T C 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:20,17,0
- chr10 76207023 . C T 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:1,3:0.75000:small_model:20,8,0
- chr10 76207085 . G A 34.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:34,17,0
- chr10 87385478 . C T 13.332 PASS H;FAU=0;FCU=8;FGU=0;FTU=4;RAU=0;RCU=12;RGU=0;RTU=6 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:30:0.3333:0,10:0:13:0,0:0:20:0:10:0:13:0:0
- chr10 98781187 . C T 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:21,9,0
- chr10 98781248 . C G 25.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:25,10,0
- chr10 107838477 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,18
- chr10 112127487 . G T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:2:6:0,3:0.50000:deepvariant:0,15,4
- chr10 118263323 . G T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:8:4,4:0.50000:small_model:9,0,19
- chr10 122807983 . C G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,12,0
- chr10 122807994 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,12,0
- chr10 122807995 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,14,0
- chr10 122807996 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,11,0
- chr10 122808026 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,14,0
- chr10 122808027 . G A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,11,0
- chr10 122808095 . A C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:9,17,0
- chr10 125104400 . G A 9.629 PASS FAU=6;FCU=0;FGU=5;FTU=0;RAU=5;RCU=0;RGU=14;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:30:0.3667:0,11:0:5:0,0:11:0:19:0:0:0:5:0
- chr10 125104964 . T C 29.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:32:0,7:0.21875:deepvariant:28,30,0
- chr10 125105036 . G A 73.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:34:0,34:0.20588:deepvariant:73,64,19
- chr10 125463267 . A C 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:9:3,6:0.66667:deepvariant:16,14,0
- chr10 127834694 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:3,2:0.40000:deepvariant:1,7,0
- chr10 128323747 . G A 21.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:6:2,4:0.66667:small_model:21,0,9
- chr10 128323764 . A G 28.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:28,17,0
- chr10 128323883 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:11,11,0
- chr10 129363250 . T G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,13
- chr10 129366504 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:4:2,2:0.50000:deepvariant:3,0,19
- chr10 129387253 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:4,3:0.42857:deepvariant:0,10,0
- chr10 129508555 . A C 29.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:14:9,5:0.35714:small_model:29,0,99
- chr10 129508643 . T C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:14:9,5:0.35714:small_model:17,0,39
- chr10 129508645 . G A 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:14:9,5:0.35714:small_model:17,0,35
- chr10 129508684 . C G 25.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:15:9,6:0.40000:small_model:25,0,48
- chr10 130443961 . T C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,17,0
- chr10 130444151 . G C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,23,0
- chr10 130445125 . T G 22.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:13:0,3:0.23077:small_model:22,38,17
- chr10 130954079 . G A 31.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:26,13,0
- chr10 131345753 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:9,2:0.18182:small_model:10,0,31
- chr10 131971677 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:1,0,4
- chr10 131971995 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,8
- chr10 131972005 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,7
- chr10 131972055 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,6,0
- chr10 131972058 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:1,6,0
- chr10 131972192 . G A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:6:3,3:0.50000:small_model:11,0,14
- chr10 131972216 . A G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:6,0,1
- chr10 131972218 . G C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:1,3:0.75000:deepvariant:6,0,2
- chr10 131972336 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:3,2:0.40000:deepvariant:0,2,0
- chr10 131972366 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:2,3:0.60000:deepvariant:1,0,0
- chr10 131972381 . C G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,16,0
- chr10 131972386 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,6,0
- chr10 131972401 . G A 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,19,0
- chr10 131972458 . A G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:4,7,0
- chr10 131972716 . C G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:1,3:0.75000:deepvariant:1,0,1
- chr10 131974042 . G C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,10,0
- chr10 131974489 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,19,0
- chr10 131975932 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:4,2:0.33333:deepvariant:2,0,11
- chr10 131975982 . C G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,7,0
- chr10 131977457 . G A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:12,15,0
- chr10 131977459 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,3:0.75000:deepvariant:8,16,0
- chr10 132313678 . T C 26.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:26,11,0
- chr10 132313737 . T C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,2,0
- chr10 132313757 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:0,2:0.66667:deepvariant:0,0,3
- chr10 132758159 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,11,0
- chr10 132758182 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:11,13,0
- chr10 132758209 . G A 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:22,12,0
- chr10 132758232 . A T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:15,12,0
- chr10 132758247 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,17,0
- chr10 132758661 . A C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:4,6,0
- chr10 132758718 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:2,7,0
- chr10 132758722 . G A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:deepvariant:15,21,0
- chr10 132758745 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,3:0.60000:deepvariant:1,9,0
- chr10 132758781 . A G 27.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:27,19,0
- chr10 132758831 . C A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:8:5,3:0.37500:small_model:13,0,34
- chr10 132760227 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,9,0
- chr10 132760239 . G C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,11,0
- chr10 132760244 . C A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,8,0
- chr10 132760281 . G C 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,17,0
- chr10 132760290 . C G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,11,0
- chr10 132760305 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,15,0
- chr10 132760347 . G A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,16,0
- chr10 132760363 . T C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,15,0
- chr10 132760370 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,14,0
- chr10 132760385 . C T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,17,0
- chr10 132760386 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,18,0
- chr10 132760390 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,15,0
- chr10 132760396 . T C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,19,0
- chr10 132778442 . T G 23.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:23,20,0
- chr10 132778502 . G T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:4,2:0.33333:deepvariant:2,0,20
- chr10 132778506 . A C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:6:4,2:0.33333:deepvariant:7,0,25
- chr10 132822497 . A G 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:6:4,2:0.33333:small_model:18,0,35
- chr10 132822500 . A G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:6:4,2:0.33333:small_model:9,0,20
- chr10 133335121 . C G 8.234 PASS FAU=0;FCU=4;FGU=3;FTU=0;RAU=0;RCU=5;RGU=5;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:17:0.4706:0,8:0:12:0,0:0:9:8:0:0:12:0:0
- chr10 133707597 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:13,8:0.38095:deepvariant:1,0,23
- chr10 133707600 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:13,8:0.38095:deepvariant:2,0,23
- chr10 133707606 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:13,8:0.38095:deepvariant:4,0,24
- chr10 133707608 . T C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:21:13,8:0.38095:deepvariant:5,0,24
- chr10 133707609 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:21:13,8:0.38095:deepvariant:3,0,24
- chr10 133707624 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:13,8:0.38095:deepvariant:5,0,24
- chr10 133707629 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:21:13,8:0.38095:small_model:9,0,25
- chr10 134063247 . A G 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:9:6,3:0.33333:small_model:20,0,41
- chr10 134063727 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:10:6,4:0.40000:small_model:10,0,30
- chr10 134064444 . A T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:6:4,2:0.33333:small_model:9,0,31
- chr10 134065113 . C G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:2,3:0.60000:small_model:10,0,16
- chr10 134065155 . C G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:4:1,3:0.75000:deepvariant:5,0,6
- chr10 134065249 . C A 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:7:4,3:0.42857:small_model:14,0,21
- chr11 89943 . C T 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:20,21,0
- chr11 89984 . A G 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,22,0
- chr11 92526 . G A 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:22,22,0
- chr11 92603 . G A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,14,0
- chr11 92702 . T C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,2:0.66667:small_model:11,13,0
- chr11 92795 . C G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,4,0
- chr11 93758 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,6,0
- chr11 94219 . G A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:deepvariant:12,13,0
- chr11 430161 . A G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:6:2,4:0.66667:small_model:17,0,22
- chr11 430921 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,12
- chr11 457395 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:9,8:0.47059:deepvariant:0,0,11
- chr11 577666 . C G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:5:3,2:0.40000:small_model:11,0,21
- chr11 577863 . G C 36 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:35:7:3,4:0.57143:small_model:35,0,40
- chr11 577890 . C G 21.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:8:2,6:0.75000:small_model:21,0,21
- chr11 577974 . G C 26.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:9:3,6:0.66667:small_model:26,0,32
- chr11 577975 . G C 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:9:3,6:0.66667:small_model:23,0,35
- chr11 578022 . G C 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:9:3,6:0.66667:small_model:21,0,31
- chr11 688618 . G A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,17,0
- chr11 688628 . C A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,19,0
- chr11 688638 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:8,19,0
- chr11 693266 . G C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:9,2:0.18182:small_model:10,0,35
- chr11 787036 . G T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:10:7,3:0.30000:deepvariant:7,0,26
- chr11 1036674 . G C 9.812 PASS H;FAU=0;FCU=5;FGU=6;FTU=0;RAU=0;RCU=2;RGU=3;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:16:0.4375:0,7:0:11:0,0:0:7:9:0:0:0:11:0
- chr11 1037268 . G C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:9,2:0.18182:deepvariant:10,0,32
- chr11 1037301 . G C 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:11:9,2:0.18182:deepvariant:12,0,33
- chr11 1037400 . G C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:12:8,3:0.25000:small_model:15,0,43
- chr11 1037433 . C G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:12:9,3:0.25000:deepvariant:5,0,23
- chr11 1079455 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:9,2:0.18182:deepvariant:0,0,22
- chr11 1366412 . G C 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:21,13,0
- chr11 1504003 . C T 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:18,10,0
- chr11 3186837 . G A 44.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:11:2,8:0.18182:deepvariant:44,40,34
- chr11 3289770 . C T 26.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:7:5,2:0.28571:small_model:26,0,50
- chr11 9790087 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:18,3:0.14286:deepvariant:0,0,22
- chr11 9790174 . A G 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:2,3:0.60000:small_model:14,0,11
- chr11 9790296 . A G 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:4:2,2:0.50000:small_model:16,0,29
- chr11 11333201 . C G 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:11:9,2:0.18182:small_model:18,0,43
- chr11 11649093 . C T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:5,3:0.37500:small_model:8,0,29
- chr11 11649105 . C T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:18,6:0.24000:deepvariant:5,0,0
- chr11 14370204 . T G 46.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:46:208:35,168:0.80769:small_model:46,99,0
- chr11 25051353 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:14,3:0.17647:deepvariant:0,0,23
- chr11 25051392 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:14,2:0.11765:deepvariant:1,0,24
- chr11 25052132 . G A 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:16:10,6:0.37500:small_model:20,0,36
- chr11 44274500 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:6:17:0,5:0.29412:deepvariant:9,6,43
- chr11 44706435 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,17,0
- chr11 44706553 . T C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:3:1,2:0.66667:small_model:9,0,14
- chr11 44706559 . T A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,16,0
- chr11 45259738 . C T 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:18:15,2:0.11111:deepvariant:16,0,40
- chr11 51355639 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:6,7:0.53846:deepvariant:0,7,0
- chr11 51953556 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:13:4,9:0.69231:deepvariant:9,5,0
- chr11 51963843 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:6,9:0.60000:deepvariant:1,4,0
- chr11 51964134 . A G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:17:4,13:0.76471:small_model:11,12,0
- chr11 51993033 . G A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,15,0
- chr11 52230950 . C G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,16,0
- chr11 52232288 . T C 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:2,5:0.71429:deepvariant:7,12,0
- chr11 52257491 . A C 26.5 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:8:6:0,2:0.33333:deepvariant:25,34,7
- chr11 52280163 . T C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:15:7,8:0.53333:deepvariant:5,5,0
- chr11 52281639 . G C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:11:2,9:0.81818:small_model:13,28,0
- chr11 52281863 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:12:6,6:0.50000:deepvariant:0,3,0
- chr11 52282713 . T C 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:11:1,10:0.90909:small_model:20,24,0
- chr11 52283232 . A C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:11:3,8:0.72727:deepvariant:5,11,0
- chr11 52283673 . A G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:11:3,8:0.72727:deepvariant:7,7,0
- chr11 52653938 . C A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,19,0
- chr11 55211371 . A T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:13,7:0.35000:deepvariant:5,0,14
- chr11 64227108 . T G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:6,5:0.45454:deepvariant:7,0,9
- chr11 64941863 . T A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:23:15,6:0.26087:small_model:11,0,25
- chr11 65730150 . C G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:6,3:0.33333:small_model:9,0,28
- chr11 65757299 . A G 23.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:9:7,2:0.22222:small_model:23,0,44
- chr11 67830355 . T C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:1,0,5
- chr11 67832283 . C A 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:17,13,0
- chr11 67839030 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,17,0
- chr11 67839033 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,15,0
- chr11 67839039 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,17,0
- chr11 67839046 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,18,0
- chr11 67839051 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,17,0
- chr11 67839058 . G C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,17,0
- chr11 67839062 . A G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,19,0
- chr11 67839067 . G T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,18,0
- chr11 67839070 . A T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,19,0
- chr11 67839089 . C G 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:7,16,0
- chr11 67839108 . G A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,17,0
- chr11 67839109 . C T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:6,18,0
- chr11 67839110 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,19,0
- chr11 67839114 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,19,0
- chr11 67839126 . C T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,16,0
- chr11 67839130 . A G 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,18,0
- chr11 67839133 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,16,0
- chr11 67839139 . C T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,18,0
- chr11 67839140 . C G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,15,0
- chr11 67841217 . A G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:16,17,0
- chr11 67841226 . C G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,13,0
- chr11 76531977 . T C 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:16,12,0
- chr11 77109049 . A C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:7:4,2:0.28571:small_model:10,0,35
- chr11 82435471 . C T 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:24:9,15:0.62500:small_model:18,0,31
- chr11 99825889 . G C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:6,4:0.40000:small_model:12,0,37
- chr11 99825939 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:0,0,17
- chr11 109239112 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:22,4:0.15385:deepvariant:1,0,23
- chr11 116144723 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:1,4:0.80000:deepvariant:0,0,0
- chr11 116833374 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:12,2:0.14286:deepvariant:0,0,21
- chr11 116833430 . A T 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:14:12,2:0.14286:small_model:13,0,40
- chr11 121138563 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,3:0.60000:deepvariant:2,9,0
- chr11 121138575 . T C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:deepvariant:14,21,0
- chr11 123018136 . A G 31.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:31:20:11,9:0.45000:small_model:31,0,47
- chr11 126307563 . G A 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:6:4,2:0.33333:small_model:22,0,41
- chr11 134898859 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:14:10,4:0.28571:small_model:10,0,30
- chr11 134899503 . C T 26.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:14:8,6:0.42857:small_model:26,0,36
- chr12 2774080 . C T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:8,6,0
- chr12 2774210 . A G 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:4:2,2:0.50000:small_model:14,0,34
- chr12 4126623 . G A 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:0,7:1.00000:small_model:24,12,0
- chr12 5624098 . T C 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:11:8,3:0.27273:small_model:17,0,36
- chr12 7150949 . A T 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:16:9,7:0.43750:small_model:16,0,23
- chr12 23192194 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:1,6:0.75000:deepvariant:0,7,0
- chr12 30995715 . A G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:6,2:0.25000:small_model:11,0,23
- chr12 34630499 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:13,5:0.27778:deepvariant:3,0,19
- chr12 34630737 . T G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:10,5:0.33333:deepvariant:1,0,9
- chr12 34631033 . G T 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:4:15:6,3:0.20000:deepvariant:21,14,28
- chr12 34631866 . G C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:4,6:0.60000:deepvariant:0,13,0
- chr12 34664757 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:25:17,8:0.32000:deepvariant:3,0,16
- chr12 34664974 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:26:19,7:0.26923:deepvariant:0,0,18
- chr12 34683096 . C T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:6,9:0.60000:deepvariant:5,0,2
- chr12 34683112 . G C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:6,9:0.60000:deepvariant:5,0,6
- chr12 34683172 . G T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:6,9:0.60000:deepvariant:5,0,10
- chr12 34684450 . C A 19 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:5:5:0,3:0.60000:deepvariant:17,34,4
- chr12 34686829 . C T 38.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:7:4,3:0.42857:small_model:38,0,24
- chr12 34686895 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:1,0,11
- chr12 34707382 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:11,4:0.26667:deepvariant:1,0,19
- chr12 35479053 . T C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:13,14,0
- chr12 35479392 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,13,0
- chr12 35774113 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:34:22,12:0.35294:deepvariant:0,0,5
- chr12 35774127 . A C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:34:22,12:0.35294:deepvariant:2,0,9
- chr12 35774204 . A T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:35:23,12:0.34286:deepvariant:7,0,11
- chr12 35774459 . T A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:35:22,13:0.37143:deepvariant:5,0,7
- chr12 35774526 . T A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:40:25,13:0.32500:deepvariant:5,0,9
- chr12 35876850 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:31:21,10:0.32258:deepvariant:1,0,18
- chr12 36295093 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:31:21,10:0.32258:deepvariant:0,0,13
- chr12 36329893 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:32:25,7:0.21875:deepvariant:0,0,18
- chr12 36330341 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:40:29,10:0.25000:deepvariant:1,0,15
- chr12 36375050 . G C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:10,4:0.28571:deepvariant:3,0,15
- chr12 36403325 . G T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,5:0.55556:deepvariant:0,0,5
- chr12 36425676 . T G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:3:1,2:0.66667:deepvariant:3,0,8
- chr12 36511589 . A T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:2,4:0.66667:deepvariant:7,0,6
- chr12 36511939 . A G 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:5:1,4:0.80000:deepvariant:8,0,4
- chr12 36512005 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:5:1,4:0.80000:deepvariant:8,0,5
- chr12 36684229 . A C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:4,4:0.50000:deepvariant:2,0,7
- chr12 36684286 . C T 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:7:3,4:0.57143:deepvariant:7,0,10
- chr12 36713866 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,14,0
- chr12 36725498 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:33:23,10:0.30303:deepvariant:0,0,19
- chr12 36793494 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,13,0
- chr12 36793519 . G C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,12,0
- chr12 36793559 . G C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,16,0
- chr12 36793560 . T G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:11,15,0
- chr12 36793568 . T C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:10,14,0
- chr12 36793573 . G A 21.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:21,14,0
- chr12 36793627 . C G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:13,16,0
- chr12 36793628 . T A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,16,0
- chr12 36793636 . G C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:12,16,0
- chr12 36793638 . C G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:11,12,0
- chr12 36793639 . A T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,14,0
- chr12 36793644 . C T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:13,16,0
- chr12 36793653 . C G 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:14,16,0
- chr12 36793674 . T A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,18,0
- chr12 36793684 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,17,0
- chr12 36793685 . T C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:13,20,0
- chr12 36793691 . G A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,17,0
- chr12 36793701 . C A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,18,0
- chr12 36793706 . T A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,23,0
- chr12 36793715 . A T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,19,0
- chr12 36793732 . T A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,19,0
- chr12 36793740 . C A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,19,0
- chr12 36793747 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:4,8,0
- chr12 36793761 . A C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,22,0
- chr12 36793762 . T G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:11,20,0
- chr12 36793764 . T A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,20,0
- chr12 36793770 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:10,19,0
- chr12 36793790 . C G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,18,0
- chr12 36793799 . A T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,19,0
- chr12 36793800 . T C 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:23,18,0
- chr12 36793810 . A G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,17,0
- chr12 36793812 . G T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,18,0
- chr12 36793817 . C A 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,17,0
- chr12 36793839 . C A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,16,0
- chr12 36793846 . C A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,18,0
- chr12 36793851 . G A 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:19,11,0
- chr12 36793863 . G C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,18,0
- chr12 36793865 . G C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,20,0
- chr12 36793866 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,19,0
- chr12 36793869 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:8,18,0
- chr12 36793879 . C G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,18,0
- chr12 36793885 . C G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,17,0
- chr12 36793888 . T A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,18,0
- chr12 36793889 . A C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,20,0
- chr12 36793894 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,16,0
- chr12 36793897 . T A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,19,0
- chr12 36793902 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,17,0
- chr12 36793904 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,19,0
- chr12 36793907 . C A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,19,0
- chr12 36793938 . C T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:14,19,0
- chr12 36793942 . T A 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:15,17,0
- chr12 36793982 . G T 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:13,13,0
- chr12 36793993 . A G 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:16,15,0
- chr12 36793997 . T C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:17,16,0
- chr12 36794000 . G C 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:15,13,0
- chr12 36794010 . C G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,14,0
- chr12 36794031 . G A 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:13,14,0
- chr12 36794055 . A T 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:12,13,0
- chr12 36794101 . A C 27.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:27,15,0
- chr12 36794113 . A T 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:16,17,0
- chr12 36794130 . A C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,20,0
- chr12 36794131 . C A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,22,0
- chr12 36794140 . G C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,17,0
- chr12 36794147 . T A 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,21,0
- chr12 36794150 . G A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,18,0
- chr12 36794169 . G T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,16,0
- chr12 36940592 . G A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:27:16,11:0.40741:deepvariant:3,0,13
- chr12 37012566 . G T 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:13:4,9:0.69231:deepvariant:10,1,0
- chr12 37012639 . C A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:3,10:0.76923:deepvariant:11,0,0
- chr12 37012709 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:10,2:0.16667:deepvariant:0,0,12
- chr12 37013116 . C A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:6,9:0.56250:deepvariant:10,0,5
- chr12 37014170 . G C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:17:10,7:0.41177:deepvariant:11,0,17
- chr12 37014910 . T G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,2:0.15385:deepvariant:2,0,14
- chr12 37015272 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,11
- chr12 37015369 . G A 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:7:4,3:0.42857:deepvariant:7,0,13
- chr12 37015450 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,6
- chr12 37074551 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,12
- chr12 37076400 . G C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:5,8:0.61538:deepvariant:7,0,8
- chr12 37076498 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:5,6:0.46154:small_model:3,0,9
- chr12 37076539 . G T 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:13:3,6:0.46154:deepvariant:10,0,3
- chr12 37078018 . T C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:7,5:0.41667:deepvariant:3,0,12
- chr12 37088009 . C A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:9,7:0.12500:deepvariant:3,5,34
- chr12 37096873 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:9,5:0.35714:deepvariant:0,0,20
- chr12 39941704 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:9,2:0.18182:deepvariant:1,0,27
- chr12 43444513 . C A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:0,7:1.00000:deepvariant:0,0,7
- chr12 72792311 . T C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:15:13,2:0.13333:small_model:9,0,36
- chr12 73078167 . T C 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:11:8,3:0.27273:small_model:21,0,42
- chr12 73627474 . A C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:10:8,2:0.20000:small_model:9,0,32
- chr12 101771697 . T C 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:16:9,7:0.43750:small_model:20,0,30
- chr12 103846790 . G A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:14:10,3:0.21429:small_model:14,0,39
- chr12 105641426 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:1,0,16
- chr12 108316581 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:0,0,25
- chr12 108550152 . G T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,2:0.50000:deepvariant:8,23,9
- chr12 108550827 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:4,3:0.42857:small_model:13,0,20
- chr12 108550853 . G A 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:7:4,3:0.42857:small_model:22,0,33
- chr12 108550905 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,18
- chr12 108550906 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:5,2:0.28571:deepvariant:3,0,19
- chr12 108551041 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,2:0.28571:deepvariant:2,0,18
- chr12 117727838 . A T 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:0,11,0
- chr12 118745077 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:11,4:0.26667:deepvariant:1,0,26
- chr12 121740998 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:9,9:0.50000:deepvariant:3,0,5
- chr12 123451743 . C A 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:9:0,8:0.88889:small_model:16,17,0
- chr12 124441713 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,16,0
- chr12 124441715 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:1,4,0
- chr12 124441724 . A T 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,23,0
- chr12 124443314 . G C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:7,3:0.30000:small_model:14,0,27
- chr12 124443333 . G A 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:10:6,3:0.30000:small_model:19,0,41
- chr12 124443388 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:6,3:0.33333:deepvariant:0,0,16
- chr12 126840264 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:7,4:0.36364:small_model:11,0,22
- chr12 127155957 . C A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:3,12:0.80000:deepvariant:2,0,31
- chr12 127506370 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,5,0
- chr12 127506380 . G T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,15,0
- chr12 128115253 . G A 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:8:6,2:0.25000:small_model:14,0,35
- chr12 128115295 . G A 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:8:6,2:0.25000:small_model:14,0,41
- chr12 128115338 . C A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:8:6,2:0.25000:small_model:16,0,35
- chr12 128115371 . T G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:7,2:0.20000:small_model:13,0,31
- chr12 129335099 . A T 23.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:23,14,0
- chr12 129861505 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:5,6:0.54545:deepvariant:0,0,10
- chr12 129890954 . A G 25 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:9:5,4:0.44444:small_model:24,0,41
- chr12 129890965 . A G 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:3,5:0.62500:small_model:17,0,11
- chr12 130375394 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:9,16,0
- chr12 130375396 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:4,14,0
- chr12 130375402 . T G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,14,0
- chr12 130375404 . G T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,3:0.60000:deepvariant:3,13,0
- chr12 130375412 . G C 26.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:deepvariant:26,21,0
- chr12 130375446 . T G 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:1,4:0.80000:deepvariant:16,14,0
- chr12 130375461 . C T 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:1,4:0.80000:deepvariant:20,17,0
- chr12 130375465 . G A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:small_model:15,15,0
- chr12 130375488 . T G 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:20,14,0
- chr12 130375841 . G A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:13,12,0
- chr12 130375908 . T G 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:21,9,0
- chr12 130375927 . G A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr12 130375940 . A G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:deepvariant:13,20,0
- chr12 130375942 . A G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:12,20,0
- chr12 130375948 . T G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:11,19,0
- chr12 130375992 . T G 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:23,10,0
- chr12 130376034 . T G 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:15,12,0
- chr12 130520240 . C G 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:13:11,2:0.15385:small_model:12,0,34
- chr12 131320328 . T C 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:3:1,2:0.66667:small_model:15,0,18
- chr12 131320340 . T A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:5,15,0
- chr12 131320373 . C T 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,18,0
- chr12 131320382 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr12 131320383 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,15,0
- chr12 131320384 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,15,0
- chr12 131320385 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,14,0
- chr12 131320418 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,11,0
- chr12 131435578 . T G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:5,7:0.16667:deepvariant:9,6,34
- chr12 131520303 . G C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:18:7,11:0.11111:deepvariant:9,9,26
- chr12 131520819 . A G 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:4:2,2:0.50000:small_model:16,0,23
- chr12 131961876 . C T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:2,3:0.60000:small_model:13,0,24
- chr12 131961897 . C T 23.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:5:2,3:0.60000:small_model:23,0,33
- chr12 131961918 . C T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:5:1,3:0.60000:small_model:12,0,18
- chr12 131961923 . C G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:5:3,2:0.40000:small_model:11,0,28
- chr12 131961981 . C T 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:12:10,2:0.16667:small_model:16,0,41
- chr12 131962170 . C T 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:18,19,0
- chr12 131964287 . T C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,8,0
- chr12 131964292 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,8,0
- chr12 131964307 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,8,0
- chr12 132211931 . C T 12.024 PASS H;FAU=0;FCU=5;FGU=0;FTU=6;RAU=0;RCU=0;RGU=0;RTU=7 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:12:18:0.7222:0,13:0.1:10:0,1:0:5:0:13:0:9:0:1
- chr12 132432862 . G A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:8,3:0.27273:small_model:11,0,35
- chr12 132432897 . C A 29 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:11:8,3:0.27273:small_model:28,0,50
- chr12 132434869 . G A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:13:11,2:0.15385:small_model:10,0,36
- chr12 132448154 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:11,3:0.21429:deepvariant:0,0,12
- chr12 132648746 . G T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:15,3:0.15789:deepvariant:0,0,26
- chr12 133006223 . T G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:1,3:0.75000:deepvariant:0,0,2
- chr12 133007491 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,13,0
- chr12 133007533 . T G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,19,0
- chr12 133011096 . T G 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,2:0.50000:deepvariant:11,17,6
- chr13 187071 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,3:0.60000:deepvariant:0,10,0
- chr13 254433 . C G 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:15,13,0
- chr13 259090 . A C 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:22,23,0
- chr13 266665 . C T 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,19,0
- chr13 266679 . C G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr13 266709 . A T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,15,0
- chr13 266735 . T A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,23,0
- chr13 279476 . G T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,15,0
- chr13 327038 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,13,0
- chr13 327103 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,13,0
- chr13 330478 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,11,0
- chr13 330479 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,14,0
- chr13 333530 . A C 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:20,19,0
- chr13 333672 . A T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,3:0.75000:small_model:13,13,0
- chr13 511556 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,17,0
- chr13 515126 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,14,0
- chr13 515197 . A G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:1,5:0.83333:small_model:11,22,0
- chr13 515198 . T G 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:1,5:0.83333:small_model:16,22,0
- chr13 515288 . G A 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:7:0,7:1.00000:small_model:15,32,0
- chr13 540210 . G A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,17,0
- chr13 540222 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,15,0
- chr13 540261 . C G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,24,0
- chr13 540267 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,33,0
- chr13 540291 . A T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,23,0
- chr13 540312 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,18,0
- chr13 540317 . T A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,23,0
- chr13 656661 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:0,13,0
- chr13 663847 . T A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:16,20,0
- chr13 766376 . C T 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:19,16,0
- chr13 999154 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:4,8:0.66667:deepvariant:0,7,0
- chr13 1096600 . G A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr13 1096615 . C A 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,24,0
- chr13 1096646 . T A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,29,0
- chr13 1096650 . C T 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,21,0
- chr13 1096652 . T A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,20,0
- chr13 1096803 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr13 1099955 . G C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,15,0
- chr13 1193053 . A C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:deepvariant:17,21,0
- chr13 1193182 . C A 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:14,12,0
- chr13 1290746 . G A 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:small_model:11,15,0
- chr13 1375367 . C T 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:7:3,4:0.57143:deepvariant:8,0,10
- chr13 1380228 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,7
- chr13 1383842 . G T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:11,8:0.40000:deepvariant:5,0,0
- chr13 1383916 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:14,7:0.33333:deepvariant:5,0,11
- chr13 1384105 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:15,7:0.31818:deepvariant:2,0,8
- chr13 1384537 . C T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:24:15,8:0.33333:deepvariant:7,0,7
- chr13 1389041 . G T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:2,0,9
- chr13 1420986 . A T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,22,0
- chr13 1476431 . G A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,21,0
- chr13 1476432 . A C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,28,0
- chr13 1476458 . C T 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,17,0
- chr13 1476515 . T A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,17,0
- chr13 1476606 . G A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr13 1476614 . C G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,22,0
- chr13 1476717 . C T 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,20,0
- chr13 1476810 . T C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,25,0
- chr13 1476829 . G C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:6,20,0
- chr13 1476832 . A G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,29,0
- chr13 1476915 . T A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,17,0
- chr13 1482162 . C A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:10,6:0.37500:deepvariant:5,0,18
- chr13 1566259 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,11,0
- chr13 1584540 . T G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,6:0.50000:deepvariant:2,16,2
- chr13 1644092 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:34:24,9:0.26471:deepvariant:0,0,13
- chr13 1779829 . A T 21.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:21,29,0
- chr13 1779996 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,14,0
- chr13 1912568 . T A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,21,0
- chr13 1912694 . T A 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:2:0,2:1.00000:small_model:20,25,0
- chr13 1925475 . T A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:3,5:0.62500:deepvariant:2,8,0
- chr13 1926889 . T A 26.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:7:0,7:1.00000:small_model:26,32,0
- chr13 1926947 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:2,5:0.71429:deepvariant:6,13,0
- chr13 1927004 . A G 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:7:0,7:1.00000:small_model:22,28,0
- chr13 1927050 . C A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:3,4:0.57143:deepvariant:1,9,0
- chr13 1927168 . T C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:small_model:12,19,0
- chr13 1927262 . T A 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:22,25,0
- chr13 1927646 . G C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,3:0.75000:deepvariant:3,16,0
- chr13 1927703 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,17,0
- chr13 1927899 . C A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:5,14,0
- chr13 1927917 . C A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,14,0
- chr13 1928260 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:3,4,0
- chr13 1928889 . A G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:4,4:0.50000:deepvariant:5,0,3
- chr13 1929109 . A C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:4,4:0.50000:deepvariant:2,0,5
- chr13 2026621 . T A 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:21,21,0
- chr13 2066127 . G T 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:19,27,0
- chr13 2067534 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr13 2161222 . C A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:13,26,0
- chr13 2161224 . T A 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:5:0,5:1.00000:small_model:24,31,0
- chr13 2161240 . A C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:15,27,0
- chr13 2161292 . T A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,19,0
- chr13 2161334 . G A 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:18,37,0
- chr13 2161359 . A C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:19,26,0
- chr13 2161794 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:1,14,0
- chr13 2161849 . G T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:0,12,0
- chr13 2161992 . T A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:9:1,8:0.88889:deepvariant:13,18,0
- chr13 2162081 . A C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:8:1,6:0.75000:small_model:11,23,0
- chr13 2162109 . C A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:10:2,7:0.70000:deepvariant:8,15,0
- chr13 2162188 . G A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:10:1,9:0.90000:small_model:10,15,0
- chr13 2162226 . G C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:10:2,8:0.80000:small_model:14,18,0
- chr13 2163025 . T G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:4,7:0.63636:deepvariant:2,6,0
- chr13 2163971 . G C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:3,0,7
- chr13 2165208 . G C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:9,6:0.40000:deepvariant:2,0,14
- chr13 2168911 . C A 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:20,26,0
- chr13 2169053 . A C 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:20,24,0
- chr13 2169083 . G A 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,24,0
- chr13 2169085 . A C 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:3:0,3:1.00000:small_model:22,34,0
- chr13 2377071 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,12,0
- chr13 2381408 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:35:12,23:0.65714:deepvariant:8,6,0
- chr13 2381491 . A T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:36:13,23:0.63889:deepvariant:6,4,0
- chr13 2381663 . A C 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:38:13,25:0.65790:deepvariant:6,11,0
- chr13 2381724 . C G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:38:13,24:0.63158:deepvariant:1,10,0
- chr13 2381729 . G C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:38:13,25:0.65790:deepvariant:0,9,0
- chr13 2422024 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:2,15,0
- chr13 2422105 . C A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,20,0
- chr13 2422108 . C G 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:1,4:0.80000:small_model:14,27,0
- chr13 2422809 . G A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:small_model:9,20,0
- chr13 2423191 . A T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:9:1,8:0.88889:small_model:10,28,0
- chr13 2499976 . T A 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:20,25,0
- chr13 2499987 . C G 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:22,26,0
- chr13 2500081 . G T 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,17,0
- chr13 2500085 . T G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,22,0
- chr13 2500178 . T C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:16,11,0
- chr13 2500288 . G C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,20,0
- chr13 2500306 . G T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,19,0
- chr13 2500320 . G C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:6,23,0
- chr13 2500345 . C T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:9,22,0
- chr13 2500464 . G A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:11,20,0
- chr13 2500474 . A T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,22,0
- chr13 2500484 . T G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:2,17,0
- chr13 2500517 . T G 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:16,19,0
- chr13 2500552 . T A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,22,0
- chr13 2500599 . C G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,20,0
- chr13 2500614 . C G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,16,0
- chr13 2500723 . C T 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:15,13,0
- chr13 2500768 . T A 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:16,14,0
- chr13 2634637 . G C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:4,0,11
- chr13 2739167 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:2,6:0.66667:deepvariant:4,16,0
- chr13 2752372 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,2:0.50000:deepvariant:0,11,0
- chr13 2754325 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:6,5:0.45454:deepvariant:1,0,8
- chr13 2781988 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:14:4,7:0.50000:deepvariant:2,1,0
- chr13 2782032 . T A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:4,9:0.64286:deepvariant:2,7,0
- chr13 2782035 . A T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:13:4,9:0.69231:deepvariant:2,7,0
- chr13 2909579 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,12,0
- chr13 3029530 . C A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,5:0.83333:small_model:13,14,0
- chr13 3070131 . G C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:10:5,5:0.50000:deepvariant:0,0,3
- chr13 3100891 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:33:21,12:0.36364:deepvariant:4,0,7
- chr13 3101797 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:29:18,10:0.34483:deepvariant:1,0,5
- chr13 3103242 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:11,7:0.38889:deepvariant:3,0,7
- chr13 3103469 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:9,7:0.43750:deepvariant:1,0,2
- chr13 3103590 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:9,6:0.40000:deepvariant:0,0,6
- chr13 3103693 . G A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:4,11:0.73333:deepvariant:5,1,0
- chr13 3141505 . T G 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:18,19,0
- chr13 3141534 . T A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,18,0
- chr13 3141545 . C T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:10,12,0
- chr13 3141598 . C A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr13 3141622 . G C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,16,0
- chr13 3141682 . C G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,18,0
- chr13 3141687 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,17,0
- chr13 3141720 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr13 3141766 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,17,0
- chr13 3141863 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr13 3141890 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr13 3141897 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr13 3191368 . T G 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:21,27,0
- chr13 3291282 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,4:0.66667:deepvariant:0,12,0
- chr13 3317766 . C T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:16,13,0
- chr13 3418513 . A G 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:18,26,0
- chr13 3427269 . A T 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:deepvariant:14,14,0
- chr13 3427373 . G A 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:21,19,0
- chr13 3427593 . C T 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:5:0,5:1.00000:small_model:23,27,0
- chr13 3441127 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,17,0
- chr13 3441542 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,19,0
- chr13 3442197 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:3,4:0.57143:deepvariant:2,12,0
- chr13 3479551 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,13,0
- chr13 3597011 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:6,5:0.45454:deepvariant:1,0,7
- chr13 3620035 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:2,6:0.75000:deepvariant:0,9,0
- chr13 3662754 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:5,8:0.61538:deepvariant:2,0,2
- chr13 3819965 . A T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,25,0
- chr13 3820056 . G T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,19,0
- chr13 3868651 . A T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,12,0
- chr13 3873020 . G T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,8,0
- chr13 3993776 . C A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:6,8:0.57143:deepvariant:5,4,0
- chr13 3993814 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:6,7:0.53846:deepvariant:1,4,0
- chr13 3993845 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:13:8,5:0.38462:deepvariant:0,0,3
- chr13 3998941 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,14
- chr13 4119178 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,13,0
- chr13 4151474 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,16,0
- chr13 4151493 . T A 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:16,30,0
- chr13 4230534 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,2:0.50000:deepvariant:0,14,0
- chr13 4231029 . A G 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,2:0.50000:deepvariant:15,36,0
- chr13 4321622 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:10:5,5:0.50000:deepvariant:0,0,4
- chr13 4444911 . G T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:5,4:0.44444:deepvariant:4,0,2
- chr13 4445331 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:8:2,6:0.75000:small_model:10,13,0
- chr13 4487689 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:28:17,11:0.39286:deepvariant:0,0,14
- chr13 4570432 . G T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,3:0.75000:small_model:11,15,0
- chr13 4589283 . T A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:3,19,0
- chr13 4589289 . C T 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,27,0
- chr13 4589590 . T A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,9,0
- chr13 4635356 . C G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:20:7,13:0.65000:deepvariant:2,4,0
- chr13 4649250 . T C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:9,6:0.40000:deepvariant:5,0,15
- chr13 4661363 . C T 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:20,25,0
- chr13 4662117 . A T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:small_model:10,21,0
- chr13 4720078 . T A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:8,3,0
- chr13 4726361 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:3,7:0.70000:deepvariant:1,10,0
- chr13 4729591 . C T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,18,0
- chr13 4729602 . A T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,17,0
- chr13 4730948 . G A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,17,0
- chr13 4731064 . C T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,22,0
- chr13 4731071 . T A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,18,0
- chr13 4742315 . A C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:20:10,10:0.50000:deepvariant:9,2,0
- chr13 4758475 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:3,6:0.66667:deepvariant:2,9,0
- chr13 4852052 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:21:8,13:0.61905:deepvariant:1,6,0
- chr13 4857460 . G A 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,24,0
- chr13 4857461 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:2,18,0
- chr13 4857470 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,15,0
- chr13 4857480 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,18,0
- chr13 4857494 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:1,18,0
- chr13 4858994 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:2,5:0.71429:deepvariant:6,16,0
- chr13 4923229 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:13,8:0.38095:deepvariant:0,0,13
- chr13 4923378 . G A 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:21:11,10:0.47619:deepvariant:6,0,11
- chr13 4964598 . G A 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:8,11:0.57895:deepvariant:5,0,3
- chr13 5341420 . T C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:6,3:0.33333:deepvariant:5,0,15
- chr13 5341690 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:6,3:0.33333:deepvariant:3,0,15
- chr13 5341999 . G C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:5,3:0.37500:deepvariant:5,0,8
- chr13 5342058 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,5
- chr13 5342862 . C G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:7,3:0.30000:deepvariant:5,0,16
- chr13 5343029 . C G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:8,3:0.27273:deepvariant:4,0,14
- chr13 5343990 . G C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:3,0,6
- chr13 5344161 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:1,0,13
- chr13 5344198 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:0,0,12
- chr13 5344535 . A G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:6,3:0.33333:deepvariant:5,0,15
- chr13 5344605 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:6,2:0.25000:deepvariant:2,0,13
- chr13 9115703 . T C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,3:0.75000:deepvariant:6,16,0
- chr13 10238282 . A T 25.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:9:0,8:0.88889:small_model:25,30,0
- chr13 10239251 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:1,5:0.41667:deepvariant:0,10,0
- chr13 10239283 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:8:0,8:1.00000:small_model:8,25,0
- chr13 10336880 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:77:67,8:0.10390:1,22,0
- chr13 10337060 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:75:67,8:0.10667:1,21,0
- chr13 10337597 . A C 12.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:13:71:61,10:0.14085:12,28,0
- chr13 10338195 . C T 13.5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:13:68:58,10:0.14706:13,22,0
- chr13 10338429 . T C 8.206 PASS H;FAU=0;FCU=4;FGU=0;FTU=25;RAU=0;RCU=8;RGU=0;RTU=26 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:63:0.1905:0,12:0:18:0,0:0:12:0:51:0:0:0:18
- chr13 10515137 . G T 12.185 PASS H;FAU=0;FCU=0;FGU=21;FTU=6;RAU=0;RCU=0;RGU=12;RTU=5 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:12:44:0.25:0,11:0:10:0,0:0:0:33:11:0:0:10:0
- chr13 11737813 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:8,5:0.38462:deepvariant:4,0,22
- chr13 11813143 . G C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:7,11:0.57895:deepvariant:9,0,7
- chr13 12308429 . T A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:14,10,0
- chr13 12308658 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,10,0
- chr13 12308701 . C A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,19,0
- chr13 12308710 . T A 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,21,0
- chr13 12308742 . G T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,18,0
- chr13 12308746 . C T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,22,0
- chr13 12308874 . C G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:17,16,0
- chr13 12320455 . G A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,5:0.83333:small_model:15,13,0
- chr13 12320488 . T C 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:17,25,0
- chr13 12320493 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:10,23,0
- chr13 12320494 . T C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:17,29,0
- chr13 12320512 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,6:1.00000:deepvariant:0,19,0
- chr13 12320538 . T G 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:11,26,0
- chr13 12320542 . G T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,6:1.00000:deepvariant:6,23,0
- chr13 12320543 . A C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,27,0
- chr13 12320663 . C T 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:18,17,0
- chr13 12320765 . A G 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:14,17,0
- chr13 12320818 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:small_model:13,16,0
- chr13 12320828 . C A 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:15,21,0
- chr13 12320862 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,13,0
- chr13 12320869 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:2,15,0
- chr13 12320891 . C G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,17,0
- chr13 12320897 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:10,19,0
- chr13 12440345 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:3,0,9
- chr13 12547813 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:37:25,12:0.32432:small_model:11,0,15
- chr13 13948779 . G C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:6,6:0.50000:deepvariant:0,0,18
- chr13 13949059 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:6,7:0.53846:deepvariant:1,0,16
- chr13 14905894 . A C 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:0,8:0.37500:deepvariant:18,29,3
- chr13 14960937 . A C 24.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:7:0,7:1.00000:small_model:24,30,0
- chr13 14961611 . T C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,18,0
- chr13 14961612 . A G 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:20,23,0
- chr13 14961648 . T C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,19,0
- chr13 15066958 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:12,6:0.33333:deepvariant:0,0,13
- chr13 15067688 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,5:0.27778:deepvariant:0,0,15
- chr13 15117621 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:2,0,11
- chr13 15124716 . G T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:14,11:0.44000:deepvariant:1,0,7
- chr13 16994826 . G T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:2,7:0.77778:deepvariant:5,0,3
- chr13 16999218 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:10,3:0.23077:deepvariant:0,0,15
- chr13 17147509 . G T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,16,0
- chr13 17155771 . T A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr13 17156072 . A G 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:18,15,0
- chr13 17157262 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,14,0
- chr13 17157309 . C G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,18,0
- chr13 17157325 . G A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,21,0
- chr13 17190768 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:21:8,11:0.52381:deepvariant:1,0,0
- chr13 17190895 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:8,14:0.63636:deepvariant:0,0,4
- chr13 17201347 . A T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,22,0
- chr13 17201825 . C G 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,25,0
- chr13 17201841 . G A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,29,0
- chr13 17201849 . A G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,32,0
- chr13 17258604 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:11,5:0.31250:deepvariant:1,0,11
- chr13 17259249 . C G 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:8,6:0.42857:deepvariant:6,0,9
- chr13 17259750 . C T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:5,0,10
- chr13 17259857 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:4,0,8
- chr13 17260130 . C T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:9,5:0.35714:deepvariant:5,0,10
- chr13 17370184 . C G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,9,0
- chr13 17674301 . A G 31.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:32:15:11,4:0.26667:small_model:31,0,58
- chr13 22067598 . C T 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:12:3:0,3:1.00000:small_model:0,84,75
- chr13 23397186 . C A 37.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:25:1,24:0.24000:deepvariant:37,44,24
- chr13 23730906 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:13:11,2:0.15385:small_model:10,0,38
- chr13 23730943 . T G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:13:11,2:0.15385:small_model:9,0,36
- chr13 24178980 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:12,2:0.14286:small_model:9,0,35
- chr13 24368488 . G A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:7,8,0
- chr13 24368754 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:13:11,2:0.15385:small_model:13,0,41
- chr13 26282402 . A G 55.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:53:8:2,6:0.75000:small_model:55,57,0
- chr13 30808207 . G T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:10:1,9:0.90000:deepvariant:7,7,0
- chr13 31935461 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:1,0,21
- chr13 39295722 . A G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:16:11,5:0.31250:deepvariant:12,0,33
- chr13 41696325 . T C 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:16:13,3:0.18750:small_model:17,0,47
- chr13 65365713 . G T 11.369 PASS FAU=0;FCU=0;FGU=8;FTU=3;RAU=0;RCU=0;RGU=11;RTU=2 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:24:0.2083:0,5:0:10:0,0:0:0:19:5:0:0:10:0
- chr13 66829287 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:13,3:0.18750:deepvariant:1,0,19
- chr13 68469472 . T C 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:21:16,5:0.23810:deepvariant:11,0,34
- chr13 74033298 . C T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:13,4:0.23529:deepvariant:5,0,24
- chr13 74033388 . T C 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:18:14,4:0.22222:deepvariant:7,0,23
- chr13 74033413 . T G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,4:0.22222:deepvariant:1,0,18
- chr13 77762467 . G A 24.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,16,0
- chr13 79935830 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:9,2:0.18182:small_model:9,0,36
- chr13 82080035 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:10,19,0
- chr13 84976879 . C G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:16:13,3:0.18750:small_model:12,0,37
- chr13 85453985 . G T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:5:15:6,4:0.26667:deepvariant:10,4,40
- chr13 85982632 . T A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:3,2:0.40000:small_model:11,0,16
- chr13 91186442 . A C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:9:6,3:0.33333:deepvariant:6,0,22
- chr13 94331360 . A C 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:18,9,0
- chr13 109484415 . A C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:6,2:0.25000:deepvariant:2,0,13
- chr13 110556149 . A G 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:8:6,2:0.25000:small_model:14,0,42
- chr13 110749418 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:1,0,11
- chr13 111002648 . G T 3.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:26:22,4:0.15385:1,17,0
- chr13 111002912 . T G 8.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:9:27:22,4:0.14815:8,24,0
- chr13 111528681 . C T 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:27:16,11:0.40741:small_model:10,0,24
- chr13 111529846 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:8,6:0.42857:deepvariant:2,0,21
- chr13 111529945 . C T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:16:8,8:0.50000:small_model:14,0,17
- chr13 111530242 . T G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:10,8:0.44444:deepvariant:2,0,21
- chr13 111530315 . A T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:11,5:0.31250:deepvariant:4,0,23
- chr13 111541562 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:9,2:0.18182:deepvariant:1,0,27
- chr13 111541635 . T A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:9,2:0.18182:deepvariant:3,0,26
- chr13 111786948 . C T 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:17,30,0
- chr13 111786969 . A G 21.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:21,18,0
- chr13 111786995 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:1,6,0
- chr13 111787003 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,16,0
- chr13 111787025 . C A 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:21,18,0
- chr13 111787048 . C T 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:18,20,0
- chr13 111787057 . A G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,21,0
- chr13 111787061 . G T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:8,19,0
- chr13 111787094 . A G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,22,0
- chr13 111787097 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,4,0
- chr13 111787127 . T C 25.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:25,18,0
- chr13 111787134 . A G 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,19,0
- chr13 111787507 . A G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:11,15,0
- chr13 112484653 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,6:0.33333:deepvariant:2,0,17
- chr13 112600061 . T C 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:8:5,3:0.37500:small_model:14,0,26
- chr13 112600071 . C T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:8:5,3:0.37500:small_model:14,0,30
- chr13 112626764 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,10,0
- chr13 112631249 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:1,3:0.75000:deepvariant:2,0,0
- chr13 112669122 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:11,6:0.35294:deepvariant:2,0,5
- chr13 113208188 . T C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:13,16,0
- chr13 113216868 . A T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:5,3:0.37500:small_model:10,0,20
- chr13 113278731 . T C 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:20,15,0
- chr13 113307036 . T G 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:7:1,6:0.85714:small_model:17,9,0
- chr13 113355364 . A C 36.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:1,4:0.80000:small_model:36,15,0
- chr13 113407131 . T C 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:3,2:0.40000:small_model:14,0,26
- chr13 113440226 . C G 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:9:7,2:0.22222:small_model:14,0,38
- chr14 11157 . T A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:35:19,16:0.45714:deepvariant:4,0,20
- chr14 264695 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,12
- chr14 296624 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,4,0
- chr14 296831 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,4:0.57143:deepvariant:1,3,0
- chr14 298184 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:5,5:0.50000:deepvariant:8,0,8
- chr14 299444 . A C 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:2,5:0.28571:deepvariant:5,6,5
- chr14 300208 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:8:4,4:0.50000:deepvariant:1,0,0
- chr14 300532 . A T 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:0,3:0.42857:deepvariant:20,6,0
- chr14 300596 . C A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,3:0.42857:deepvariant:2,2,0
- chr14 319407 . T A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:0.50000:deepvariant:16,31,4
- chr14 319603 . A C 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:0.50000:deepvariant:16,23,1
- chr14 328767 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:8,7:0.46667:deepvariant:2,0,11
- chr14 341556 . A C 32 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:10:0,10:0.30000:deepvariant:31,30,19
- chr14 346815 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:2,4:0.57143:deepvariant:2,1,0
- chr14 367218 . A G 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,4:0.66667:deepvariant:19,29,0
- chr14 768842 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:74:66,8:0.10811:1,4,0
- chr14 769131 . T A 9.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:75:62,11:0.14667:8,9,0
- chr14 769205 . A C 10.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:76:64,12:0.15789:8,6,0
- chr14 769431 . A G 6.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:75:64,11:0.14667:4,6,0
- chr14 769850 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:2:92:80,11:0.11957:0,1,0
- chr14 1035037 . C A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,18,0
- chr14 1046779 . A T 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:12:2,10:0.83333:small_model:10,26,0
- chr14 1051369 . C G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:small_model:13,18,0
- chr14 1051476 . C T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,34,0
- chr14 1053217 . A G 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:10:0,10:1.00000:small_model:18,19,0
- chr14 1254230 . T C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:5:7:4,3:0.42857:deepvariant:0,27,34
- chr14 1254286 . A G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:4:7:3,4:0.57143:deepvariant:0,28,33
- chr14 1254315 . A C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:3:9:4,5:0.55556:deepvariant:0,29,31
- chr14 1254343 . C A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:3:8:2,6:0.75000:deepvariant:0,30,29
- chr14 1260444 . A T 23.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:23,12,0
- chr14 1260493 . C T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,12,0
- chr14 1260498 . G A 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:13,14,0
- chr14 1260544 . A T 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,16,0
- chr14 2929221 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:17,2:0.10526:deepvariant:4,0,32
- chr14 2929292 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:16,2:0.11111:deepvariant:1,0,32
- chr14 2929408 . G T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:19:17,2:0.10526:deepvariant:10,0,41
- chr14 2929480 . G A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:17,2:0.10526:deepvariant:4,0,34
- chr14 2929501 . T G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:17,2:0.10526:deepvariant:4,0,36
- chr14 2929611 . T C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:19:17,2:0.10526:deepvariant:13,0,44
- chr14 3285907 . G T 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:24:14,10:0.41667:small_model:22,0,38
- chr14 3620200 . C T 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:12:6,6:0.50000:deepvariant:8,0,14
- chr14 3730053 . C T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:0,19,0
- chr14 3735941 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,19,0
- chr14 3737361 . G A 28.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:6:0,6:1.00000:small_model:28,26,0
- chr14 3738026 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:0,7:1.00000:small_model:9,33,0
- chr14 3744151 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,3:0.60000:deepvariant:0,19,0
- chr14 3772195 . T C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:0.40000:deepvariant:12,32,4
- chr14 3809488 . G C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,17,0
- chr14 3811653 . T G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:9:0,7:0.22222:small_model:10,37,10
- chr14 3850057 . A C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:0,7:1.00000:small_model:5,30,0
- chr14 3887220 . C G 8.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:36:16,20:0.55556:7,6,0
- chr14 3887734 . T C 9.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:35:17,18:0.51429:7,3,0
- chr14 3899712 . G C 24.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:8:0,8:0.37500:deepvariant:24,39,14
- chr14 3902020 . G A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:5,8,0
- chr14 3902248 . G C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr14 3902268 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr14 4170381 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:0,0,10
- chr14 4242534 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:10,8:0.44444:deepvariant:0,0,8
- chr14 4245755 . G C 28.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:13:0,6:0.15385:deepvariant:28,86,21
- chr14 4262112 . C T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:14:11,3:0.21429:small_model:10,0,38
- chr14 4264403 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:10:8,2:0.20000:small_model:10,0,34
- chr14 4299658 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:15,7:0.31818:deepvariant:1,0,18
- chr14 4312865 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:6,5:0.45454:deepvariant:5,0,15
- chr14 4312932 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:6,5:0.45454:deepvariant:2,0,19
- chr14 4312996 . T G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:6,5:0.45454:deepvariant:0,0,15
- chr14 4378865 . C T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:3,2:0.40000:small_model:13,0,41
- chr14 4449478 . G A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:7,6:0.46154:deepvariant:4,0,24
- chr14 4449631 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:8,5:0.38462:deepvariant:4,0,25
- chr14 4683559 . C T 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:8:6,2:0.25000:small_model:16,0,38
- chr14 4683621 . A T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:8:6,2:0.25000:small_model:11,0,31
- chr14 4695050 . T G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:1,9:0.81818:deepvariant:1,16,0
- chr14 4695086 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:12:2,10:0.83333:deepvariant:1,17,0
- chr14 4695252 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:1,10:0.83333:deepvariant:0,18,0
- chr14 4695561 . C A 25.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:10:5,5:0.50000:small_model:25,53,0
- chr14 4695599 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:3,8:0.72727:deepvariant:2,12,0
- chr14 4695679 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:3,7:0.70000:deepvariant:1,17,0
- chr14 4695709 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:11:3,8:0.72727:small_model:10,15,0
- chr14 4695716 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:3,6:0.66667:deepvariant:2,18,0
- chr14 4695801 . T C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:10:4,6:0.60000:small_model:9,14,0
- chr14 4695958 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:3,7:0.70000:deepvariant:0,13,0
- chr14 4696159 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:10:4,6:0.60000:deepvariant:4,18,0
- chr14 4696287 . C T 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:7:0,7:1.00000:small_model:19,27,0
- chr14 4696367 . C T 41.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:8:0,5:0.62500:deepvariant:40,49,6
- chr14 4696496 . G T 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:0,5:0.71429:small_model:18,21,0
- chr14 4696550 . C T 38.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,4:0.57143:deepvariant:38,48,15
- chr14 4697029 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:1,11,0
- chr14 4701028 . A C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:7:0,7:1.00000:deepvariant:7,15,0
- chr14 4701031 . C G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,7:1.00000:small_model:15,20,0
- chr14 4701780 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:2,18,0
- chr14 4702164 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,20,0
- chr14 4702292 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,21,0
- chr14 4702407 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:4,22,0
- chr14 4702408 . A T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,27,0
- chr14 4702463 . A T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,19,0
- chr14 4702716 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:2,17,0
- chr14 4702775 . A C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,22,0
- chr14 4702902 . C T 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,3:0.75000:deepvariant:7,22,0
- chr14 4702905 . A C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:8,23,0
- chr14 4703090 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:4,20,0
- chr14 4748573 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,5:0.71429:deepvariant:2,12,0
- chr14 4771758 . A C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,36,0
- chr14 4910568 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:8,9:0.52941:deepvariant:2,0,22
- chr14 4910601 . T A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:10,9:0.47368:deepvariant:5,0,23
- chr14 4910735 . A C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:20:10,10:0.50000:small_model:11,0,18
- chr14 4910793 . G C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:20:10,10:0.50000:deepvariant:11,0,23
- chr14 4910911 . A T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:9,8:0.47059:deepvariant:6,0,21
- chr14 4910954 . A C 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:18:8,8:0.44444:small_model:8,0,21
- chr14 4911068 . G A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:16:9,7:0.43750:deepvariant:13,0,19
- chr14 4911171 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:5,9:0.64286:deepvariant:1,0,6
- chr14 4911213 . G C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:6,7:0.53846:deepvariant:2,0,10
- chr14 4911296 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:5,7:0.58333:deepvariant:1,0,6
- chr14 4911329 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:5,9:0.64286:deepvariant:2,0,14
- chr14 4911359 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:7,7:0.50000:deepvariant:0,0,11
- chr14 4911371 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:5,7:0.50000:small_model:1,0,13
- chr14 4911389 . A C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:7,7:0.50000:deepvariant:4,0,15
- chr14 4967914 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:8,4:0.33333:deepvariant:5,0,20
- chr14 4968141 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:1,0,20
- chr14 5076358 . A G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:8,2:0.20000:small_model:12,0,36
- chr14 5076878 . C T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:8,2:0.20000:small_model:11,0,41
- chr14 5076949 . T C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:8,2:0.20000:small_model:11,0,33
- chr14 5078332 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:9,2:0.18182:deepvariant:4,0,23
- chr14 5078771 . G C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:7,2:0.22222:deepvariant:0,0,18
- chr14 5079601 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,2:0.22222:deepvariant:2,0,14
- chr14 5102219 . C T 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:8:5,3:0.37500:small_model:23,0,43
- chr14 5102225 . C T 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:8:5,3:0.37500:small_model:20,0,36
- chr14 5102272 . G A 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:8:5,3:0.37500:small_model:22,0,41
- chr14 5102287 . A G 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:7:4,3:0.42857:small_model:21,0,42
- chr14 5102329 . C T 23.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:8:5,3:0.37500:small_model:23,0,42
- chr14 5102339 . G A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:8:5,3:0.37500:small_model:17,0,38
- chr14 5102389 . C G 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:8:6,2:0.25000:small_model:24,0,44
- chr14 5102470 . G A 25 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:10:7,3:0.30000:small_model:24,0,69
- chr14 5102575 . T C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:9:7,2:0.22222:small_model:17,0,44
- chr14 5102826 . A C 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:9:7,2:0.22222:small_model:18,0,44
- chr14 5102853 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:9:7,2:0.22222:small_model:10,0,35
- chr14 5102865 . T C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:7,2:0.22222:small_model:11,0,37
- chr14 5102962 . C G 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:8:6,2:0.25000:small_model:19,0,45
- chr14 5103017 . C T 23.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:7:5,2:0.28571:small_model:23,0,47
- chr14 5103086 . A G 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:7:5,2:0.28571:small_model:24,0,48
- chr14 5103181 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:7:4,2:0.28571:0,3,0
- chr14 5103234 . A C 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:7:5,2:0.28571:deepvariant:8,0,29
- chr14 5103281 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:2,0,23
- chr14 5103285 . T G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:4,3:0.42857:deepvariant:4,0,21
- chr14 5103454 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:7,2:0.22222:deepvariant:0,0,15
- chr14 5103520 . T C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:10:8,2:0.20000:small_model:9,0,30
- chr14 5103571 . T C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:10:8,2:0.20000:deepvariant:7,0,28
- chr14 5103631 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:9:7,2:0.22222:small_model:11,0,33
- chr14 5103646 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:1,0,23
- chr14 5103696 . A C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:6,2:0.25000:small_model:10,0,32
- chr14 5108236 . G A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:5:3,2:0.40000:small_model:11,0,41
- chr14 5149686 . C G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:8:6,2:0.25000:small_model:11,0,46
- chr14 5302333 . A T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,21,0
- chr14 5302337 . C G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:2,21,0
- chr14 5302338 . A T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:11,32,0
- chr14 5302341 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,21,0
- chr14 5302351 . G C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:6,22,0
- chr14 5302355 . A C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:3,19,0
- chr14 5302358 . T G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,20,0
- chr14 5302359 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,21,0
- chr14 5302365 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,21,0
- chr14 5302369 . G C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:4,23,0
- chr14 5302375 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:4,21,0
- chr14 5302376 . A C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:2,19,0
- chr14 5302381 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,20,0
- chr14 5302389 . C A 26.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:4:0,4:1.00000:small_model:26,39,0
- chr14 5302462 . A C 30.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:30:3:0,3:1.00000:small_model:30,42,0
- chr14 5302516 . C G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr14 5302518 . T C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,18,0
- chr14 5302521 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,17,0
- chr14 5302522 . T A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,18,0
- chr14 5302545 . T G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,20,0
- chr14 5302553 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,20,0
- chr14 5302555 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,19,0
- chr14 5302564 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,16,0
- chr14 5302570 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,16,0
- chr14 5302571 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr14 5302576 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr14 5302580 . G T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,17,0
- chr14 5302583 . T C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,16,0
- chr14 5302591 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,19,0
- chr14 5302595 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr14 5302604 . G C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,21,0
- chr14 5302613 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,19,0
- chr14 5358817 . C A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:7:5,2:0.28571:small_model:9,0,38
- chr14 5358855 . G A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:6,2:0.25000:small_model:10,0,30
- chr14 5358921 . C A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:8:6,2:0.25000:small_model:12,0,43
- chr14 5358961 . A T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:small_model:9,0,29
- chr14 5359031 . G C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:small_model:9,0,25
- chr14 5363509 . T C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:18:16,2:0.11111:deepvariant:7,0,40
- chr14 5363702 . A G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:17:14,3:0.17647:deepvariant:17,0,43
- chr14 5364102 . A C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:17,2:0.10526:deepvariant:4,0,37
- chr14 5364357 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:16,2:0.11111:deepvariant:3,0,38
- chr14 5364446 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:16,2:0.11111:deepvariant:0,0,30
- chr14 5364513 . T G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:17:15,2:0.11765:deepvariant:8,0,42
- chr14 5364614 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:16,2:0.11111:deepvariant:3,0,33
- chr14 5364736 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:18:16,2:0.11111:deepvariant:10,0,38
- chr14 5364908 . T C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:18:16,2:0.11111:deepvariant:6,0,38
- chr14 5364925 . C A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:17:14,3:0.17647:deepvariant:12,0,38
- chr14 5364998 . A T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:17:14,2:0.11765:deepvariant:9,0,34
- chr14 5364999 . T C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:16:14,2:0.12500:deepvariant:7,0,32
- chr14 5366205 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,4:0.22222:deepvariant:1,0,25
- chr14 5366288 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:13,4:0.22222:deepvariant:1,0,20
- chr14 5366485 . A G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:15:11,3:0.20000:small_model:8,0,38
- chr14 5366620 . T C 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:12:9,3:0.25000:small_model:12,0,38
- chr14 5366639 . C G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:9,3:0.25000:small_model:13,0,40
- chr14 5366697 . A C 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:12:9,3:0.25000:small_model:18,0,44
- chr14 5366804 . A T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:12:9,3:0.25000:small_model:18,0,45
- chr14 5366878 . T A 23.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:11:8,3:0.27273:small_model:23,0,47
- chr14 5366961 . G T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:8,3:0.27273:deepvariant:10,0,29
- chr14 5366984 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:9,3:0.25000:deepvariant:0,0,18
- chr14 5367066 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,24
- chr14 5367138 . C A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:7,3:0.30000:small_model:13,0,32
- chr14 5367166 . T G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:7,3:0.30000:small_model:11,0,35
- chr14 5367172 . A G 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:10:6,4:0.40000:small_model:15,0,33
- chr14 5367185 . T C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:10:7,3:0.30000:small_model:9,0,30
- chr14 5367366 . G C 26.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:27:8:6,2:0.25000:small_model:26,0,45
- chr14 5367410 . C A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:9:7,2:0.22222:small_model:15,0,37
- chr14 5367457 . G A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:9:7,2:0.22222:small_model:11,0,30
- chr14 5367476 . C T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:9:7,2:0.22222:small_model:13,0,32
- chr14 5367491 . A G 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:7,2:0.22222:small_model:15,0,34
- chr14 5367526 . G A 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:9:7,2:0.22222:small_model:16,0,36
- chr14 5367601 . A T 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:7,2:0.22222:small_model:16,0,35
- chr14 5367707 . T G 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:7,2:0.22222:small_model:15,0,36
- chr14 5367785 . C T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:9:6,2:0.22222:small_model:14,0,40
- chr14 5367919 . A G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:7,2:0.22222:small_model:10,0,29
- chr14 5367943 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:9:7,2:0.22222:small_model:10,0,32
- chr14 5368291 . A C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:7,2:0.22222:small_model:15,0,41
- chr14 5368629 . C A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:6,3:0.33333:deepvariant:4,0,24
- chr14 5368702 . C G 22.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:8:6,2:0.25000:small_model:22,0,41
- chr14 5368741 . G C 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:8:6,2:0.25000:small_model:18,0,40
- chr14 5368750 . A G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:8:6,2:0.25000:small_model:13,0,32
- chr14 5368816 . T C 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:8:6,2:0.25000:small_model:20,0,39
- chr14 5369034 . C T 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:7:4,3:0.42857:small_model:18,0,35
- chr14 5369066 . T G 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:7:5,2:0.28571:small_model:22,0,40
- chr14 5369073 . A T 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:5,2:0.28571:small_model:16,0,38
- chr14 5369100 . G A 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:7:5,2:0.28571:small_model:21,0,42
- chr14 5369113 . T C 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:5,2:0.28571:small_model:16,0,32
- chr14 5369143 . G A 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:4,3:0.42857:small_model:17,0,34
- chr14 5369224 . G T 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:7:5,2:0.28571:small_model:20,0,41
- chr14 5369231 . C T 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:7:5,2:0.28571:small_model:17,0,38
- chr14 5369284 . G C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:5,2:0.28571:small_model:17,0,37
- chr14 5369327 . G T 28.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:28:7:5,2:0.28571:small_model:28,0,47
- chr14 5369379 . G C 4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:7:4,3:0.42857:0,4,0
- chr14 5369406 . T C 27.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:28:7:5,2:0.28571:small_model:27,0,47
- chr14 5369443 . T G 29.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:29:7:5,2:0.28571:small_model:29,0,48
- chr14 5369560 . G C 22.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:7:5,2:0.28571:small_model:22,0,41
- chr14 5369582 . T G 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:7:5,2:0.28571:small_model:22,0,42
- chr14 5369719 . C A 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:7:5,2:0.28571:small_model:20,0,42
- chr14 5369725 . T G 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:7:5,2:0.28571:small_model:19,0,36
- chr14 5369776 . A G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:4,3:0.42857:small_model:17,0,35
- chr14 5369786 . G T 24.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:7:5,2:0.28571:small_model:24,0,41
- chr14 5370330 . G A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:8:6,2:0.25000:small_model:12,0,31
- chr14 5370352 . T A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:8:6,2:0.25000:deepvariant:4,0,21
- chr14 5370371 . T C 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:8:6,2:0.25000:deepvariant:8,0,25
- chr14 5370401 . A G 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:8:5,3:0.37500:small_model:18,0,42
- chr14 5370470 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:5,3:0.37500:small_model:10,0,32
- chr14 5370473 . T G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:small_model:9,0,28
- chr14 5370495 . G A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:small_model:9,0,28
- chr14 5370511 . T A 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:5,2:0.25000:small_model:9,0,28
- chr14 5370529 . C G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:8:6,2:0.25000:small_model:12,0,37
- chr14 5370558 . C G 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:8:6,2:0.25000:small_model:21,0,43
- chr14 5370691 . T G 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:7:5,2:0.28571:small_model:13,0,34
- chr14 5370723 . C T 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:7:5,2:0.28571:small_model:18,0,36
- chr14 5370736 . C T 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:7:5,2:0.28571:small_model:19,0,36
- chr14 5370805 . T C 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:7:5,2:0.28571:small_model:21,0,42
- chr14 5370824 . G T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:5,2:0.28571:small_model:11,0,31
- chr14 5370870 . G A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:7:4,2:0.28571:small_model:15,0,42
- chr14 5370910 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:7:5,2:0.28571:small_model:10,0,34
- chr14 5370924 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:5,2:0.28571:deepvariant:4,0,23
- chr14 5370953 . C A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:5,2:0.28571:small_model:12,0,34
- chr14 5370978 . C T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:4,2:0.28571:deepvariant:5,0,20
- chr14 5371001 . T G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:4,2:0.28571:small_model:11,0,30
- chr14 5371015 . T C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:4,2:0.28571:deepvariant:5,0,17
- chr14 5371028 . A G 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:7:5,2:0.28571:small_model:18,0,35
- chr14 5371179 . T G 25.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:7:5,2:0.28571:small_model:25,0,46
- chr14 5371211 . G A 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:4,2:0.28571:small_model:20,0,39
- chr14 5371251 . C G 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:8:6,2:0.25000:small_model:18,0,41
- chr14 5371288 . C T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:8:6,2:0.25000:deepvariant:4,0,22
- chr14 5371318 . T C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:small_model:9,0,37
- chr14 5371319 . G C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:deepvariant:9,0,26
- chr14 5371449 . T G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:5,2:0.28571:small_model:11,0,32
- chr14 5371502 . C A 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:5,2:0.28571:small_model:20,0,41
- chr14 5371514 . A G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:5,2:0.28571:small_model:17,0,34
- chr14 5371631 . G A 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:7:5,2:0.28571:small_model:24,0,45
- chr14 5371668 . T C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:7:4,2:0.28571:small_model:15,0,38
- chr14 5371672 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:2,0,23
- chr14 5371676 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:1,0,20
- chr14 5371747 . T C 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:7:5,2:0.28571:small_model:16,0,36
- chr14 5371749 . A C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:6:4,2:0.33333:small_model:14,0,30
- chr14 5371775 . G C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:7:5,2:0.28571:small_model:15,0,41
- chr14 5371794 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:2,0,21
- chr14 5371796 . A C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:7:5,2:0.28571:small_model:8,0,27
- chr14 5371818 . T C 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:5,2:0.28571:small_model:16,0,34
- chr14 5371869 . G A 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:7:4,2:0.28571:small_model:16,0,36
- chr14 5371880 . G C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:5,2:0.28571:small_model:11,0,29
- chr14 5371984 . A G 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:5,2:0.28571:small_model:17,0,38
- chr14 5371997 . G T 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:5,2:0.28571:small_model:12,0,33
- chr14 5372015 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:5,2:0.28571:small_model:11,0,35
- chr14 5372061 . C A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:7:5,2:0.28571:small_model:10,0,33
- chr14 5372071 . C T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:7:5,2:0.28571:small_model:15,0,39
- chr14 5372145 . C T 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:7:4,3:0.42857:small_model:23,0,36
- chr14 5372173 . T G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:7:5,2:0.28571:small_model:16,0,34
- chr14 5372176 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:7:5,2:0.28571:small_model:14,0,32
- chr14 5372203 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:7:5,2:0.28571:small_model:9,0,39
- chr14 5372265 . C T 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:9:7,2:0.22222:small_model:14,0,39
- chr14 5372305 . A G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:7,2:0.20000:small_model:12,0,35
- chr14 5372342 . C A 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:10:8,2:0.20000:small_model:18,0,44
- chr14 5372371 . C T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:8,2:0.20000:small_model:11,0,36
- chr14 5372417 . C A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:8,2:0.20000:small_model:13,0,44
- chr14 5372525 . T A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:9,2:0.18182:small_model:10,0,46
- chr14 5372596 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:13:11,2:0.15385:deepvariant:12,0,30
- chr14 5372643 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:11,2:0.15385:deepvariant:6,0,29
- chr14 5372849 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:11,2:0.15385:deepvariant:1,0,29
- chr14 5372888 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:13:11,2:0.15385:small_model:9,0,33
- chr14 5372990 . G A 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:14:11,2:0.14286:small_model:15,0,46
- chr14 5375235 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:9,2:0.18182:deepvariant:6,0,29
- chr14 5375318 . A G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:11:9,2:0.18182:small_model:13,0,47
- chr14 5636434 . T G 8.469 PASS H;FAU=0;FCU=0;FGU=4;FTU=6;RAU=0;RCU=0;RGU=3;RTU=6 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:19:0.3684:0,7:0:4:0,0:0:0:7:12:0:0:0:4
- chr14 5639626 . A T 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:19:12,7:0.36842:small_model:24,0,45
- chr14 5640551 . G T 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:19:14,5:0.26316:deepvariant:6,0,32
- chr14 6053923 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,23,0
- chr14 6055655 . A T 28.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:29:9:0,9:1.00000:small_model:28,54,0
- chr14 6550488 . G C 6.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:26:17,9:0.34615:5,10,0
- chr14 6716757 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:15,3:0.16667:deepvariant:0,0,15
- chr14 6986764 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:11,8:0.42105:deepvariant:1,0,15
- chr14 7341771 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:34:19,14:0.41177:deepvariant:5,0,19
- chr14 7342067 . G T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:34:19,15:0.44118:deepvariant:0,0,16
- chr14 7342081 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:34:20,13:0.38235:deepvariant:0,0,16
- chr14 7342993 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:12,8:0.40000:deepvariant:0,0,17
- chr14 7408056 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:24:9,15:0.62500:small_model:10,0,15
- chr14 7408090 . T G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:24:8,16:0.66667:small_model:13,0,14
- chr14 7408189 . G T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:15,9:0.37500:deepvariant:1,0,18
- chr14 7408243 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:24:15,9:0.37500:deepvariant:3,0,20
- chr14 7408412 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:25:16,9:0.36000:deepvariant:2,0,22
- chr14 7408830 . A G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:22:6,16:0.72727:deepvariant:6,0,18
- chr14 7408895 . G T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:13,11:0.45833:deepvariant:1,0,19
- chr14 7409505 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:25:15,10:0.40000:deepvariant:2,0,22
- chr14 7409910 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:23:14,9:0.39130:deepvariant:1,0,21
- chr14 7410240 . G A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:16:8,8:0.50000:deepvariant:5,0,19
- chr14 7410652 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:6,7:0.53846:deepvariant:3,0,19
- chr14 7535988 . G A 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:11,6:0.35294:deepvariant:0,0,20
- chr14 7537524 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:7,5:0.41667:deepvariant:4,0,21
- chr14 7581796 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:10,6:0.37500:deepvariant:3,0,22
- chr14 7581870 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,5:0.27778:deepvariant:1,0,20
- chr14 7581874 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,6:0.33333:deepvariant:2,0,21
- chr14 7582460 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:9,7:0.43750:deepvariant:4,0,20
- chr14 7582570 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:10,5:0.33333:deepvariant:0,0,21
- chr14 7582711 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,21
- chr14 8284525 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:13,3:0.18750:deepvariant:2,0,20
- chr14 8284780 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:13,3:0.18750:deepvariant:0,0,21
- chr14 8284853 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:12,3:0.20000:deepvariant:0,0,22
- chr14 8285038 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:12,3:0.20000:deepvariant:1,0,23
- chr14 8336515 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:35:21,14:0.40000:deepvariant:2,0,13
- chr14 8471418 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:18:12,6:0.33333:deepvariant:4,0,27
- chr14 8471957 . A G 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:17,17,0
- chr14 8472746 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:11,7:0.38889:deepvariant:0,0,24
- chr14 8473890 . G T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,25
- chr14 8473945 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,26
- chr14 8474017 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,27
- chr14 8931250 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:15,5:0.25000:deepvariant:1,0,18
- chr14 8931253 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:15,5:0.25000:deepvariant:3,0,19
- chr14 9277498 . A T 11.005 PASS H;FAU=4;FCU=0;FGU=0;FTU=5;RAU=4;RCU=0;RGU=0;RTU=6 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:19:0.5789:0,11:0:5:0,0:8:0:0:11:5:0:0:0
- chr14 9278798 . C A 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:18:5,13:0.72222:small_model:14,0,14
- chr14 9310489 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:38:24,14:0.36842:deepvariant:2,0,20
- chr14 9592162 . C A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:27:12,15:0.55556:deepvariant:10,0,9
- chr14 9592945 . C T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:27:14,13:0.48148:small_model:10,0,13
- chr14 9669825 . C G 14.317 PASS H;FAU=0;FCU=6;FGU=7;FTU=0;RAU=0;RCU=5;RGU=11;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:14:29:0.6207:0,18:0:5:0,0:0:11:18:0:0:5:0:0
- chr14 9813015 . G A 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:23:15,8:0.34783:deepvariant:8,0,16
- chr14 9983969 . G A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:21:13,8:0.38095:deepvariant:11,0,17
- chr14 10090195 . C T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:24:13,11:0.45833:deepvariant:7,0,19
- chr14 10096725 . A G 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:12,10:0.43478:deepvariant:6,0,8
- chr14 10096737 . G T 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:22:13,8:0.36364:deepvariant:7,0,16
- chr14 10096846 . C G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:22:13,9:0.40909:deepvariant:9,0,14
- chr14 11150406 . A G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,16,0
- chr14 11560596 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:3,2:0.40000:deepvariant:0,0,5
- chr14 11561533 . C G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,3:0.60000:deepvariant:3,6,0
- chr14 11577159 . C T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:2,5:0.71429:deepvariant:7,7,0
- chr14 11577267 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:2,3,0
- chr14 11776616 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,5:0.71429:deepvariant:3,17,0
- chr14 11874080 . T C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:38:18,20:0.52632:deepvariant:7,0,0
- chr14 12013534 . C T 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,27,0
- chr14 12024446 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,6,0
- chr14 12083456 . A G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:8,7,0
- chr14 12083632 . C G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,1,0
- chr14 12144134 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,4:0.50000:deepvariant:1,6,0
- chr14 12204922 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:3,4:0.57143:deepvariant:2,1,0
- chr14 12205654 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:3,4:0.57143:deepvariant:1,0,0
- chr14 12205957 . A G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:3,7:0.70000:deepvariant:4,0,0
- chr14 12206084 . G A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:3,7:0.70000:deepvariant:3,6,0
- chr14 12207213 . T C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:3,4:0.57143:deepvariant:5,0,4
- chr14 12263137 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:9,8:0.47059:deepvariant:3,0,6
- chr14 12367566 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:8,9,0
- chr14 12375068 . G A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:1,3:0.75000:deepvariant:0,0,0
- chr14 12572225 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:5,14,0
- chr14 12738752 . G A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,38,0
- chr14 12951323 . C T 13.359 PASS H;FAU=0;FCU=7;FGU=0;FTU=4;RAU=0;RCU=6;RGU=0;RTU=8 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:25:0.48:0,12:0:19:0,0:0:13:0:12:0:19:0:0
- chr14 14432676 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:3,5:0.38462:small_model:0,13,0
- chr14 14433059 . G A 34.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:28:8:0,8:1.00000:small_model:34,29,0
- chr14 14433109 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:2,13,0
- chr14 14433568 . C T 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,3:0.50000:deepvariant:5,35,0
- chr14 14433906 . C T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:8,10,0
- chr14 14507509 . A G 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:18,11,0
- chr14 14993001 . T C 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,19,0
- chr14 15014367 . C G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:24:16,6:0.25000:deepvariant:8,0,28
- chr14 15014369 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:17,5:0.20833:deepvariant:2,0,25
- chr14 16835804 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:15,2:0.11765:deepvariant:1,0,34
- chr14 24200937 . G T 11.5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:19:13,6:0.31579:8,1,0
- chr14 25130795 . T A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:3,6:0.37500:deepvariant:8,0,24
- chr14 30137252 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,7
- chr14 30137696 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:5,2:0.28571:small_model:12,0,32
- chr14 36081497 . T A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:16:12,3:0.18750:deepvariant:6,0,32
- chr14 40823942 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:8,2:0.20000:deepvariant:2,0,29
- chr14 65019661 . T C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr14 71031534 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:9,12,0
- chr14 73467222 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:3,9,0
- chr14 73467337 . A G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:15:10,5:0.33333:small_model:9,0,21
- chr14 82530921 . C G 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:17,5,0
- chr14 92397075 . A T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:12,3:0.20000:deepvariant:3,0,26
- chr14 95469525 . G A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:5:0,5:1.00000:deepvariant:9,0,5
- chr14 98447380 . T G 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:10:8,2:0.20000:small_model:22,0,48
- chr14 99523208 . G C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:2,3:0.60000:small_model:11,0,14
- chr14 99523254 . C T 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:5:2,3:0.60000:small_model:16,0,27
- chr14 99523261 . C G 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:5:2,3:0.60000:small_model:17,0,18
- chr14 99523307 . C T 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:19,11,0
- chr14 99523360 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:1,0,1
- chr14 99523367 . C G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:3:1,2:0.66667:deepvariant:7,0,7
- chr14 99523526 . G C 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:14,10,0
- chr14 99523539 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,12,0
- chr14 99725455 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:0,0,18
- chr14 99725473 . A G 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,4:0.36364:deepvariant:0,0,17
- chr14 99725491 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:8,4:0.33333:deepvariant:1,0,19
- chr14 99725544 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,5:0.41667:deepvariant:0,0,16
- chr14 99918820 . T C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:9,2:0.18182:small_model:11,0,37
- chr14 99918826 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:9,2:0.18182:small_model:11,0,34
- chr15 84389 . C A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:29:16,13:0.44828:deepvariant:8,0,26
- chr15 217143 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:30:15,15:0.50000:deepvariant:2,0,14
- chr15 217488 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:13,10:0.41667:deepvariant:0,0,16
- chr15 217591 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:11,10:0.47619:deepvariant:5,0,19
- chr15 217979 . A C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:8,11:0.57895:deepvariant:3,0,17
- chr15 218068 . G T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:8,11:0.57895:deepvariant:1,0,16
- chr15 432044 . C T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:5,16,0
- chr15 432364 . G T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,12,0
- chr15 432462 . C A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:10,11,0
- chr15 432682 . C A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,15,0
- chr15 432782 . T G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr15 433106 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,2,0
- chr15 535308 . G A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,20,0
- chr15 535628 . C G 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,18,0
- chr15 752575 . T A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:18:13,5:0.27778:deepvariant:4,0,15
- chr15 752672 . A C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,5:0.27778:deepvariant:0,0,12
- chr15 752854 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:12,4:0.23529:deepvariant:0,0,14
- chr15 752963 . G T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:12,4:0.25000:deepvariant:0,0,13
- chr15 788045 . A T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:1,4:0.80000:deepvariant:15,16,0
- chr15 1126738 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,17,0
- chr15 1164467 . G T 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:13:7,6:0.46154:deepvariant:9,0,13
- chr15 1341333 . T C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:15,17,0
- chr15 1341423 . A G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:13,15,0
- chr15 1341515 . A T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:10,19,0
- chr15 1341958 . T C 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:12,12,0
- chr15 1342030 . A T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:deepvariant:13,18,0
- chr15 1342068 . C A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:small_model:12,18,0
- chr15 1342090 . G C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:10,21,0
- chr15 1396805 . T A 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:9:3,6:0.66667:deepvariant:6,11,0
- chr15 1396930 . G T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:3:7:0,4:0.57143:deepvariant:12,39,0
- chr15 1449461 . G T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,20,0
- chr15 1449469 . A G 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:small_model:11,25,0
- chr15 1458659 . A T 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:10:0,9:0.90000:small_model:23,28,0
- chr15 1458720 . C A 26.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:10:0,10:1.00000:small_model:26,30,0
- chr15 1981133 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:70:29,41:0.58571:deepvariant:5,0,8
- chr15 1981390 . C T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:69:31,37:0.53623:deepvariant:8,0,10
- chr15 1981898 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:68:37,31:0.45588:deepvariant:1,0,14
- chr15 1982263 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:64:38,26:0.40625:deepvariant:2,0,14
- chr15 1983375 . G T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:54:33,21:0.38889:deepvariant:4,0,19
- chr15 1983587 . G C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:49:30,19:0.38776:deepvariant:4,0,19
- chr15 1983798 . G C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:48:27,18:0.37500:deepvariant:4,0,21
- chr15 1984065 . T C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:47:30,15:0.31915:deepvariant:2,0,20
- chr15 1984609 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:39:28,11:0.28205:deepvariant:1,0,20
- chr15 1984750 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:38:26,12:0.31579:deepvariant:2,0,19
- chr15 1985057 . G A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:37:25,10:0.27027:deepvariant:0,0,16
- chr15 1985271 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:35:26,9:0.25714:deepvariant:1,0,21
- chr15 1985620 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:31:23,7:0.22581:deepvariant:1,0,23
- chr15 1990702 . G A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:8,8:0.47059:deepvariant:1,0,5
- chr15 1991494 . T G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:21:8,13:0.61905:deepvariant:3,2,0
- chr15 1991853 . T C 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:21:6,15:0.71429:deepvariant:13,0,3
- chr15 1991911 . G T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:16,7:0.30435:deepvariant:0,0,13
- chr15 1992050 . G C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:24:13,11:0.45833:deepvariant:8,0,7
- chr15 2312853 . A G 10.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:39:11,28:0.71795:9,8,0
- chr15 2330182 . T A 7.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:47:28,19:0.40426:5,9,0
- chr15 2330374 . G T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:51:30,20:0.39216:small_model:17,0,33
- chr15 2330380 . A G 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:51:29,21:0.41177:small_model:15,0,33
- chr15 2331478 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:31:16,10:0.32258:deepvariant:2,0,19
- chr15 5191212 . T C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:7:5,2:0.28571:small_model:10,0,27
- chr15 5191313 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:7:5,2:0.28571:small_model:11,0,27
- chr15 5191576 . G T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:7,2:0.22222:deepvariant:4,0,17
- chr15 5191700 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,16
- chr15 5191707 . T G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:10,2:0.16667:deepvariant:1,0,19
- chr15 5964753 . A T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:3,2:0.40000:deepvariant:2,0,12
- chr15 5986335 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,4:0.66667:deepvariant:2,19,0
- chr15 5986357 . A C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:12,36,0
- chr15 6036613 . T A 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,24,0
- chr15 6042314 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:0,12,0
- chr15 6127624 . G C 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:20,27,0
- chr15 6128878 . T C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,31,0
- chr15 6128900 . C A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,21,0
- chr15 6128901 . G T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,22,0
- chr15 6246741 . T A 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,24,0
- chr15 6675629 . A C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,30,0
- chr15 6702800 . A C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,22,0
- chr15 6702803 . C G 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:18,32,0
- chr15 6702853 . A T 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:17,22,0
- chr15 6729372 . T C 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,2:0.66667:deepvariant:7,16,0
- chr15 6967402 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:5,7:0.58333:deepvariant:4,0,8
- chr15 7092642 . A C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,26,0
- chr15 7092643 . A C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:14,37,0
- chr15 7144248 . T G 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:4,5:0.55556:deepvariant:5,0,4
- chr15 7149527 . C T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:7,23,0
- chr15 7538124 . A C 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:0,3:0.37500:deepvariant:16,30,0
- chr15 7670242 . T C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:26:15,11:0.42308:deepvariant:3,0,12
- chr15 7687322 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,11,0
- chr15 7692731 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:2,10,0
- chr15 7852031 . C G 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:9:15:1,5:0.33333:deepvariant:22,29,9
- chr15 7859225 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,16,0
- chr15 8062193 . G C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,14,0
- chr15 8218337 . A C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,40,0
- chr15 8232228 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:24:14,10:0.41667:deepvariant:3,0,15
- chr15 8233276 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:8,7:0.46667:deepvariant:2,0,12
- chr15 8262521 . C T 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:11:4,6:0.54545:deepvariant:10,12,0
- chr15 8262597 . A T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:11:4,7:0.63636:deepvariant:7,10,0
- chr15 8277173 . A C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,22,0
- chr15 8278754 . G T 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:1,4:0.80000:deepvariant:16,19,0
- chr15 8293587 . T G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:2,5:0.71429:deepvariant:6,17,0
- chr15 8352351 . C T 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:1,6:0.85714:deepvariant:19,19,0
- chr15 8352427 . A T 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:8:1,6:0.75000:deepvariant:20,19,0
- chr15 8352467 . A T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:8:1,6:0.75000:deepvariant:15,18,0
- chr15 8352584 . T A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:8:2,6:0.75000:deepvariant:11,6,0
- chr15 8355647 . A C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:5,22,0
- chr15 8384110 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:5,4:0.44444:deepvariant:1,0,5
- chr15 8384363 . A T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:3,4:0.57143:deepvariant:4,0,3
- chr15 8540833 . T C 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:21,26,0
- chr15 8545653 . G C 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:4,0,1
- chr15 8629789 . A T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:1,3:0.75000:deepvariant:2,0,1
- chr15 8659408 . C A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,22,0
- chr15 8791441 . A C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,14,0
- chr15 8800515 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:26:12,14:0.53846:deepvariant:1,5,0
- chr15 8955987 . C T 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,13,0
- chr15 9099770 . C A 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,30,0
- chr15 9099776 . A T 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,26,0
- chr15 9104039 . A C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,21,0
- chr15 9108208 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:1,7:0.87500:deepvariant:4,10,0
- chr15 9117153 . G C 35.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:8:0,8:0.50000:deepvariant:35,46,11
- chr15 9184450 . A T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:3,6:0.66667:deepvariant:6,0,4
- chr15 9204404 . A C 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:4,30,0
- chr15 9212693 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:12,6:0.33333:deepvariant:0,0,12
- chr15 9289994 . A C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:8:2,6:0.75000:deepvariant:2,0,0
- chr15 9358557 . C A 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,19,0
- chr15 9358570 . T A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,17,0
- chr15 9358848 . G A 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,14,0
- chr15 9710752 . C A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,24,0
- chr15 9710753 . A G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,34,0
- chr15 9847863 . A C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,19,0
- chr15 9959554 . A C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:5,8,0
- chr15 10089598 . A C 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:2:0,2:1.00000:small_model:23,33,0
- chr15 10181803 . T G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,18,0
- chr15 10238469 . T G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:29:14,15:0.51724:deepvariant:0,0,2
- chr15 10241334 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:4,26,0
- chr15 10317280 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:2,15,0
- chr15 10317281 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,13,0
- chr15 10337427 . A C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,20,0
- chr15 10388284 . T A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:2,2:0.50000:deepvariant:3,11,0
- chr15 10388723 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:0,16,0
- chr15 10578264 . A C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:11,20,0
- chr15 10684768 . T C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,29,0
- chr15 10701736 . T A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:5,19,0
- chr15 10701834 . A G 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,4:0.80000:small_model:15,14,0
- chr15 10701886 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:8,12,0
- chr15 10702080 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:1,4:0.80000:small_model:9,19,0
- chr15 10702526 . T C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:1,4:0.80000:deepvariant:13,21,0
- chr15 10724609 . G C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:12,17,0
- chr15 10725118 . G C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,30,0
- chr15 10858682 . G C 26.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:0.40000:deepvariant:25,34,4
- chr15 11037181 . A C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,20,0
- chr15 11044374 . C A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:5,11,0
- chr15 11140251 . C T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:8,26,0
- chr15 11184207 . A C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,23,0
- chr15 11192079 . C T 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:11:0,11:1.00000:small_model:22,29,0
- chr15 11237200 . T C 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,24,0
- chr15 11240708 . G A 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:20,28,0
- chr15 11240718 . C G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:2,3:0.60000:deepvariant:4,14,0
- chr15 11240871 . A G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,3:0.75000:deepvariant:13,16,0
- chr15 11241255 . A G 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,3:0.75000:deepvariant:18,18,0
- chr15 11241388 . C G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:1,3:0.75000:deepvariant:13,15,0
- chr15 11241448 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,15,0
- chr15 11241479 . G C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,21,0
- chr15 11241488 . C G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,21,0
- chr15 11281149 . T C 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:3,23,0
- chr15 11766995 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,12,0
- chr15 11986142 . A T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,21,0
- chr15 11986148 . G C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,26,0
- chr15 11986182 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,12,0
- chr15 12053569 . C G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:3,4:0.57143:deepvariant:3,0,4
- chr15 12054151 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:8:3,5:0.62500:deepvariant:0,0,0
- chr15 12054268 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:3,6:0.66667:deepvariant:8,0,4
- chr15 12079213 . A C 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,20,0
- chr15 12084780 . G C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,17,0
- chr15 12144303 . A C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:3,26,0
- chr15 12224274 . C G 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:14,14,0
- chr15 12260321 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,16,0
- chr15 12468340 . A T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,14,0
- chr15 12468356 . A C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,17,0
- chr15 12474269 . T C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,29,0
- chr15 12512811 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:2,0,8
- chr15 12554188 . G C 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:7:0,7:1.00000:small_model:23,24,0
- chr15 12607045 . C A 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,24,0
- chr15 12607892 . G T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:17,17,0
- chr15 12618568 . C T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,20,0
- chr15 12618644 . A T 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,17,0
- chr15 12618684 . A T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr15 12638417 . A C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,5:0.71429:small_model:12,15,0
- chr15 12638446 . T C 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:8:0,7:0.87500:small_model:15,27,0
- chr15 12638787 . A C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:14,32,0
- chr15 12804617 . A C 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,27,0
- chr15 12853310 . G C 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,26,0
- chr15 12853344 . C A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,22,0
- chr15 12853360 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr15 13025705 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:2,2:0.50000:deepvariant:0,0,2
- chr15 13025790 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,13,0
- chr15 13035865 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:1,14,0
- chr15 13073815 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:2,17,0
- chr15 13113304 . C T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:4,5,0
- chr15 13115486 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,16,0
- chr15 13137267 . G C 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:13:0,12:0.46154:deepvariant:21,29,0
- chr15 13269662 . A C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:2,0,1
- chr15 13305115 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:6,5:0.41667:deepvariant:0,0,7
- chr15 13349454 . G T 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:20,26,0
- chr15 13591710 . G C 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:1,2:0.50000:deepvariant:7,20,0
- chr15 13592406 . A T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,3:0.75000:deepvariant:6,22,0
- chr15 13596160 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:4,4:0.50000:deepvariant:2,0,3
- chr15 13601190 . A T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:15,22,0
- chr15 13603146 . C G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,16,0
- chr15 13683984 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:3,2:0.40000:deepvariant:2,0,4
- chr15 13684451 . T A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:2,2:0.40000:deepvariant:1,0,5
- chr15 13813975 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,8,0
- chr15 13814007 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,14,0
- chr15 13814024 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,10,0
- chr15 13908583 . T C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:1,3:0.75000:small_model:13,26,0
- chr15 13908597 . G T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:13,24,0
- chr15 13936777 . A T 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:11,9,0
- chr15 14158832 . C G 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:3,12,0
- chr15 14265927 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr15 14265931 . T A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,20,0
- chr15 14265946 . T A 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:15,15,0
- chr15 14265949 . G C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,19,0
- chr15 14265960 . T A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,16,0
- chr15 14265965 . T C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,18,0
- chr15 14318431 . C A 18.53 PASS FAU=3;FCU=3;FGU=0;FTU=0;RAU=4;RCU=7;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:18:17:0.4118:0,7:0:11:0,0:7:10:0:0:0:11:0:0
- chr15 14424290 . T G 3.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:28:23,5:0.17857:0,21,0
- chr15 14424348 . G T 4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:28:23,5:0.17857:1,22,0
- chr15 14424433 . G T 5.4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:27:22,5:0.18519:3,28,0
- chr15 14424502 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:26:22,4:0.15385:deepvariant:9,0,41
- chr15 14424736 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:22:18,4:0.18182:1,25,0
- chr15 14425043 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:21:17,4:0.19048:2,21,0
- chr15 14425100 . A T 5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:21:17,4:0.19048:3,25,0
- chr15 14425262 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:20:16,4:0.20000:0,24,0
- chr15 14736049 . A C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:7,16,0
- chr15 14736051 . G T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,14,0
- chr15 14736067 . A T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,19,0
- chr15 14736070 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,15,0
- chr15 14736079 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,18,0
- chr15 14736082 . A T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,19,0
- chr15 14736092 . A T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,19,0
- chr15 14736256 . C T 23.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:23,20,0
- chr15 14736275 . T G 23.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:23,23,0
- chr15 14739972 . C T 5.6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:20:15,5:0.25000:4,26,0
- chr15 15341138 . G C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:29:21,7:0.24138:small_model:11,0,39
- chr15 15420293 . G T 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:19,23,0
- chr15 15522545 . T C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:16,20,0
- chr15 15827039 . G A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:20:15,5:0.25000:small_model:15,0,41
- chr15 15827217 . A G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:21:17,4:0.19048:small_model:14,0,48
- chr15 15868942 . C T 18.623 PASS H;FAU=0;FCU=6;FGU=0;FTU=4;RAU=0;RCU=9;RGU=0;RTU=4 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:18:23:0.3478:0,8:0:16:0,0:0:15:0:8:0:16:0:0
- chr15 16022242 . C T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:1,3:0.75000:deepvariant:13,13,0
- chr15 16022522 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,15,0
- chr15 16022531 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,14,0
- chr15 16033576 . C A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:2,6:0.75000:deepvariant:7,4,0
- chr15 16334312 . A T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:1,2:0.66667:deepvariant:8,12,0
- chr15 16680872 . G A 24.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:10:6,4:0.40000:small_model:24,0,45
- chr15 16680936 . T C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:6,4:0.40000:small_model:9,0,25
- chr15 17016417 . A C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,21,0
- chr15 17016544 . A G 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,27,0
- chr15 17649156 . C T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:4,4,0
- chr15 17649833 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:0,7,0
- chr15 19276898 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:16,3:0.15789:deepvariant:0,0,20
- chr15 19277987 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:12,2:0.14286:deepvariant:2,0,19
- chr15 19331897 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:32:19,13:0.40625:deepvariant:1,0,17
- chr15 23497840 . C T 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:4,9:0.69231:deepvariant:12,0,8
- chr15 23498110 . G T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:10,3:0.15789:deepvariant:9,3,27
- chr15 23498220 . G T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,3:0.23077:deepvariant:3,0,2
- chr15 23498383 . G T 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:15:5,3:0.20000:deepvariant:17,10,14
- chr15 23498440 . T C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:10,5:0.33333:deepvariant:5,0,17
- chr15 25049000 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,8,0
- chr15 25130094 . T A 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:3,4:0.57143:small_model:23,0,21
- chr15 26909590 . A T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:4,3:0.37500:small_model:10,0,25
- chr15 26909656 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:8:5,3:0.37500:small_model:11,0,30
- chr15 27740332 . T C 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:17:12,5:0.29412:small_model:15,0,36
- chr15 34095838 . A G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,18,0
- chr15 34095891 . T C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:1,4:0.80000:deepvariant:0,2,0
- chr15 34095913 . T C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:3,1,0
- chr15 34095920 . C T 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:5:1,4:0.80000:small_model:17,0,13
- chr15 34095955 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:10,14,0
- chr15 40364110 . T C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:25:12,13:0.16000:deepvariant:4,3,46
- chr15 43889697 . C T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:13:2:0,2:1.00000:small_model:0,19,24
- chr15 53615965 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:6,2:0.25000:small_model:11,0,32
- chr15 57441879 . T C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:4:0,4:1.00000:small_model:0,33,18
- chr15 58152047 . C G 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:12:7,4:0.33333:small_model:18,0,39
- chr15 58152978 . A G 35.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:35,18,0
- chr15 75329704 . G A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,14,0
- chr15 80916228 . T C 29.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/.:4:14:4,3:0.21429:deepvariant:27,15,36
- chr15 87098625 . G A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:14:11,3:0.21429:small_model:8,0,36
- chr15 87098655 . T C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:15:12,3:0.20000:small_model:13,0,39
- chr15 98474928 . A G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:11,11,0
- chr15 98474971 . A G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:9,7,0
- chr15 98537867 . G A 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:5,5,0
- chr15 99299890 . T G 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:0,4:0.50000:deepvariant:21,20,0
- chr16 455339 . C T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:3,2:0.40000:small_model:9,0,30
- chr16 456463 . C G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:14:11,3:0.21429:deepvariant:6,0,20
- chr16 456464 . C T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:14:11,3:0.21429:deepvariant:7,0,21
- chr16 491765 . G A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:11:8,3:0.27273:deepvariant:7,0,30
- chr16 491827 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,26
- chr16 491858 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:8,3:0.27273:small_model:8,0,34
- chr16 495483 . G C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:11,3:0.21429:deepvariant:4,0,26
- chr16 495524 . G C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:10,3:0.23077:deepvariant:3,0,25
- chr16 495860 . T A 14.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:15:12:7,4:0.33333:14,25,0
- chr16 495966 . T G 9.3 PASS . GT:GQ:DP:AD:VAF:PL 1/1:9:12:7,5:0.41667:8,22,0
- chr16 966092 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,14,0
- chr16 966128 . C T 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:8,15,0
- chr16 966134 . C A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,12,0
- chr16 966146 . T G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,7,0
- chr16 966166 . A G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,16,0
- chr16 966207 . C A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:4:2,2:0.50000:small_model:10,0,15
- chr16 966219 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:2,2:0.50000:deepvariant:0,0,0
- chr16 966227 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:1,3:0.75000:deepvariant:8,0,1
- chr16 966228 . A G 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:deepvariant:19,15,0
- chr16 966248 . G A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:17,14,0
- chr16 966312 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,10,0
- chr16 1199627 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:1,4:0.80000:deepvariant:1,1,0
- chr16 1906609 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:1,7,0
- chr16 1906632 . A T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:12,16,0
- chr16 1906634 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:deepvariant:11,18,0
- chr16 1906640 . C T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:12,17,0
- chr16 1906651 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,16,0
- chr16 1906670 . T C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,15,0
- chr16 1906672 . T C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:6,20,0
- chr16 1906673 . G A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:9,19,0
- chr16 1906681 . G A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,18,0
- chr16 1906690 . G A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,18,0
- chr16 1906695 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,17,0
- chr16 1906698 . C T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,19,0
- chr16 1906734 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr16 1906741 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr16 1906752 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,17,0
- chr16 1907775 . C T 28.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:27:10:0,10:1.00000:small_model:28,32,0
- chr16 1907786 . A G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:11:1,10:0.90909:deepvariant:7,8,0
- chr16 1907807 . A G 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:11:0,11:1.00000:small_model:18,37,0
- chr16 1907813 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:11:0,11:1.00000:deepvariant:5,15,0
- chr16 1907814 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:11:0,11:1.00000:small_model:9,25,0
- chr16 1907818 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:11:1,10:0.90909:deepvariant:5,14,0
- chr16 1907822 . C T 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:11:0,10:0.90909:small_model:13,21,0
- chr16 1907830 . A G 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:11:0,11:1.00000:deepvariant:6,16,0
- chr16 1907836 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:1,10:0.90909:deepvariant:1,7,0
- chr16 1907841 . A T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:11:0,11:1.00000:small_model:16,33,0
- chr16 2807627 . C T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:14,11,0
- chr16 4124788 . T C 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:1,6:0.25000:deepvariant:19,10,87
- chr16 4486414 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr16 4486424 . G T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,19,0
- chr16 4486436 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr16 4486447 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr16 4486455 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr16 8511328 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,11,0
- chr16 12153505 . A G 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:15:9,4:0.26667:small_model:20,0,46
- chr16 12153543 . T C 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:12:9,3:0.25000:small_model:20,0,45
- chr16 21580053 . G C 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:24:15,9:0.37500:deepvariant:7,0,16
- chr16 27415975 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:6:3,2:0.33333:small_model:11,0,21
- chr16 27416011 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:11,9,0
- chr16 27416128 . A G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:2,4:0.66667:deepvariant:3,0,2
- chr16 27416164 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:2,6,0
- chr16 27416254 . A G 27.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:6:2,4:0.66667:small_model:27,0,27
- chr16 27416272 . A G 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:6:2,4:0.66667:small_model:22,0,20
- chr16 27416332 . A G 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:7:3,4:0.57143:small_model:14,0,16
- chr16 27416344 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,2:0.28571:deepvariant:1,0,10
- chr16 27416347 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:3,3,0
- chr16 27416422 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,2:0.50000:deepvariant:2,5,0
- chr16 27416548 . A G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:5,6,0
- chr16 27416704 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:2,0,5
- chr16 27416740 . A G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:12,5,0
- chr16 27416986 . A G 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:4,3:0.42857:small_model:20,0,27
- chr16 27417022 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL ./1:4:6:0,3:0.50000:deepvariant:7,7,11
- chr16 27417106 . A G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:7:5,2:0.28571:small_model:9,0,45
- chr16 27417208 . A G 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:8:3,5:0.62500:small_model:25,0,19
- chr16 27417598 . A G 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,2:0.66667:small_model:20,9,0
- chr16 27417640 . A G 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:1,4:0.80000:small_model:24,0,13
- chr16 27417712 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:5:3,2:0.40000:small_model:11,0,21
- chr16 29546074 . G T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:5,8,0
- chr16 29546180 . G T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:11,6,0
- chr16 29546198 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:1,6,0
- chr16 32694706 . G T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:1,0,18
- chr16 33944820 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:6,2:0.25000:small_model:11,0,35
- chr16 33944824 . A G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:8:6,2:0.25000:small_model:10,0,34
- chr16 33949283 . G A 15.233 PASS FAU=5;FCU=0;FGU=1;FTU=0;RAU=5;RCU=0;RGU=1;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:15:12:0.8333:0,10:0:9:0,0:10:0:2:0:0:0:9:0
- chr16 35878062 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:1,0,10
- chr16 35878288 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:7,3:0.30000:deepvariant:3,0,11
- chr16 37017661 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:4,4:0.50000:deepvariant:4,2,0
- chr16 37386075 . C G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:20:6,14:0.70000:deepvariant:11,6,0
- chr16 37387726 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:3,10:0.76923:deepvariant:2,4,0
- chr16 37486429 . A G 22.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:0,3:0.42857:deepvariant:21,37,0
- chr16 37795531 . C G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:30:21,7:0.23333:deepvariant:9,0,13
- chr16 37817404 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:14,6:0.30000:deepvariant:1,0,16
- chr16 39578709 . T G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:21:16,5:0.23810:deepvariant:9,0,18
- chr16 39578873 . T C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:21:16,5:0.23810:deepvariant:9,0,20
- chr16 39578959 . T G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:15,5:0.25000:deepvariant:5,0,22
- chr16 39623740 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:9:4,5:0.55556:deepvariant:9,0,9
- chr16 39829825 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:15,3:0.16667:deepvariant:1,0,17
- chr16 40182180 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:10,4:0.28571:deepvariant:2,0,16
- chr16 40182783 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:13,4:0.23529:deepvariant:0,0,17
- chr16 40206044 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:0,0,5
- chr16 40267980 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:7,2:0.22222:deepvariant:0,0,17
- chr16 40268193 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:6,3:0.33333:deepvariant:3,0,17
- chr16 40270215 . G A 48.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:15:0,15:0.20000:deepvariant:48,48,38
- chr16 40493770 . T G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:38:19,18:0.47368:deepvariant:5,0,13
- chr16 40493818 . C A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:36:20,16:0.44444:deepvariant:3,0,14
- chr16 40494113 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:35:18,11:0.31429:deepvariant:1,0,17
- chr16 40507648 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:1,3:0.75000:small_model:11,33,0
- chr16 40699665 . C A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:9,3:0.23077:deepvariant:3,0,15
- chr16 40827683 . A T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:1,0,11
- chr16 40909004 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:2,17,0
- chr16 40909005 . T C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:12,32,0
- chr16 40971796 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:14,5:0.26316:deepvariant:3,0,12
- chr16 40972322 . T G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:16,6:0.27273:deepvariant:1,0,16
- chr16 40972433 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:17,6:0.25000:deepvariant:1,0,17
- chr16 40973992 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:26:16,10:0.38462:deepvariant:0,0,10
- chr16 40974377 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:25:16,9:0.36000:deepvariant:6,0,16
- chr16 40974491 . C G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:24:16,8:0.33333:deepvariant:5,0,16
- chr16 41033128 . A C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,42,0
- chr16 41804314 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:11,4:0.26667:deepvariant:0,0,15
- chr16 41804776 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:13,4:0.23529:deepvariant:1,0,14
- chr16 41805263 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:14,5:0.26316:deepvariant:1,0,15
- chr16 42304629 . G C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:4,3:0.42857:deepvariant:5,0,7
- chr16 42440478 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:0,0,11
- chr16 42770782 . G A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:2,0,5
- chr16 42910515 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:2,0,3
- chr16 42995099 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:2,0,12
- chr16 42996267 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:4,3:0.37500:deepvariant:2,0,8
- chr16 43119412 . G A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,15,0
- chr16 43246250 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:4,5:0.55556:deepvariant:4,0,6
- chr16 44104029 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:2,0,7
- chr16 44407551 . G C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,8
- chr16 45232257 . A C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,29,0
- chr16 45417161 . C T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:3,3:0.50000:deepvariant:5,0,6
- chr16 46601157 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:8:3,4:0.50000:deepvariant:8,0,6
- chr16 46601761 . A G 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:1,3:0.60000:deepvariant:5,0,1
- chr16 47181690 . C A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:3,3:0.50000:deepvariant:4,0,8
- chr16 47668730 . G C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:3,2:0.40000:deepvariant:3,10,0
- chr16 48138375 . T C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,30,0
- chr16 48463941 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:9,5:0.35714:deepvariant:0,0,12
- chr16 48474630 . C T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:8,4:0.33333:deepvariant:4,0,11
- chr16 48475930 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,3:0.23077:deepvariant:2,0,15
- chr16 48480364 . G C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:2,3:0.60000:deepvariant:4,0,2
- chr16 48481975 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:2,0,10
- chr16 48482131 . A T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:3,0,12
- chr16 48759745 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:13,2:0.13333:deepvariant:0,0,13
- chr16 48809817 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,14
- chr16 49389271 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:33:19,14:0.42424:deepvariant:2,0,19
- chr16 49389372 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:34:19,15:0.44118:deepvariant:2,0,20
- chr16 49390094 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:28:18,10:0.35714:deepvariant:0,0,20
- chr16 49390165 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:16,10:0.38462:deepvariant:2,0,20
- chr16 49390410 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:25:15,10:0.40000:deepvariant:1,0,19
- chr16 49390639 . A C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:15,9:0.37500:deepvariant:0,0,17
- chr16 49394938 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:25:20,5:0.20000:deepvariant:3,0,18
- chr16 49395217 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:25:18,7:0.28000:deepvariant:5,0,16
- chr16 49395281 . A C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:24:19,5:0.20833:deepvariant:3,0,19
- chr16 49395395 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:25:20,5:0.20000:deepvariant:1,0,18
- chr16 49395415 . A C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:18,7:0.28000:deepvariant:0,0,17
- chr16 49395521 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:20,5:0.20000:deepvariant:0,0,15
- chr16 49395784 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:22,4:0.15385:deepvariant:1,0,17
- chr16 49520835 . T A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,20,0
- chr16 49678662 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:12,3:0.20000:deepvariant:2,0,13
- chr16 49679168 . C A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:12,3:0.20000:deepvariant:1,0,10
- chr16 49679303 . G C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:10,5:0.33333:deepvariant:5,0,11
- chr16 49679592 . T G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:9,5:0.31250:small_model:1,0,7
- chr16 49780810 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:22:18,4:0.18182:deepvariant:0,0,18
- chr16 49798669 . T A 28 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:10:0,10:1.00000:small_model:27,31,0
- chr16 49821616 . G C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:7,4:0.36364:deepvariant:3,0,11
- chr16 49976365 . G T 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:3,11:0.73333:deepvariant:13,0,3
- chr16 50078692 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,4:0.36364:deepvariant:1,0,7
- chr16 50078701 . G T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:2,0,7
- chr16 50078950 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:4,4:0.50000:deepvariant:2,0,4
- chr16 50078958 . A T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:4,4:0.50000:deepvariant:3,0,3
- chr16 50079009 . T A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:3,0,7
- chr16 50079034 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:0,0,5
- chr16 50119082 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:12,6:0.33333:deepvariant:4,0,11
- chr16 50158045 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,6
- chr16 50158887 . T G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:4,3:0.42857:deepvariant:4,0,11
- chr16 50159178 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:1,0,8
- chr16 50159284 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:2,0,8
- chr16 50160011 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:1,13,0
- chr16 50352806 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:24:18,6:0.25000:deepvariant:4,0,20
- chr16 50352861 . T G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:24:18,6:0.25000:deepvariant:4,0,20
- chr16 50353127 . A T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:26:20,6:0.23077:deepvariant:5,0,22
- chr16 50353189 . A T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:20,6:0.23077:deepvariant:1,0,20
- chr16 50432507 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:5,6:0.54545:deepvariant:3,0,9
- chr16 50434453 . G A 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:10:0,10:1.00000:small_model:22,34,0
- chr16 50565901 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:6,2:0.25000:deepvariant:1,0,8
- chr16 50566072 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:1,0,11
- chr16 50566251 . G A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:5,2:0.28571:deepvariant:5,0,13
- chr16 50567972 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:7,2:0.22222:deepvariant:2,0,12
- chr16 50568029 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:7,2:0.22222:deepvariant:1,0,12
- chr16 50569139 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:10,2:0.16667:deepvariant:0,0,15
- chr16 50610885 . A C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,21,0
- chr16 50685388 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:12,6:0.33333:deepvariant:0,0,13
- chr16 50714468 . T G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:7,4:0.36364:deepvariant:5,0,7
- chr16 50714510 . T G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:12:7,5:0.41667:deepvariant:0,0,4
- chr16 50714524 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:8,4:0.33333:deepvariant:5,0,7
- chr16 50714633 . T C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:7,5:0.41667:deepvariant:4,0,9
- chr16 50714634 . G T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:7,5:0.41667:deepvariant:4,0,10
- chr16 50714803 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:12:7,5:0.41667:deepvariant:8,0,11
- chr16 50714804 . G T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:7,5:0.41667:deepvariant:6,0,9
- chr16 50715205 . A T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:15:9,6:0.40000:deepvariant:6,0,14
- chr16 50715206 . A T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:9,6:0.40000:deepvariant:5,0,15
- chr16 50850048 . T A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:16:2,14:0.87500:deepvariant:14,1,0
- chr16 50887943 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:12,3:0.20000:deepvariant:0,0,17
- chr16 51198115 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:14,5:0.26316:deepvariant:0,0,15
- chr16 51208777 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:19,6:0.24000:deepvariant:0,0,21
- chr16 51209840 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:14,6:0.30000:deepvariant:1,0,19
- chr16 51209966 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,6:0.33333:deepvariant:1,0,20
- chr16 51209969 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,6:0.33333:deepvariant:0,0,20
- chr16 51210045 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:13,4:0.23529:deepvariant:1,0,18
- chr16 51210305 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,4:0.22222:deepvariant:1,0,16
- chr16 51210818 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,4:0.30769:deepvariant:0,0,15
- chr16 51210837 . G T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:8,5:0.38462:deepvariant:1,0,14
- chr16 51295135 . G T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,18,0
- chr16 51315698 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:2,0,13
- chr16 51315847 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:2,0,12
- chr16 51442996 . G A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,34,0
- chr16 51582360 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:37:27,10:0.27027:deepvariant:0,0,14
- chr16 51582585 . C A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:35:21,13:0.37143:deepvariant:3,0,13
- chr16 51582918 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:31:24,7:0.22581:deepvariant:1,0,19
- chr16 51838215 . C T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:7,5:0.41667:deepvariant:5,0,9
- chr16 51838434 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:7,5:0.41667:deepvariant:3,0,5
- chr16 51839702 . G C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:6,6:0.50000:deepvariant:7,0,9
- chr16 51989141 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:15,4:0.21053:deepvariant:3,0,14
- chr16 51990011 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:13,2:0.13333:deepvariant:0,0,13
- chr16 52427735 . A C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:4:2,2:0.50000:small_model:2,0,26
- chr16 54730086 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:18:16,2:0.11111:deepvariant:9,0,37
- chr16 54730106 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:18:16,2:0.11111:deepvariant:4,0,36
- chr16 56605832 . A C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:12:7,3:0.25000:small_model:12,0,36
- chr16 75927183 . G C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:0,0,17
- chr16 75927215 . T C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:6:4,2:0.33333:small_model:10,0,31
- chr16 77242470 . T G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:7,4:0.33333:deepvariant:4,0,23
- chr16 86258475 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,19
- chr16 87828648 . G C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:5,2:0.28571:small_model:12,0,31
- chr16 87828659 . A G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:7:5,2:0.28571:small_model:8,0,27
- chr16 90997068 . A G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:12:8,4:0.33333:small_model:8,0,26
- chr16 91472848 . T C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:6:3,3:0.50000:small_model:11,0,14
- chr16 91473926 . G A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:4,2:0.33333:deepvariant:4,0,8
- chr16 91718421 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:9:4,5:0.55556:deepvariant:0,2,0
- chr16 92752547 . A G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:16:10,6:0.37500:small_model:8,0,24
- chr16 94682647 . C G 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:6:0,6:1.00000:small_model:24,23,0
- chr16 94682758 . G C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:small_model:10,17,0
- chr16 94682763 . G A 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:1,5:0.83333:small_model:19,12,0
- chr16 94736337 . C T 11.707 PASS H;FAU=0;FCU=3;FGU=0;FTU=3;RAU=0;RCU=7;RGU=0;RTU=4 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:17:0.4118:0,7:0:6:0,0:0:10:0:7:0:6:0:0
- chr16 94736451 . C T 24.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:18:10,8:0.44444:small_model:24,0,40
- chr16 94736527 . C T 9.415 PASS H;FAU=0;FCU=3;FGU=0;FTU=3;RAU=0;RCU=8;RGU=0;RTU=4 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:18:0.3889:0,7:0:6:0,0:0:11:0:7:0:6:0:0
- chr16 94736603 . C T 11.425 PASS H;FAU=0;FCU=3;FGU=0;FTU=3;RAU=0;RCU=8;RGU=0;RTU=4 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:18:0.3889:0,7:0:6:0,0:0:11:0:7:0:6:0:0
- chr16 94896276 . G A 22.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:3:1,2:0.66667:small_model:22,0,23
- chr17 30263 . T C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:14,11,0
- chr17 31553 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:8,2:0.18182:deepvariant:3,0,13
- chr17 31641 . C T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:11:8,3:0.27273:deepvariant:7,0,14
- chr17 32914 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:2,11,0
- chr17 32928 . G T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:1,5:0.83333:deepvariant:6,15,0
- chr17 32947 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:1,2:0.66667:deepvariant:11,9,0
- chr17 33113 . T C 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:22:15,6:0.27273:deepvariant:8,0,28
- chr17 278354 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:1,0,20
- chr17 634190 . A G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:12:9,3:0.25000:small_model:12,0,36
- chr17 634295 . T C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:7,5:0.41667:small_model:13,0,31
- chr17 634325 . A G 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:13:10,3:0.23077:small_model:17,0,42
- chr17 634334 . A G 25.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:11:8,3:0.27273:small_model:25,0,48
- chr17 834791 . C G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:4,4:0.50000:small_model:11,0,15
- chr17 835305 . T G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:0,0,23
- chr17 1046038 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:4:2,2:0.50000:small_model:11,0,18
- chr17 1052326 . T C 11.63 PASS FAU=0;FCU=3;FGU=0;FTU=6;RAU=0;RCU=1;RGU=0;RTU=7 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:17:0.2353:0,4:0:12:0,0:0:4:0:13:0:0:0:12
- chr17 1628318 . G C 40.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:29:0,7:0.24138:deepvariant:40,46,25
- chr17 2242516 . G C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:15:11,4:0.26667:deepvariant:9,0,10
- chr17 5134460 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:1,3:0.75000:deepvariant:0,0,3
- chr17 5134469 . T G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:1,3:0.75000:deepvariant:0,0,0
- chr17 5134510 . G T 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:5,4:0.44444:small_model:16,0,36
- chr17 5134515 . T A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:5,4:0.44444:small_model:12,0,23
- chr17 5134519 . C T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:5,4:0.44444:small_model:12,0,25
- chr17 5134542 . T C 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:25:10:4,5:0.50000:small_model:25,0,36
- chr17 5134582 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:7,2:0.22222:deepvariant:2,0,12
- chr17 5134597 . A T 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:9:0,9:1.00000:small_model:15,22,0
- chr17 5134601 . T C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:9:0,9:1.00000:small_model:9,21,0
- chr17 5134625 . C T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:10:5,5:0.50000:deepvariant:6,0,10
- chr17 5134639 . A T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:5,5:0.50000:deepvariant:4,0,10
- chr17 5134643 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:5,5:0.50000:deepvariant:3,0,9
- chr17 6088581 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:5,6:0.42857:deepvariant:2,0,10
- chr17 6088965 . G T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:11:4,6:0.54545:deepvariant:1,1,0
- chr17 6089175 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:7,7:0.43750:deepvariant:2,0,5
- chr17 6089180 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:9,7:0.43750:deepvariant:2,0,7
- chr17 6089235 . G A 23.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:11:0,11:0.27273:deepvariant:23,26,10
- chr17 6090084 . G T 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:11:1,2:0.18182:deepvariant:17,25,13
- chr17 6090770 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:2,13,0
- chr17 6090780 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,3:0.75000:deepvariant:0,8,0
- chr17 6091569 . A G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:6:4,2:0.33333:small_model:13,0,29
- chr17 7450544 . A G 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:14,13,0
- chr17 10789915 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:13,4:0.22222:deepvariant:2,0,24
- chr17 14613625 . C T 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:3:1,2:0.66667:small_model:10,0,11
- chr17 22128288 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:6,2:0.25000:deepvariant:1,0,8
- chr17 22399930 . C T 12.171 PASS H;FAU=0;FCU=3;FGU=0;FTU=6;RAU=0;RCU=5;RGU=0;RTU=10 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:12:24:0.6667:0,16:0:4:0,0:0:8:0:16:0:4:0:0
- chr17 22463147 . C T 19.916 PASS H;FAU=0;FCU=10;FGU=0;FTU=4;RAU=0;RCU=7;RGU=0;RTU=6 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:19:27:0.3704:0,10:0:18:0,0:0:17:0:10:0:18:0:0
- chr17 22636408 . G A 12.796 PASS H;FAU=1;FCU=0;FGU=8;FTU=0;RAU=6;RCU=0;RGU=10;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:12:25:0.28:0,7:0:15:0,0:7:0:18:0:0:0:15:0
- chr17 23623316 . C G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,7,0
- chr17 23682721 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:13,3:0.18750:deepvariant:0,0,16
- chr17 23781961 . T C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:10:6,4:0.40000:small_model:11,0,16
- chr17 23782123 . T C 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:11:7,4:0.36364:small_model:12,0,16
- chr17 23782171 . A T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:7,4:0.36364:small_model:13,0,17
- chr17 24169721 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:12,7:0.36842:deepvariant:0,0,11
- chr17 24169942 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:8,9:0.52941:deepvariant:0,0,4
- chr17 24170908 . C G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:7,11:0.61111:deepvariant:4,0,4
- chr17 24170958 . T G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:7,11:0.61111:deepvariant:5,0,4
- chr17 24274216 . C A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:4,7:0.63636:deepvariant:1,0,5
- chr17 24274479 . A C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:4,7:0.58333:deepvariant:3,0,1
- chr17 24473583 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:12,3:0.20000:deepvariant:0,0,16
- chr17 24473907 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:10,3:0.23077:deepvariant:1,0,15
- chr17 24474141 . A T 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:14:9,5:0.35714:deepvariant:7,0,10
- chr17 24474811 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:9,2:0.18182:deepvariant:1,0,13
- chr17 26809409 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,3:0.42857:deepvariant:0,4,0
- chr17 27141962 . T G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:0,0,6
- chr17 27205763 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:3,7:0.70000:deepvariant:3,7,0
- chr17 27206726 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:4,4:0.50000:deepvariant:1,0,4
- chr17 27207056 . T G 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:4,5:0.55556:deepvariant:5,0,7
- chr17 27207497 . T A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:9:4,5:0.55556:deepvariant:8,0,10
- chr17 27207705 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,5:0.55556:deepvariant:1,0,6
- chr17 27208077 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:12:0,8:0.66667:small_model:9,19,0
- chr17 27209686 . C G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:11:4,7:0.63636:deepvariant:1,0,0
- chr17 27215073 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,17,0
- chr17 27325942 . G A 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:1,7:0.87500:deepvariant:10,0,0
- chr17 27327104 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,15
- chr17 27327209 . G T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:1,0,13
- chr17 27370734 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:11,3:0.21429:deepvariant:0,0,15
- chr17 27370940 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:11,3:0.21429:deepvariant:1,0,16
- chr17 27375116 . G T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:11,8:0.42105:deepvariant:7,0,12
- chr17 27381994 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:20,5:0.20000:deepvariant:0,0,18
- chr17 27382830 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:16,4:0.20000:deepvariant:1,0,19
- chr17 27390095 . A C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:2,0,7
- chr17 27420659 . A C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:11,5:0.29412:deepvariant:6,0,19
- chr17 27434097 . A C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,15,0
- chr17 29602017 . A G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:10:3:0,3:1.00000:small_model:0,22,8
- chr17 44205962 . G A 38.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:7:0,7:1.00000:small_model:38,22,0
- chr17 44205994 . C T 35.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:35,20,0
- chr17 44206029 . T C 30 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:6:0,6:1.00000:small_model:29,23,0
- chr17 44206049 . C T 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:19,19,0
- chr17 44206095 . T C 23.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:23,18,0
- chr17 44206111 . C T 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:18,19,0
- chr17 44206116 . C T 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:14,20,0
- chr17 44206235 . G A 39.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:6:0,6:1.00000:small_model:39,22,0
- chr17 44206281 . C T 33 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:32,19,0
- chr17 44206465 . A G 35.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:5:0,5:1.00000:small_model:35,23,0
- chr17 44206481 . T C 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:19,17,0
- chr17 44206491 . C G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:16,17,0
- chr17 44206516 . A G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:13,16,0
- chr17 44206519 . C G 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:deepvariant:18,18,0
- chr17 44206531 . C A 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:17,17,0
- chr17 44206557 . A C 34.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:4:0,4:1.00000:small_model:34,21,0
- chr17 44206585 . G C 29.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:29,22,0
- chr17 44206593 . G C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:13,16,0
- chr17 44206613 . G T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:17,20,0
- chr17 44206650 . G A 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:16,17,0
- chr17 44206670 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,15,0
- chr17 44206678 . G A 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,16,0
- chr17 44206690 . A G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,18,0
- chr17 44206696 . G T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,19,0
- chr17 44206704 . A C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,19,0
- chr17 44206715 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,17,0
- chr17 44206716 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr17 44206720 . A G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr17 44206725 . A C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,18,0
- chr17 44206732 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,19,0
- chr17 44206735 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr17 44260499 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:8,3,0
- chr17 44260609 . G A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:3:1,2:0.66667:deepvariant:0,0,0
- chr17 44260658 . A G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:11,10,0
- chr17 52785082 . G T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:6,13,0
- chr17 53503558 . C G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:18:10,6:0.33333:small_model:13,0,40
- chr17 58007245 . C T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,10,0
- chr17 58007320 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,13,0
- chr17 60911408 . C T 21.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:13:10,3:0.23077:deepvariant:21,0,36
- chr17 68948152 . C T 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:20:10,8:0.40000:small_model:17,0,32
- chr17 68948339 . T A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:22:11,10:0.45454:deepvariant:13,0,24
- chr17 68948347 . C A 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:22:11,11:0.50000:deepvariant:13,0,25
- chr17 68948356 . G T 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:22:12,10:0.45454:small_model:18,0,28
- chr17 68948402 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:12,7:0.36842:deepvariant:2,0,24
- chr17 68948420 . T C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:12,7:0.36842:deepvariant:4,0,27
- chr17 68948442 . C A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:15,7:0.31818:deepvariant:2,0,18
- chr17 78378683 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:12,7:0.35000:deepvariant:3,0,15
- chr17 78675095 . A C 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:8:2,6:0.75000:small_model:14,16,0
- chr17 78675152 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:2,5:0.62500:deepvariant:0,8,0
- chr17 78675163 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:2,6:0.75000:deepvariant:2,7,0
- chr17 78675182 . C G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:0,6:0.85714:deepvariant:3,14,0
- chr17 78675190 . A C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:deepvariant:10,15,0
- chr17 78675211 . C A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,6:0.85714:deepvariant:11,15,0
- chr17 78675220 . C G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,6:1.00000:small_model:10,13,0
- chr17 78675228 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:deepvariant:11,14,0
- chr17 78675242 . T C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:0,6:1.00000:deepvariant:5,11,0
- chr17 80379191 . A C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:265:24,204:0.76981:small_model:9,36,0
- chr17 80379643 . A C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:204:22,149:0.73039:small_model:15,25,0
- chr17 80379955 . G C 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:86:15,67:0.77907:small_model:20,52,0
- chr17 80379975 . G C 63.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:64:83:14,58:0.69880:small_model:64,99,0
- chr17 80451577 . T C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:7,2:0.22222:small_model:9,0,98
- chr17 81006899 . C G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:14:5:0,5:1.00000:small_model:0,20,1
- chr17 81217556 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr17 81217567 . A G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,14,0
- chr17 81645858 . T C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:12:10,2:0.16667:small_model:15,0,43
- chr17 81648306 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:9,3:0.25000:small_model:9,0,35
- chr17 81648324 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:9,3:0.25000:deepvariant:3,0,13
- chr17 81650098 . A T 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:8,2:0.20000:small_model:8,0,34
- chr17 81650110 . T G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:8,2:0.20000:deepvariant:4,0,25
- chr17 81650178 . T C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:12:10,2:0.16667:small_model:11,0,42
- chr17 81781454 . T G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,16,0
- chr17 81781483 . C T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,16,0
- chr17 81904199 . A G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:4,9,0
- chr17 83455336 . T A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:2:17:3,5:0.29412:deepvariant:7,16,1
- chr17 83834723 . T C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:5,25,0
- chr17 83903623 . C A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,18,0
- chr17 83903648 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,17,0
- chr17 83991837 . G T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:4,5:0.55556:deepvariant:2,3,0
- chr17 83994845 . C A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:8,14,0
- chr17 83994906 . G C 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:20,14,0
- chr17 83994987 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,16,0
- chr17 83994990 . A G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,19,0
- chr17 83995008 . T C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,18,0
- chr17 83995009 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr17 83995029 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,18,0
- chr17 83995091 . G A 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:20,10,0
- chr17 83995155 . C T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:14,9,0
- chr17 83995171 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr17 83995174 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,19,0
- chr17 83995192 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,20,0
- chr17 83995193 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr17 83995202 . G A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,22,0
- chr17 83995234 . T C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:12,17,0
- chr17 83995276 . A G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:11,18,0
- chr17 83995294 . A G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,17,0
- chr17 83995297 . A G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:12,18,0
- chr17 83995339 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr17 83996627 . A G 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:20,25,0
- chr17 84003916 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr17 84158333 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:0,0,3
- chr17 84158334 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:3:1,2:0.66667:deepvariant:0,0,3
- chr17 84158385 . G T 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:3:1,2:0.66667:small_model:19,0,26
- chr18 666962 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:5:2,3:0.60000:small_model:10,0,15
- chr18 4672346 . A G 22.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:12:7,4:0.33333:small_model:22,0,25
- chr18 9199320 . G A 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:9,3:0.25000:deepvariant:4,0,26
- chr18 13143428 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:7,3:0.30000:deepvariant:4,0,34
- chr18 15092895 . C G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:7:2,5:0.71429:small_model:10,0,13
- chr18 15092921 . A C 26.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:7:0,7:1.00000:small_model:26,23,0
- chr18 15092980 . C G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:6,0,0
- chr18 15774056 . T G 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:15:10,5:0.33333:small_model:16,0,26
- chr18 15774178 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,4:0.30769:deepvariant:0,0,16
- chr18 15774185 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:9,4:0.30769:deepvariant:3,0,20
- chr18 15774243 . A G 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:9,4:0.30769:deepvariant:7,0,22
- chr18 15774304 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,4:0.30769:deepvariant:1,0,14
- chr18 15774419 . T G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:13:9,4:0.30769:small_model:12,0,19
- chr18 15774560 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:11,3:0.21429:deepvariant:1,0,18
- chr18 15793822 . C T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:12:9,3:0.25000:small_model:10,0,33
- chr18 15793836 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:9,3:0.25000:deepvariant:3,0,25
- chr18 15793864 . A C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:9,3:0.25000:small_model:14,0,33
- chr18 15793912 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:9,2:0.18182:small_model:11,0,36
- chr18 15793932 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:11:9,2:0.18182:small_model:8,0,33
- chr18 15793961 . T A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:11:9,2:0.18182:deepvariant:8,0,29
- chr18 15794037 . G A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:11:9,2:0.18182:small_model:8,0,31
- chr18 15794045 . G T 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:12:8,3:0.25000:deepvariant:7,0,31
- chr18 15794083 . G A 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:12:10,2:0.16667:small_model:12,0,58
- chr18 15794109 . C T 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:11:9,2:0.18182:small_model:16,0,98
- chr18 15973830 . A C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:10,7:0.41177:deepvariant:2,0,9
- chr18 15973847 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:17:10,7:0.41177:small_model:10,0,26
- chr18 15973857 . C T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:17:10,7:0.41177:small_model:10,0,26
- chr18 16137457 . C T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:small_model:10,15,0
- chr18 16137498 . C T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,16,0
- chr18 16137552 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,18,0
- chr18 16137569 . T G 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:18,28,0
- chr18 16137604 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:2,3:0.60000:deepvariant:3,17,0
- chr18 16137723 . C A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,19,0
- chr18 16137748 . A C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,19,0
- chr18 16137763 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,19,0
- chr18 16137765 . C A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,20,0
- chr18 16137799 . C T 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:13,14,0
- chr18 16204571 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:10,3:0.20000:small_model:1,0,24
- chr18 16204656 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:9,4:0.26667:small_model:0,0,18
- chr18 16302816 . C A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:13,3:0.18750:deepvariant:0,0,15
- chr18 16314102 . A C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:16,14,0
- chr18 16314253 . A C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:4,0,5
- chr18 16339108 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,5:0.27778:deepvariant:1,0,12
- chr18 16343420 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:15:7,8:0.53333:deepvariant:7,2,0
- chr18 16346413 . A T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:4,5:0.55556:deepvariant:2,0,6
- chr18 16346487 . C A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:4,4:0.50000:deepvariant:4,0,10
- chr18 16347030 . G A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:3,0,11
- chr18 16347135 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:9:5,4:0.44444:deepvariant:6,0,14
- chr18 16347227 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:5,4:0.44444:deepvariant:4,0,10
- chr18 16347307 . A G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:9:5,4:0.44444:deepvariant:7,0,13
- chr18 16347367 . C G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:5,4:0.44444:deepvariant:6,0,13
- chr18 16347427 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:5,4:0.44444:deepvariant:0,0,6
- chr18 16347643 . C A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,11
- chr18 16347651 . C G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,11
- chr18 16347785 . A T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:7,5:0.41667:deepvariant:4,0,12
- chr18 16347847 . C G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:7,5:0.41667:deepvariant:5,0,13
- chr18 16347926 . G T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:7,5:0.41667:deepvariant:3,0,13
- chr18 16348084 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:8,5:0.38462:deepvariant:0,0,13
- chr18 16348087 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:8,5:0.38462:deepvariant:0,0,11
- chr18 16348245 . A C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:14:7,7:0.50000:deepvariant:1,0,1
- chr18 16348879 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:10,9:0.47368:deepvariant:3,0,12
- chr18 16348881 . C A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:10,9:0.47368:deepvariant:0,0,10
- chr18 16349305 . C G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:8,7:0.43750:deepvariant:4,0,18
- chr18 16353036 . T G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:9,7:0.43750:deepvariant:2,0,12
- chr18 16380426 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:8,5:0.35714:deepvariant:1,0,13
- chr18 16380516 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:8,5:0.38462:deepvariant:0,0,11
- chr18 16403102 . C A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr18 16546224 . G T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,18,0
- chr18 16546228 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,19,0
- chr18 16546247 . A G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,19,0
- chr18 16546257 . G T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,25,0
- chr18 16546258 . A G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,27,0
- chr18 16546261 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:2,19,0
- chr18 16546563 . T C 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:15,17,0
- chr18 16546711 . G T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:13,13,0
- chr18 16546761 . T G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:15,17,0
- chr18 16546762 . C A 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:20,22,0
- chr18 16546873 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr18 16546879 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,18,0
- chr18 16639214 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:14,10:0.41667:deepvariant:0,0,10
- chr18 16644307 . G C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:2,4,0
- chr18 16676495 . C A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:17:11,6:0.35294:deepvariant:7,0,17
- chr18 16676632 . C T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:18:11,7:0.38889:deepvariant:7,0,13
- chr18 17231170 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:6,3:0.33333:deepvariant:0,0,8
- chr18 17231585 . A T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:5,4:0.44444:deepvariant:2,0,8
- chr18 17239620 . G C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,5:0.27778:deepvariant:0,0,15
- chr18 17358143 . G C 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:2,3:0.60000:deepvariant:8,19,0
- chr18 17390195 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:6,7:0.53846:deepvariant:0,0,6
- chr18 17472893 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:0,0,11
- chr18 17635895 . T A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:23:14,9:0.39130:deepvariant:2,0,18
- chr18 17746754 . T A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:8,4:0.33333:deepvariant:4,0,12
- chr18 17747263 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,4:0.30769:deepvariant:0,0,12
- chr18 17747789 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,4:0.30769:deepvariant:0,0,11
- chr18 17758417 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:39:31,8:0.20513:deepvariant:2,0,16
- chr18 17758585 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:42:32,10:0.23810:deepvariant:0,0,13
- chr18 19855403 . A C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:7,8:0.53333:deepvariant:5,0,9
- chr18 19855639 . T C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:15:7,8:0.53333:deepvariant:8,0,12
- chr18 19890807 . G A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:3,0,1
- chr18 19911898 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:12,5:0.29412:deepvariant:0,0,13
- chr18 19932855 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:12,6:0.33333:deepvariant:0,0,11
- chr18 19932907 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,6:0.33333:deepvariant:2,0,11
- chr18 20051884 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:6,7:0.53846:deepvariant:3,0,9
- chr18 20108191 . T A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:10,6:0.37500:deepvariant:2,0,8
- chr18 20108194 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:10,5:0.31250:deepvariant:1,0,9
- chr18 20109983 . A G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:2,4:0.50000:deepvariant:5,0,4
- chr18 20121233 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:2,0,12
- chr18 20121429 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:9,3:0.25000:deepvariant:0,0,14
- chr18 20152064 . T G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:5,4:0.44444:deepvariant:3,0,3
- chr18 20152277 . C G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:6,2:0.25000:deepvariant:1,0,9
- chr18 20152334 . G C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:6,2:0.25000:deepvariant:4,0,16
- chr18 20211188 . G A 28.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:28,17,0
- chr18 20512091 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:20,4:0.16667:deepvariant:0,0,16
- chr18 20565944 . C G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:4,7:0.63636:deepvariant:6,2,0
- chr18 20567824 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:3,5:0.62500:deepvariant:1,8,0
- chr18 20611321 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:37:21,16:0.43243:deepvariant:0,0,5
- chr18 20705325 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:22,3:0.12000:deepvariant:0,0,18
- chr18 20744759 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:12,5:0.29412:deepvariant:2,0,14
- chr18 20744995 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:12,5:0.29412:deepvariant:0,0,13
- chr18 20745273 . T A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:17:7,6:0.35294:deepvariant:5,0,16
- chr18 20745274 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:11,5:0.29412:deepvariant:3,0,15
- chr18 20753203 . A T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:28:18,10:0.35714:deepvariant:6,0,15
- chr18 20904885 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:30:22,8:0.26667:deepvariant:0,0,19
- chr18 20918514 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:26:18,7:0.26923:deepvariant:0,0,13
- chr18 20918624 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:26:19,7:0.26923:deepvariant:0,0,12
- chr18 20983080 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:1,0,22
- chr18 20983195 . A T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:8,4:0.33333:deepvariant:2,0,22
- chr18 20989634 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:12,2:0.14286:deepvariant:0,0,18
- chr18 20989901 . C G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:12,2:0.14286:deepvariant:1,0,16
- chr18 20991095 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:17,3:0.15000:deepvariant:0,0,18
- chr18 26000598 . C T 27.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:27:17:10,7:0.41177:small_model:27,0,40
- chr18 30681501 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:6:26:2,5:0.19231:deepvariant:9,22,7
- chr18 47592800 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,12
- chr18 47592812 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:1,0,15
- chr18 47592848 . T C 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:7:4,3:0.42857:small_model:14,0,24
- chr18 50011536 . A G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:10,14,0
- chr18 50011576 . C T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:14,15,0
- chr18 57226695 . A G 8.499 PASS H;FAU=6;FCU=0;FGU=2;FTU=0;RAU=4;RCU=0;RGU=5;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:17:0.4118:0,7:0:17:0,0:10:0:7:0:17:0:0:0
- chr18 57226715 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:6,6:0.42857:deepvariant:0,0,8
- chr18 57226902 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:18:14,4:0.22222:0,17,0
- chr18 58751178 . T C 25.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:12:3:0,3:1.00000:small_model:0,24,12
- chr18 59612091 . C T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:11:2:0,2:1.00000:small_model:0,91,70
- chr18 59612106 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:3:2:0,2:1.00000:deepvariant:0,92,73
- chr18 59612118 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:5:2:0,2:1.00000:deepvariant:0,93,72
- chr18 59612121 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:4:2:0,2:1.00000:deepvariant:0,90,72
- chr18 59612142 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:5:2:0,2:1.00000:deepvariant:0,92,72
- chr18 59675729 . A T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:20:16,4:0.20000:small_model:9,0,39
- chr18 62174570 . C T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:8:5,3:0.37500:small_model:16,0,31
- chr18 68301597 . A G 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:13:8,5:0.38462:small_model:12,0,25
- chr18 74425923 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,8,0
- chr18 74427003 . C T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr18 74428380 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:2,2:0.50000:deepvariant:2,0,0
- chr18 74430081 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,8,0
- chr18 74430646 . A G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:5,8,0
- chr18 76587142 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,9,0
- chr18 78746299 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:0,0,21
- chr18 78746318 . T C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:10:5,5:0.50000:deepvariant:6,0,20
- chr18 79113821 . C T 21.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:17:11,6:0.35294:small_model:21,0,44
- chr18 79113822 . G A 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:17:12,5:0.29412:small_model:15,0,38
- chr18 79249551 . G T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:22:16,5:0.22727:small_model:14,0,42
- chr18 79450782 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:12,5:0.29412:deepvariant:1,0,13
- chr18 79611717 . T C 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:7:5,2:0.28571:small_model:12,0,32
- chr18 79877697 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:4,2:0.33333:deepvariant:2,0,10
- chr18 79877702 . A C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:6:4,2:0.33333:deepvariant:5,0,10
- chr18 79877833 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:4,2:0.33333:deepvariant:2,0,3
- chr18 79878593 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,15
- chr18 80106263 . T G 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:7,20,0
- chr18 80162402 . A G 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:5:2,3:0.60000:small_model:17,0,22
- chr18 80162405 . G A 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:5:2,3:0.60000:small_model:12,0,25
- chr18 80162408 . A G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:2,3:0.60000:small_model:13,0,28
- chr18 80228531 . A C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:19,16,0
- chr18 80228641 . A C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,13,0
- chr18 80229026 . G A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,13,0
- chr19 433805 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr19 433806 . T G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,21,0
- chr19 433869 . A G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,13,0
- chr19 478310 . G T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:2,2:0.50000:deepvariant:2,0,4
- chr19 556345 . T C 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:10:5,5:0.50000:small_model:19,0,31
- chr19 556505 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,3:0.30000:deepvariant:0,0,18
- chr19 556538 . C T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:7,3:0.30000:deepvariant:14,0,30
- chr19 556604 . T C 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:3,6:0.33333:deepvariant:6,5,23
- chr19 770878 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,15,0
- chr19 770893 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,12,0
- chr19 790604 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,13,0
- chr19 790625 . G A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,18,0
- chr19 1012898 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:9,6:0.40000:deepvariant:0,0,10
- chr19 1014010 . T G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:1,2:0.22222:deepvariant:10,13,11
- chr19 1740183 . A G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:3:1,2:0.66667:small_model:9,0,20
- chr19 1931713 . C G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:16,10,0
- chr19 1931745 . A G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:12,12,0
- chr19 1931768 . T C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:14,17,0
- chr19 1931789 . C G 23.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:23,11,0
- chr19 1931821 . A G 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:16,18,0
- chr19 1931827 . C G 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:14,19,0
- chr19 1931830 . A G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:13,14,0
- chr19 1931844 . T C 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,17,0
- chr19 1931847 . G C 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:deepvariant:12,19,0
- chr19 1931868 . G A 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,19,0
- chr19 1931873 . C T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,18,0
- chr19 1931920 . T C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,17,0
- chr19 1931923 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,6,0
- chr19 2265833 . A T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:7,3,0
- chr19 3210862 . G A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:10:2:0,2:1.00000:small_model:0,17,9
- chr19 3210870 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:3:2:0,2:1.00000:deepvariant:0,24,12
- chr19 3310740 . T C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:18:13,5:0.27778:small_model:13,0,13
- chr19 4495394 . G A 13.586 PASS H;FAU=7;FCU=0;FGU=0;FTU=0;RAU=4;RCU=0;RGU=1;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:12:0.9167:0,11:0:13:0,0:11:0:1:0:0:0:13:0
- chr19 5783552 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:7,3:0.30000:deepvariant:1,0,25
- chr19 6983111 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:12:9,2:0.16667:small_model:11,0,46
- chr19 8173380 . T C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:5:3,2:0.40000:small_model:10,0,41
- chr19 9054483 . T G 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:15:6:0,6:1.00000:small_model:0,15,3
- chr19 11552121 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:7:1,4:0.57143:deepvariant:0,4,0
- chr19 11552189 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,2:0.40000:deepvariant:3,11,0
- chr19 11552227 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,3:0.60000:deepvariant:4,16,0
- chr19 14723437 . C T 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:21:16,5:0.23810:small_model:13,0,43
- chr19 15838203 . A G 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:10,15,0
- chr19 16062934 . A C 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:12:0,11:0.25000:deepvariant:21,25,11
- chr19 16063152 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:10,6:0.37500:deepvariant:0,0,6
- chr19 16066154 . C G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,5:0.71429:deepvariant:5,9,0
- chr19 16066172 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:1,5:0.71429:deepvariant:6,12,0
- chr19 16066174 . C G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:5,12,0
- chr19 16066190 . C T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:1,5:0.71429:deepvariant:6,12,0
- chr19 16066192 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:1,6:0.85714:deepvariant:11,19,0
- chr19 16066194 . C G 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:1,5:0.71429:deepvariant:5,10,0
- chr19 16066210 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:2,13,0
- chr19 16066212 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:0,6:0.85714:deepvariant:6,14,0
- chr19 16066214 . C G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,5:0.83333:deepvariant:4,12,0
- chr19 16066232 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:2,10,0
- chr19 16066234 . C G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,5:0.71429:deepvariant:4,12,0
- chr19 16066252 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:10:5,5:0.50000:deepvariant:1,12,0
- chr19 16066254 . C G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:5,11,0
- chr19 16066492 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:16:5,11:0.68750:deepvariant:3,7,0
- chr19 16066494 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:16:6,10:0.37500:deepvariant:0,5,4
- chr19 16066534 . G C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:16:10,6:0.37500:deepvariant:9,0,13
- chr19 16067310 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:1,9:0.81818:deepvariant:0,7,0
- chr19 16067330 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:2,8:0.72727:deepvariant:1,9,0
- chr19 16067410 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:4,8:0.66667:deepvariant:0,0,7
- chr19 24592590 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:10,6:0.37500:deepvariant:2,0,21
- chr19 24699706 . A G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:9,4:0.30769:deepvariant:5,0,12
- chr19 24699719 . T A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:8,5:0.38462:deepvariant:8,0,16
- chr19 24699798 . G C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,4:0.30769:deepvariant:4,0,14
- chr19 24699981 . T A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:8,3:0.25000:deepvariant:5,0,18
- chr19 24700086 . A C 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:7,5:0.41667:small_model:12,0,13
- chr19 24700278 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,10
- chr19 24700347 . G C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:8,2:0.18182:deepvariant:4,0,14
- chr19 24700389 . G T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:3,0,11
- chr19 24700408 . T G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:3,0,11
- chr19 24700473 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:8,5:0.38462:deepvariant:0,0,5
- chr19 24700496 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:8,5:0.38462:deepvariant:0,0,6
- chr19 24700522 . T C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:13:6,6:0.46154:deepvariant:8,0,9
- chr19 24700596 . A C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:2,0,12
- chr19 24700647 . T G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:5,5:0.50000:deepvariant:4,0,4
- chr19 24700719 . A T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:5,5:0.50000:deepvariant:1,0,3
- chr19 24700727 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:10:5,5:0.50000:deepvariant:0,0,3
- chr19 24700768 . A C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:5,5:0.50000:deepvariant:1,3,0
- chr19 24700786 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:3,7:0.70000:deepvariant:7,0,4
- chr19 24700866 . C A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:3,4:0.44444:deepvariant:5,0,9
- chr19 24701019 . T C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:5,5:0.45454:deepvariant:6,0,8
- chr19 24701079 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:6,5:0.45454:deepvariant:0,6,0
- chr19 24701081 . G C 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:11:0,11:1.00000:small_model:18,19,0
- chr19 24701120 . T A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:11:0,11:1.00000:small_model:13,15,0
- chr19 24701148 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:5,6:0.54545:deepvariant:0,5,0
- chr19 24701166 . A G 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:11:0,11:1.00000:small_model:18,18,0
- chr19 24701197 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,8
- chr19 24701230 . C T 26.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:11:0,11:1.00000:small_model:26,14,0
- chr19 24701259 . A G 26 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:11:0,11:1.00000:small_model:25,16,0
- chr19 24701386 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:13:5,8:0.61538:deepvariant:2,4,0
- chr19 24702378 . A C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:13:7,6:0.46154:deepvariant:0,0,3
- chr19 24703411 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:12,7:0.36842:deepvariant:2,0,15
- chr19 25311979 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:5,3:0.37500:deepvariant:0,0,11
- chr19 25840711 . G C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:3,0,7
- chr19 25840780 . G A 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:10:6,4:0.40000:deepvariant:6,0,13
- chr19 25840932 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:2,0,9
- chr19 25889726 . G A 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:29:7,12:0.41379:deepvariant:17,6,0
- chr19 25895747 . G A 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:4:15:7,3:0.20000:deepvariant:5,4,18
- chr19 25900262 . G C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:4,13,0
- chr19 25900331 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:3,3:0.50000:deepvariant:1,13,0
- chr19 25900367 . G T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,11,0
- chr19 25900440 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,12,0
- chr19 25900453 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,14,0
- chr19 25900470 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,14,0
- chr19 25900481 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,12,0
- chr19 25900536 . A T 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:5:5:1,2:0.40000:deepvariant:6,31,5
- chr19 25900536 . A G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,2:0.40000:deepvariant:6,26,0
- chr19 25900551 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:4,12,0
- chr19 25900563 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:3,10,0
- chr19 25900577 . G T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,12,0
- chr19 25901064 . A G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:3:5:1,2:0.40000:deepvariant:3,16,1
- chr19 25901319 . G A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,3:0.75000:deepvariant:4,14,0
- chr19 25901447 . A T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:5,13,0
- chr19 25901977 . C A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,19,0
- chr19 25901987 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,19,0
- chr19 25901988 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr19 25902019 . T A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,20,0
- chr19 25902023 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,19,0
- chr19 25902031 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,18,0
- chr19 25903047 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,10,0
- chr19 25903333 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,9,0
- chr19 25903476 . A T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:7:1,6:0.85714:deepvariant:8,13,0
- chr19 25903520 . A G 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:1,6:0.85714:deepvariant:11,17,0
- chr19 26045437 . A C 25.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,3:0.60000:deepvariant:24,40,0
- chr19 26084777 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,18,0
- chr19 26084812 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,14,0
- chr19 26084944 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,13,0
- chr19 26085070 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,10,0
- chr19 26085350 . C T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,10,0
- chr19 26085509 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,14,0
- chr19 26143657 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,10
- chr19 26413057 . C T 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:7:1,6:0.85714:small_model:13,27,0
- chr19 26442761 . T A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,18,0
- chr19 26442815 . C T 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,24,0
- chr19 26442910 . C A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,24,0
- chr19 26443137 . T A 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,21,0
- chr19 26443315 . C A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,16,0
- chr19 26443326 . C T 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,16,0
- chr19 26443582 . G C 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,17,0
- chr19 26443590 . C A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,21,0
- chr19 26443695 . C A 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,18,0
- chr19 26645631 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,13,0
- chr19 26695574 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,2:0.50000:deepvariant:0,13,0
- chr19 27011977 . C G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,9,0
- chr19 27012453 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,18,0
- chr19 27012661 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,14,0
- chr19 27012751 . G A 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:2:0,2:1.00000:small_model:20,34,0
- chr19 27013001 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,13,0
- chr19 27222441 . A C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,25,0
- chr19 27222452 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr19 27222489 . A C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,21,0
- chr19 27609330 . C A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,18,0
- chr19 27750172 . A T 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:21,18,0
- chr19 27828338 . A T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:11,6:0.35294:deepvariant:4,0,17
- chr19 28047099 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:1,11,0
- chr19 28208293 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,5:0.41667:deepvariant:1,0,5
- chr19 28208328 . T C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:7,5:0.41667:deepvariant:3,0,6
- chr19 28299984 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:28:15,13:0.46429:deepvariant:2,0,8
- chr19 28388750 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:9,7:0.43750:deepvariant:0,0,14
- chr19 28448803 . A C 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:7:1,6:0.85714:deepvariant:11,11,0
- chr19 28448811 . C A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:7:1,6:0.85714:deepvariant:11,11,0
- chr19 28448865 . A C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:1,6:0.85714:deepvariant:11,8,0
- chr19 28459848 . G C 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:7,7:0.50000:deepvariant:6,0,1
- chr19 28670762 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:2,4:0.66667:deepvariant:4,12,0
- chr19 28670766 . A T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:small_model:11,15,0
- chr19 28670784 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,10,0
- chr19 28670792 . T G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:3,3:0.50000:deepvariant:0,10,0
- chr19 28670802 . A C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:9,20,0
- chr19 28670808 . G T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:2,11,0
- chr19 28670834 . G T 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:21,19,0
- chr19 28670883 . A C 29.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:6:0,6:1.00000:small_model:29,23,0
- chr19 28670886 . A T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:3,3:0.50000:deepvariant:4,10,0
- chr19 28670916 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:11,16,0
- chr19 28670940 . T G 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:6:0,6:1.00000:small_model:25,21,0
- chr19 28692026 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:22:17,5:0.22727:deepvariant:1,0,17
- chr19 28700931 . G T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:15,8:0.34783:deepvariant:0,0,15
- chr19 28701196 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:16,8:0.33333:deepvariant:1,0,16
- chr19 28701292 . G C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:16,8:0.33333:deepvariant:0,0,14
- chr19 28702994 . G T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:16,8:0.33333:deepvariant:2,0,16
- chr19 28777009 . A T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:4,0,6
- chr19 28777011 . G T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:3,0,6
- chr19 28820843 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:9,4:0.30769:deepvariant:1,0,16
- chr19 28822431 . A C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:1,3:0.75000:deepvariant:2,0,5
- chr19 28822478 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,8,0
- chr19 28864380 . G T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:10,7:0.41177:deepvariant:6,0,14
- chr19 28869725 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:31:19,12:0.38710:deepvariant:9,0,8
- chr19 28869802 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:31:19,12:0.38710:deepvariant:8,0,3
- chr19 28932574 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:2,6:0.75000:small_model:9,21,0
- chr19 28932746 . G A 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:2,6:0.75000:deepvariant:4,0,0
- chr19 28932891 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:2,6:0.75000:deepvariant:2,15,0
- chr19 28936306 . C G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:14,6:0.30000:deepvariant:1,0,15
- chr19 28943286 . T A 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:19,23,0
- chr19 28943300 . C G 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,4:0.80000:deepvariant:7,18,0
- chr19 28943305 . G A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:8,19,0
- chr19 28962536 . C A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:6,6:0.50000:deepvariant:3,3,0
- chr19 28972236 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:3,6:0.66667:deepvariant:0,5,0
- chr19 28972328 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:3,6:0.66667:deepvariant:1,11,0
- chr19 28972508 . C T 15.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:0,6:0.85714:deepvariant:15,13,0
- chr19 28972870 . A C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,4:0.80000:deepvariant:6,6,0
- chr19 28972875 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:5:1,4:0.80000:deepvariant:3,0,1
- chr19 29101960 . T A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:16:10,6:0.37500:deepvariant:8,0,22
- chr19 29115025 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:0,10,0
- chr19 29199424 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:5,4:0.44444:deepvariant:0,0,4
- chr19 29220687 . G T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:5,6:0.54545:deepvariant:3,0,10
- chr19 29220691 . A G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:5,6:0.54545:deepvariant:3,0,9
- chr19 29220748 . C G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:6,5:0.45454:deepvariant:4,0,9
- chr19 29265746 . T G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:13,7:0.35000:deepvariant:5,0,17
- chr19 29269381 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:10,3:0.23077:deepvariant:0,0,18
- chr19 29273752 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:11,8:0.42105:deepvariant:1,0,7
- chr19 29274543 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:15,3:0.16667:deepvariant:0,0,16
- chr19 29348800 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,17
- chr19 29360839 . G T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:12,7:0.36842:deepvariant:6,0,13
- chr19 29360997 . T A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:12,7:0.36842:deepvariant:5,0,15
- chr19 29405837 . G T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:27:18,9:0.33333:deepvariant:1,0,10
- chr19 29407354 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:14,5:0.26316:deepvariant:1,0,16
- chr19 29407402 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:15,5:0.25000:deepvariant:0,0,15
- chr19 29415322 . T C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:2,4:0.66667:deepvariant:8,15,0
- chr19 29415338 . G C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,3:0.60000:deepvariant:1,19,0
- chr19 29415355 . C G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,17,0
- chr19 29415368 . T G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:12,16,0
- chr19 29417325 . C T 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,23,0
- chr19 29417359 . G C 22.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:22,23,0
- chr19 29417427 . C T 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,26,0
- chr19 29417494 . T C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,25,0
- chr19 29417547 . T G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,29,0
- chr19 29417629 . G C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,25,0
- chr19 29417634 . A G 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,28,0
- chr19 29417649 . C G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,24,0
- chr19 29431756 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,16,0
- chr19 29431773 . A C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,15,0
- chr19 29431818 . C T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:12,16,0
- chr19 29436356 . C G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,18,0
- chr19 29456074 . G C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:16,10:0.38462:deepvariant:2,0,12
- chr19 29473136 . G C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:9,3:0.25000:deepvariant:3,0,12
- chr19 29473434 . T A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,10
- chr19 29713700 . T G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,5:0.55556:deepvariant:1,0,4
- chr19 29748866 . C G 9.058 PASS H;FAU=0;FCU=3;FGU=5;FTU=0;RAU=0;RCU=6;RGU=3;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:17:0.4706:0,8:0:8:0,0:0:9:8:0:0:8:0:0
- chr19 36773285 . A C 11.323 PASS H;FAU=4;FCU=6;FGU=0;FTU=0;RAU=4;RCU=4;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:18:0.5556:0,10:0:5:0,0:8:10:0:0:5:0:0:0
- chr19 41554333 . T A 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:8:6,2:0.25000:small_model:19,0,46
- chr19 47283184 . G A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:13:11,2:0.15385:small_model:14,0,42
- chr19 50247352 . G C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:2,3:0.60000:small_model:10,0,17
- chr19 50247411 . T C 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,3:0.75000:small_model:19,12,0
- chr19 52458626 . C T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:15:10,5:0.33333:small_model:11,0,29
- chr19 52458668 . A G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:15:10,5:0.33333:deepvariant:6,0,21
- chr19 52458671 . C G 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:15:10,5:0.33333:deepvariant:9,0,24
- chr19 52458684 . A G 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:15:10,5:0.33333:small_model:16,0,31
- chr19 52458691 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:10,4:0.28571:small_model:9,0,35
- chr19 52458692 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:10,4:0.28571:deepvariant:3,0,26
- chr19 52458720 . A G 28.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:28:14:10,4:0.28571:small_model:28,0,49
- chr19 52458756 . A G 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:15:10,5:0.33333:small_model:17,0,40
- chr19 52459087 . A G 39.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:14:2,3:0.21429:deepvariant:38,31,34
- chr19 57327128 . G A 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:3:1,2:0.66667:small_model:14,0,14
- chr19 58568297 . G A 25.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:25,18,0
- chr19 58568355 . A G 29.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:4:0,4:1.00000:small_model:29,20,0
- chr20 1893574 . C T 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:9:0,9:1.00000:small_model:19,20,0
- chr20 1893588 . C T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:9:0,9:1.00000:small_model:15,22,0
- chr20 1893591 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:1,8:0.88889:deepvariant:3,4,0
- chr20 1893605 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:9:5,4:0.44444:deepvariant:8,0,11
- chr20 1893624 . C T 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:7:0,7:1.00000:small_model:20,19,0
- chr20 1893630 . C T 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:16,15,0
- chr20 1893644 . C T 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:22,18,0
- chr20 1893658 . C T 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:18,15,0
- chr20 1893672 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,9,0
- chr20 1893687 . C T 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,6:1.00000:deepvariant:7,19,0
- chr20 1893702 . C T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:7,14,0
- chr20 1893710 . C T 24 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:23,20,0
- chr20 1893716 . C T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,16,0
- chr20 1893724 . C T 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:10,14,0
- chr20 1893730 . C T 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:13,14,0
- chr20 1893738 . C T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:10,15,0
- chr20 1893744 . C T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:deepvariant:14,15,0
- chr20 1893752 . C T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:15,13,0
- chr20 1893758 . C T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:10,13,0
- chr20 1893772 . C T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,5:1.00000:deepvariant:8,16,0
- chr20 1893775 . G A 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:7,15,0
- chr20 1893780 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:5,17,0
- chr20 1893829 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,14,0
- chr20 1893895 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,11,0
- chr20 1893901 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,13,0
- chr20 1893916 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,12,0
- chr20 1893924 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:3,12,0
- chr20 1893930 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,13,0
- chr20 1893938 . C T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,13,0
- chr20 1893944 . C T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr20 1893952 . C T 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,13,0
- chr20 1893958 . C T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,15,0
- chr20 1893966 . C T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:4,17,0
- chr20 1893972 . C T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,17,0
- chr20 1893986 . C T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,16,0
- chr20 1894000 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,15,0
- chr20 1894028 . C T 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,14,0
- chr20 1894042 . C T 23.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:23,15,0
- chr20 1894056 . C T 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:22,18,0
- chr20 1894070 . C T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,17,0
- chr20 1894084 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,3,0
- chr20 1894098 . C T 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:22,12,0
- chr20 1894112 . C T 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:19,14,0
- chr20 1894126 . C T 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:20,13,0
- chr20 1894214 . G A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:9,8,0
- chr20 1894532 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:3,9,0
- chr20 1894546 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,9,0
- chr20 1894588 . C T 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:12,11,0
- chr20 1894746 . A G 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:18:6:3,3:0.50000:small_model:18,0,23
- chr20 1894856 . G A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:11,14,0
- chr20 1894867 . C T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:16,12,0
- chr20 1894881 . C T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:7,12,0
- chr20 1894884 . A G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:12,20,0
- chr20 1894895 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:6,9,0
- chr20 1894898 . A G 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:7,15,0
- chr20 1894909 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:3,8,0
- chr20 1894912 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:1,8,0
- chr20 1894923 . C T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:9,18,0
- chr20 1894926 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:0,8,0
- chr20 1894937 . C T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,17,0
- chr20 1894940 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,11,0
- chr20 1894951 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:2,2:0.50000:deepvariant:2,10,0
- chr20 1894954 . A G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:5,12,0
- chr20 1894965 . C T 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:5,10,0
- chr20 1894979 . C T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:15,13,0
- chr20 1895011 . A G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:4:2,2:0.50000:small_model:12,0,22
- chr20 1895025 . A G 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:18,14,0
- chr20 1895036 . C T 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:21,12,0
- chr20 1895050 . C T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:8,16,0
- chr20 1895063 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,9,0
- chr20 1895067 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,8,0
- chr20 1895152 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:7,4:0.36364:small_model:10,0,14
- chr20 1895245 . C T 24.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:24,16,0
- chr20 1895259 . C T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:3,11,0
- chr20 1895273 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,10,0
- chr20 1895281 . C T 29.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:29,16,0
- chr20 1895287 . C T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:10,20,0
- chr20 1895295 . C T 20.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:20,16,0
- chr20 1895301 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,14,0
- chr20 1895315 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,12,0
- chr20 1895329 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,11,0
- chr20 1895343 . C T 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:10,17,0
- chr20 1895346 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:deepvariant:9,19,0
- chr20 1897842 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:7,3:0.30000:deepvariant:1,0,4
- chr20 1897927 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:1,7,0
- chr20 1898026 . G A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,15,0
- chr20 1899257 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,9,0
- chr20 1899309 . G A 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:11,13,0
- chr20 1899351 . G A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,18,0
- chr20 1899370 . C T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,19,0
- chr20 1899393 . G A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:10,20,0
- chr20 1899398 . C T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,16,0
- chr20 1899484 . C T 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:21,16,0
- chr20 1899498 . C T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,17,0
- chr20 1900429 . G A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,10,0
- chr20 1900468 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,17,0
- chr20 1900574 . C T 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:17,21,0
- chr20 1901498 . C T 29.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:6:0,6:1.00000:small_model:29,21,0
- chr20 1901504 . C T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:7:1,6:0.85714:deepvariant:8,15,0
- chr20 1901535 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:7:2,5:0.71429:small_model:10,0,20
- chr20 1901549 . A G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:1,7,0
- chr20 1901602 . A G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:13,20,0
- chr20 1901658 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:2,6,0
- chr20 1901748 . C T 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,15,0
- chr20 1901848 . C T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,13,0
- chr20 1901882 . C T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:8,17,0
- chr20 1902552 . A G 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:15,18,0
- chr20 1902753 . G C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,9,0
- chr20 1902819 . C T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,15,0
- chr20 1902839 . C T 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,17,0
- chr20 1902937 . C T 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:8:1,7:0.87500:deepvariant:7,13,0
- chr20 1903337 . A G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:4,6:0.60000:deepvariant:0,7,0
- chr20 1903365 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:3,5:0.62500:deepvariant:1,12,0
- chr20 1903474 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:4,6:0.60000:deepvariant:0,9,0
- chr20 1904508 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,4:0.57143:deepvariant:1,7,0
- chr20 1904533 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:4,3:0.42857:deepvariant:2,6,0
- chr20 1904555 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,3:0.42857:deepvariant:2,3,0
- chr20 1904564 . G A 22.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:22,14,0
- chr20 1904632 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:5,14,0
- chr20 1904673 . G C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,19,0
- chr20 1904929 . A G 21.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:21,16,0
- chr20 1904999 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,19,0
- chr20 1905010 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,17,0
- chr20 1905027 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,19,0
- chr20 1905041 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,16,0
- chr20 1905065 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,15,0
- chr20 1905166 . G A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:1,4:0.80000:deepvariant:8,16,0
- chr20 1906413 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,5:0.71429:deepvariant:0,13,0
- chr20 1906427 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:1,13,0
- chr20 1906438 . C T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:1,6:0.85714:deepvariant:6,13,0
- chr20 1906639 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:2,6:0.75000:deepvariant:0,6,0
- chr20 3098742 . A G 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:7:4,3:0.42857:small_model:20,0,37
- chr20 6676258 . T C 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:25:20,5:0.20000:deepvariant:7,0,27
- chr20 13161799 . A G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:12:8,4:0.33333:small_model:12,0,33
- chr20 16339081 . T C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:7:4,3:0.42857:small_model:17,0,28
- chr20 24841588 . A G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:13,7:0.35000:deepvariant:5,0,23
- chr20 26364906 . T C 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:12:8,4:0.33333:small_model:8,0,27
- chr20 26364924 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:11:7,4:0.36364:small_model:11,0,26
- chr20 26364938 . G A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:7,4:0.36364:small_model:9,0,23
- chr20 26364941 . T A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:6,4:0.40000:small_model:13,0,23
- chr20 26364945 . A T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:6,4:0.40000:small_model:8,0,21
- chr20 26364960 . C G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:6,4:0.40000:small_model:8,0,30
- chr20 26364972 . T C 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:6,4:0.40000:small_model:12,0,26
- chr20 26364979 . T C 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:10:6,4:0.40000:small_model:18,0,34
- chr20 26364993 . G T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:8:6,2:0.25000:small_model:13,0,35
- chr20 26451953 . G T 54.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:47:5:0,5:1.00000:small_model:54,47,0
- chr20 26452102 . G C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:0.60000:deepvariant:11,36,1
- chr20 26496526 . C T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:11:5,6:0.54545:deepvariant:1,0,0
- chr20 26496549 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:5,6:0.54545:deepvariant:4,0,4
- chr20 26496708 . T G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:5,6:0.54545:deepvariant:8,0,10
- chr20 26497422 . G C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:6,3:0.30000:deepvariant:3,0,12
- chr20 26497484 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,4:0.40000:deepvariant:1,0,10
- chr20 26500631 . G A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:5:2,3:0.60000:deepvariant:6,0,2
- chr20 26500721 . C A 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:4:1,3:0.75000:deepvariant:7,0,4
- chr20 26547620 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:12,3:0.20000:deepvariant:0,0,21
- chr20 26600098 . C A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:9,3:0.25000:deepvariant:0,0,8
- chr20 26602292 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:11,4:0.26667:deepvariant:2,0,8
- chr20 26602400 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:12,4:0.25000:deepvariant:2,0,11
- chr20 26602466 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:12,4:0.25000:deepvariant:4,0,13
- chr20 26602561 . G T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:17:13,4:0.23529:deepvariant:4,0,12
- chr20 26602629 . G C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:17:11,6:0.35294:deepvariant:5,0,13
- chr20 26603285 . A C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:14,3:0.17647:deepvariant:2,0,13
- chr20 26603335 . A C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:13,4:0.23529:deepvariant:3,0,14
- chr20 26603535 . A C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:12,4:0.25000:deepvariant:2,0,14
- chr20 26603598 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:14,3:0.17647:deepvariant:2,0,13
- chr20 26659498 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:1,0,15
- chr20 26659800 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:2,0,15
- chr20 26659827 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:9,3:0.25000:deepvariant:1,0,12
- chr20 26914879 . C T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:3,4:0.57143:deepvariant:6,0,7
- chr20 26921530 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:7,3:0.30000:deepvariant:4,0,13
- chr20 27020099 . G T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:9,4:0.30769:deepvariant:2,0,11
- chr20 27023916 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:8,3:0.27273:deepvariant:0,0,8
- chr20 27024019 . G T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:7,3:0.30000:deepvariant:3,0,8
- chr20 27107083 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:20:15,5:0.25000:deepvariant:0,0,17
- chr20 27265367 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:24:12,11:0.45833:deepvariant:1,0,15
- chr20 27265735 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:13,7:0.33333:deepvariant:1,0,19
- chr20 27267942 . C A 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:5,10:0.66667:deepvariant:5,2,0
- chr20 27268081 . A T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:5,9:0.64286:deepvariant:6,0,0
- chr20 27502943 . T G 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:1,4:0.80000:deepvariant:12,11,0
- chr20 27815780 . C T 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,17,0
- chr20 28134763 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,22,0
- chr20 28134853 . G C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,17,0
- chr20 28134938 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,20,0
- chr20 28137622 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr20 28989724 . G A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:5,8:0.61538:deepvariant:7,0,9
- chr20 29183785 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:9,3:0.23077:deepvariant:2,0,16
- chr20 29183849 . A C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,3:0.23077:deepvariant:2,0,15
- chr20 29183934 . C A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:11,3:0.21429:deepvariant:2,0,13
- chr20 29183941 . G A 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:11,3:0.21429:deepvariant:2,0,12
- chr20 29184016 . G T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:11,3:0.21429:deepvariant:0,0,17
- chr20 29184840 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:10,2:0.16667:deepvariant:1,0,18
- chr20 29185050 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:8,2:0.20000:deepvariant:5,0,21
- chr20 29185233 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,2:0.15385:deepvariant:1,0,16
- chr20 29185296 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:9,2:0.16667:deepvariant:0,0,12
- chr20 29211514 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:14,5:0.26316:deepvariant:0,0,13
- chr20 29246636 . A G 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:11,4:0.26667:deepvariant:4,0,22
- chr20 29246925 . A T 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:15:10,5:0.33333:deepvariant:4,0,22
- chr20 29247217 . A C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:13,4:0.23529:deepvariant:3,0,18
- chr20 29292071 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:5:2,3:0.60000:deepvariant:0,2,0
- chr20 29292227 . G T 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,3:0.60000:deepvariant:16,18,0
- chr20 29292255 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,10,0
- chr20 29292360 . A T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:2,3:0.60000:small_model:10,0,14
- chr20 29292458 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:1,0,2
- chr20 29292849 . G A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:6:4,2:0.33333:small_model:9,0,21
- chr20 29299725 . A C 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:20,17,0
- chr20 29299765 . A T 21.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:4:0,4:1.00000:small_model:21,19,0
- chr20 29299779 . T C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:14,17,0
- chr20 29299813 . T C 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:17,16,0
- chr20 29299832 . A T 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:18,18,0
- chr20 29299858 . C A 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:20,17,0
- chr20 29299895 . C G 18.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:18,18,0
- chr20 29299903 . C A 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,18,0
- chr20 29299928 . A G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:small_model:12,16,0
- chr20 29299981 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,15,0
- chr20 29299988 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,15,0
- chr20 29300122 . G C 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:9,9,0
- chr20 29300227 . T A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,15,0
- chr20 29300240 . A T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,13,0
- chr20 29300247 . A C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,16,0
- chr20 29300255 . T G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,16,0
- chr20 29832844 . T C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:10:6,4:0.40000:deepvariant:7,0,25
- chr20 29832855 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:6,4:0.40000:deepvariant:3,0,20
- chr20 29832856 . A G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:6,4:0.40000:small_model:8,0,21
- chr20 29832859 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:6,4:0.40000:deepvariant:2,0,19
- chr20 29832884 . C T 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:10:6,4:0.40000:small_model:11,0,32
- chr20 29832889 . T G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:10:6,4:0.40000:small_model:15,0,27
- chr20 29832907 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:10:6,4:0.40000:deepvariant:6,0,23
- chr20 29832923 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:2,0,17
- chr20 29832939 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:10:6,4:0.40000:deepvariant:4,0,20
- chr20 29832962 . G A 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:20:9:6,3:0.33333:small_model:20,0,41
- chr20 29832970 . C T 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:9:6,3:0.33333:small_model:18,0,39
- chr20 29833145 . A T 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:6,3:0.33333:small_model:12,0,32
- chr20 29833173 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:1,0,22
- chr20 29833175 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:6,3:0.33333:deepvariant:0,0,20
- chr20 29833186 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:1,0,21
- chr20 29833197 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,3:0.33333:deepvariant:2,0,22
- chr20 29833198 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:9:6,3:0.33333:deepvariant:2,0,21
- chr20 29833226 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:6,3:0.33333:deepvariant:0,0,18
- chr20 29833238 . G C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:6,3:0.33333:small_model:9,0,23
- chr20 29838379 . G A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:2,3:0.60000:small_model:6,0,34
- chr20 30291462 . C T 16.222 PASS H;FAU=0;FCU=2;FGU=0;FTU=5;RAU=0;RCU=2;RGU=0;RTU=5 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:16:14:0.7143:0,10:0:9:0,0:0:4:0:10:0:9:0:0
- chr20 30649831 . T A 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:20,8,0
- chr20 30649850 . T C 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:16,10,0
- chr20 30666682 . T G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:13,16,0
- chr20 30666685 . T G 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:18,16,0
- chr20 30666740 . T C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:13,10,0
- chr20 30667507 . A T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:8,11,0
- chr20 30667552 . C T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,13,0
- chr20 31755799 . A C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:14,13,0
- chr20 31755839 . C T 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:16,16,0
- chr20 31755840 . A G 29 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:3:0,3:1.00000:small_model:29,24,0
- chr20 31777506 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,4:0.80000:deepvariant:7,13,0
- chr20 31777614 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:6:3,3:0.50000:deepvariant:2,0,10
- chr20 31777740 . A G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:9:5,4:0.44444:deepvariant:9,0,15
- chr20 31777881 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:2,0,12
- chr20 31777882 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,4:0.40000:deepvariant:0,0,10
- chr20 31777906 . G T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:10:5,5:0.50000:deepvariant:8,0,11
- chr20 31778037 . T G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:13:9,4:0.30769:deepvariant:5,0,20
- chr20 31778213 . G A 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:14:2,12:0.85714:small_model:19,16,0
- chr20 31778228 . G A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:14:2,12:0.85714:small_model:16,19,0
- chr20 31832991 . A G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,17,0
- chr20 31832998 . T C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,21,0
- chr20 31833176 . G A 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:17,15,0
- chr20 31833237 . T A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:15,19,0
- chr20 31833246 . T A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,21,0
- chr20 31833318 . C A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:16,19,0
- chr20 31833332 . G C 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:13,17,0
- chr20 31833372 . A G 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:16,14,0
- chr20 31833631 . T G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr20 31833758 . G T 17.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:17,15,0
- chr20 31834072 . C T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:14,18,0
- chr20 31834218 . C T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:17,15,0
- chr20 32024251 . G C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:42:35,7:0.16667:deepvariant:1,0,16
- chr20 32093894 . A G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:7:18:11,6:0.33333:deepvariant:0,49,39
- chr20 32094110 . G C 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:8:18:4,3:0.16667:deepvariant:0,103,47
- chr20 32119214 . C A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:9,4:0.30769:deepvariant:5,0,18
- chr20 32119308 . A T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:9,5:0.35714:deepvariant:2,0,6
- chr20 32126539 . A G 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:12:0,12:1.00000:small_model:19,45,0
- chr20 32127182 . T A 38 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:38:13:0,11:0.84615:small_model:38,70,0
- chr20 32133235 . T G 25.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:17:1,15:0.88235:small_model:25,51,0
- chr20 32133236 . C G 45.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:45:17:0,16:0.94118:small_model:45,56,0
- chr20 32133248 . T A 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:84,99,0
- chr20 32133259 . A T 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:16:0,16:1.00000:small_model:25,65,0
- chr20 32133401 . C G 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:17:0,17:1.00000:small_model:17,65,0
- chr20 32133492 . G A 22.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:17:0,17:1.00000:small_model:22,52,0
- chr20 32133494 . C T 63.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:64:17:0,17:1.00000:small_model:65,87,0
- chr20 32133678 . A T 66.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:65:17:0,17:1.00000:small_model:68,70,0
- chr20 32133684 . C G 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:75,99,0
- chr20 32133795 . T G 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:16:1,15:0.93750:small_model:99,99,0
- chr20 32133958 . C T 35 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:35:17:0,17:1.00000:small_model:34,79,0
- chr20 32133972 . C A 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:99,99,0
- chr20 32133999 . T G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:17:0,17:1.00000:small_model:11,50,0
- chr20 32134045 . C G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:17:0,17:1.00000:small_model:10,18,0
- chr20 32134053 . C T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:17:0,17:1.00000:small_model:9,20,0
- chr20 32135822 . G A 41.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:41:17:0,17:1.00000:small_model:41,99,0
- chr20 32135828 . G T 72.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:81,92,0
- chr20 32135833 . A T 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:99,99,0
- chr20 32135839 . T G 62.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:63:17:0,17:1.00000:small_model:63,94,0
- chr20 32135850 . A G 30.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:30:17:0,17:1.00000:small_model:30,90,0
- chr20 32135852 . G A 46.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:46:17:0,17:1.00000:small_model:46,99,0
- chr20 32135854 . A G 24.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:17:0,17:1.00000:small_model:24,71,0
- chr20 32135888 . A T 32 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:32:17:0,17:1.00000:small_model:32,65,0
- chr20 32135892 . T A 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:81,99,0
- chr20 32135896 . T A 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:16:0,16:1.00000:small_model:14,39,0
- chr20 32135913 . A T 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:82,99,0
- chr20 32135945 . T G 65.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:65:17:0,17:1.00000:small_model:66,95,0
- chr20 32135950 . C G 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:99,99,0
- chr20 32135954 . A G 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:79,99,0
- chr20 32135957 . T A 67.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:67:17:0,17:1.00000:small_model:72,99,0
- chr20 32135964 . C G 27.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:27:17:0,17:1.00000:small_model:27,90,0
- chr20 32135967 . T A 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:16:0,16:1.00000:small_model:75,99,0
- chr20 32135995 . A G 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:17:0,17:1.00000:small_model:99,99,0
- chr20 32136855 . C G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:16:0,16:1.00000:small_model:10,20,0
- chr20 32137006 . C A 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:16:0,16:1.00000:small_model:99,99,0
- chr20 32137013 . A T 59.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:59:16:0,16:1.00000:small_model:59,99,0
- chr20 32137145 . A G 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:15:0,15:1.00000:small_model:15,42,0
- chr20 32137516 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:16:0,16:1.00000:small_model:13,34,0
- chr20 32138019 . C G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:13:0,13:1.00000:small_model:10,27,0
- chr20 32139373 . T G 72.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:14:0,14:1.00000:small_model:74,91,0
- chr20 32139398 . C G 38.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:37:14:0,14:1.00000:small_model:38,42,0
- chr20 32139486 . A T 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:14:0,14:1.00000:small_model:99,99,0
- chr20 32139552 . C G 42.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:43:14:0,14:1.00000:small_model:42,83,0
- chr20 32139564 . T A 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:14:0,13:0.92857:small_model:99,99,0
- chr20 32139646 . C T 27.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:27:14:0,14:1.00000:small_model:27,39,0
- chr20 32139783 . A G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:14:0,14:1.00000:small_model:12,41,0
- chr20 32140018 . C G 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:14:0,13:0.92857:small_model:99,99,0
- chr20 32140387 . T G 72.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:14:0,14:1.00000:small_model:75,99,0
- chr20 32140388 . C G 72.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:72:14:0,14:1.00000:small_model:90,93,0
- chr20 32140669 . G A 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:14:0,14:1.00000:small_model:8,36,0
- chr20 32143330 . A T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:13:0,13:1.00000:small_model:9,22,0
- chr20 32147649 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:16:0,4:0.25000:deepvariant:0,18,0
- chr20 32148306 . T G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:20:0,9:0.45000:small_model:1,12,0
- chr20 32148370 . C G 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:18:0,18:1.00000:small_model:15,23,0
- chr20 32152894 . A G 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:18:0,17:0.94444:small_model:13,46,0
- chr20 32154960 . T A 20.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:19:0,19:1.00000:small_model:20,30,0
- chr20 32176423 . C G 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:13:0,13:1.00000:small_model:20,36,0
- chr20 32177671 . C T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:12:0,11:0.91667:small_model:8,38,0
- chr20 32178047 . T G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:10,24,0
- chr20 32197979 . A G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:30:13,16:0.53333:deepvariant:4,0,5
- chr20 32199022 . T C 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:29:16,13:0.44828:deepvariant:5,0,0
- chr20 32201395 . C G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:2,10:0.83333:deepvariant:0,19,0
- chr20 32201399 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:12:2,10:0.83333:deepvariant:1,19,0
- chr20 32204093 . A G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:10:0,10:1.00000:small_model:7,29,0
- chr20 32212400 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:6:7:0,2:0.28571:deepvariant:8,26,6
- chr20 32217505 . C T 46.9 PASS . GT:GQ:DP:AD:VAF:MID:PL ./.:21:25:0,5:0.20000:small_model:46,66,20
- chr20 32224635 . T A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:5,14,0
- chr20 32224696 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,16,0
- chr20 32224715 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,18,0
- chr20 32226073 . A G 31.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:32:7:0,7:1.00000:small_model:31,50,0
- chr20 32226096 . A G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:12,32,0
- chr20 32226701 . G T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:4,9,0
- chr20 32226961 . C T 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:14,19,0
- chr20 32227414 . C A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:13,7:0.35000:deepvariant:3,0,21
- chr20 32227602 . C G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:13,7:0.35000:deepvariant:3,0,17
- chr20 32227622 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:13,8:0.38095:deepvariant:1,0,11
- chr20 32227752 . T C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:12,8:0.40000:deepvariant:5,0,21
- chr20 32227754 . G T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:20:12,8:0.40000:small_model:9,0,21
- chr20 32227934 . G T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:12,6:0.31579:deepvariant:0,0,13
- chr20 32313447 . T A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,16,0
- chr20 32313893 . A T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,15,0
- chr20 32336442 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:6,18,0
- chr20 32336731 . C T 19.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,29,0
- chr20 32350291 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:4,17,0
- chr20 32350293 . A C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,3:0.75000:deepvariant:6,21,0
- chr20 32350319 . T G 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,2:0.50000:deepvariant:5,34,0
- chr20 32351786 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,20,0
- chr20 32352055 . C A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,22,0
- chr20 32421358 . G T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:3,5:0.62500:deepvariant:1,11,0
- chr20 32452143 . A C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:9,29,0
- chr20 32453707 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,36,0
- chr20 32453718 . A G 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,34,0
- chr20 32456553 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:10,24,0
- chr20 32456994 . C A 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:8:0,8:1.00000:small_model:13,31,0
- chr20 32457572 . C G 25.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:9:0,9:1.00000:small_model:25,34,0
- chr20 32457747 . A T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,18,0
- chr20 32457786 . T C 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:15,15,0
- chr20 32457802 . C G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,21,0
- chr20 32457815 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,21,0
- chr20 32457816 . G C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,22,0
- chr20 32457817 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,22,0
- chr20 32457902 . A G 18.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:18,12,0
- chr20 32457991 . G T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,24,0
- chr20 32457992 . G T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,29,0
- chr20 32458011 . G C 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,20,0
- chr20 32458075 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:12,11,0
- chr20 32460238 . G A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:4:0,4:1.00000:small_model:13,29,0
- chr20 32460273 . A G 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:4:0,4:1.00000:small_model:20,24,0
- chr20 32505429 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,15,0
- chr20 32528714 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,19,0
- chr20 32528716 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,19,0
- chr20 32549451 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,4:0.80000:small_model:9,17,0
- chr20 32550337 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,20,0
- chr20 32550459 . A C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:0,2:0.50000:deepvariant:0,51,0
- chr20 32550505 . A G 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,2:0.50000:deepvariant:17,36,0
- chr20 32588201 . A G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:12,18,0
- chr20 32588672 . C G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,5:0.83333:small_model:13,18,0
- chr20 32588686 . A C 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,3:0.50000:deepvariant:6,22,0
- chr20 32588694 . G A 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:15,31,0
- chr20 32589051 . C G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:7,21,0
- chr20 32589211 . C G 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,17,0
- chr20 32606767 . T G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:13,12,0
- chr20 32607372 . T G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,20,0
- chr20 32607692 . A G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,17,0
- chr20 32608050 . G T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:13,13,0
- chr20 32616553 . C T 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,4:0.80000:deepvariant:7,17,0
- chr20 32649420 . T G 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,31,0
- chr20 32650776 . C A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:11,31,0
- chr20 32650869 . T G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr20 32650870 . T G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,34,0
- chr20 32650873 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:3,20,0
- chr20 32656568 . C G 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:9:0,9:1.00000:small_model:13,22,0
- chr20 32658000 . A G 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:14:5,7:0.50000:small_model:6,23,0
- chr20 32658213 . C G 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:9:0,9:1.00000:small_model:24,33,0
- chr20 32658791 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:0,15,0
- chr20 32658792 . T G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:15,42,0
- chr20 32670235 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:10,23,0
- chr20 32674730 . A G 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,6:1.00000:deepvariant:16,21,0
- chr20 32682790 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,17,0
- chr20 32687084 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:4,21,0
- chr20 32697097 . T C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:7:4,3:0.42857:deepvariant:12,18,0
- chr20 32697663 . T G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:7:0,7:1.00000:small_model:13,22,0
- chr20 32698059 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,21,0
- chr20 32698172 . T A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:0,3:0.42857:deepvariant:1,20,0
- chr20 32699128 . C G 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:8:0,6:0.75000:small_model:10,27,0
- chr20 32704927 . C T 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,6:0.85714:small_model:15,26,0
- chr20 32772751 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,4:0.80000:small_model:11,28,0
- chr20 32793349 . G A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,5:1.00000:small_model:17,26,0
- chr20 32793576 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.85714:deepvariant:0,19,0
- chr20 32868595 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:0,8:1.00000:deepvariant:1,20,0
- chr20 32868763 . C G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:10:0,9:0.90000:deepvariant:7,20,0
- chr20 32868797 . T C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:9:0,8:0.88889:small_model:14,25,0
- chr20 32868800 . C A 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:9:1,8:0.88889:deepvariant:11,18,0
- chr20 32868814 . C A 18 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:10:0,10:1.00000:small_model:17,28,0
- chr20 32868896 . G C 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:8:0,7:0.87500:deepvariant:3,20,0
- chr20 32868927 . A G 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:10:0,9:0.90000:small_model:16,36,0
- chr20 32868970 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:8:0,7:0.87500:small_model:10,29,0
- chr20 32869172 . T G 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:17,19,0
- chr20 32869226 . A T 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,3:0.75000:small_model:19,16,0
- chr20 32869256 . A T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,4:0.80000:deepvariant:3,20,0
- chr20 32869312 . G T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:2,3:0.60000:deepvariant:2,18,0
- chr20 32869347 . C G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:15,21,0
- chr20 32869482 . T G 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,21,0
- chr20 32869570 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,14,0
- chr20 34349515 . G A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:8,4:0.33333:deepvariant:5,0,13
- chr20 34349554 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:4:0,4:1.00000:deepvariant:3,0,4
- chr20 34349628 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:6,3:0.30000:deepvariant:3,0,15
- chr20 34349921 . A G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:14:11,3:0.21429:small_model:8,0,34
- chr20 34349925 . T A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:14:10,4:0.28571:small_model:14,0,36
- chr20 44725977 . T C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:9,14,0
- chr20 44726087 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,17,0
- chr20 44726098 . A G 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,19,0
- chr20 44726111 . C T 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,16,0
- chr20 49580316 . C A 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:6,3:0.33333:small_model:16,0,31
- chr20 49644858 . A T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:4:2,2:0.50000:deepvariant:10,0,11
- chr20 49644859 . G A 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:4:2,2:0.50000:deepvariant:7,0,11
- chr20 49644909 . A T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:3:1,2:0.66667:small_model:10,0,17
- chr20 49644915 . T G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:3:1,2:0.66667:deepvariant:4,0,9
- chr20 49644918 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:3:1,2:0.66667:deepvariant:3,0,8
- chr20 49644928 . A C 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:3:1,2:0.66667:deepvariant:3,0,5
- chr20 49645046 . A G 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:3:1,2:0.66667:small_model:15,0,25
- chr20 49645063 . G T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:3:1,2:0.66667:small_model:11,0,16
- chr20 49645128 . T C 38.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:3:0,3:1.00000:small_model:38,20,0
- chr20 49645942 . G T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:5:3,2:0.40000:deepvariant:8,0,22
- chr20 49646468 . G T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:6:4,2:0.33333:deepvariant:8,0,25
- chr20 49646469 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:6:4,2:0.33333:deepvariant:3,0,22
- chr20 49646472 . T C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:6:4,2:0.33333:deepvariant:15,0,31
- chr20 49893461 . A T 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:small_model:16,10,0
- chr20 49893490 . G A 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:13,7,0
- chr20 49893549 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,8,0
- chr20 49893566 . G C 22.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:5:0,5:1.00000:small_model:22,17,0
- chr20 49893580 . T C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,5:1.00000:deepvariant:6,21,0
- chr20 49893581 . G C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,20,0
- chr20 49893615 . A C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:8,22,0
- chr20 49893641 . A G 19.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:19,13,0
- chr20 49893659 . C T 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:9,24,0
- chr20 49893663 . T A 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:12,13,0
- chr20 49893679 . G C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:16,20,0
- chr20 49893682 . T G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:1,13,0
- chr20 49893687 . T C 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:4:0,4:1.00000:small_model:23,17,0
- chr20 49893696 . A G 18.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,3:0.75000:small_model:18,15,0
- chr20 49893697 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,15,0
- chr20 49893704 . A G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:9,23,0
- chr20 49893710 . C A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,3:0.75000:deepvariant:4,14,0
- chr20 49893713 . A C 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,19,0
- chr20 49893741 . C T 27.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:small_model:27,11,0
- chr20 49893762 . C A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:1,3:0.75000:deepvariant:6,16,0
- chr20 49893770 . G C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:11,12,0
- chr20 49893776 . C A 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:14,13,0
- chr20 49893784 . C G 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,22,0
- chr20 49893793 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,9,0
- chr20 49893794 . T G 20.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:20,17,0
- chr20 55611229 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:6,5:0.41667:deepvariant:0,0,20
- chr20 59876307 . A G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:8,3:0.27273:deepvariant:3,0,17
- chr20 63115034 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:8,5:0.38462:deepvariant:5,0,18
- chr20 63115045 . T C 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:14:9,5:0.35714:deepvariant:8,0,21
- chr20 63849180 . C T 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:15,9,0
- chr20 63849254 . C T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:9,14,0
- chr20 64630063 . A C 4.4 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:11:8,3:0.27273:2,10,0
- chr20 64675199 . G C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:5,12,0
- chr20 64830063 . C T 33.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:33:8:5,3:0.37500:small_model:33,0,48
- chr20 64830097 . G C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,20
- chr20 64830098 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:1,0,21
- chr20 64830119 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:5,2:0.28571:deepvariant:0,0,17
- chr20 64870778 . G C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:10:8,2:0.20000:deepvariant:7,0,27
- chr20 64871113 . G T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:7,2:0.22222:deepvariant:9,0,31
- chr20 64871179 . T G 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:9:7,2:0.22222:deepvariant:14,0,35
- chr20 64906480 . G A 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:20:11,7:0.35000:small_model:14,0,23
- chr20 64971459 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:11,2:0.15385:deepvariant:1,0,23
- chr20 65255519 . A G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:8,4:0.22222:deepvariant:6,0,48
- chr20 65255521 . G A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:12:8,4:0.33333:small_model:17,0,42
- chr20 65423150 . T A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:15:8,5:0.33333:deepvariant:0,7,0
- chr20 65862921 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:4:2,2:0.50000:deepvariant:0,0,1
- chr20 65909502 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:3:28:10,10:0.35714:deepvariant:3,2,19
- chr20 65995136 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,4:0.36364:deepvariant:0,0,20
- chr20 66171919 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:36:24,12:0.33333:3,5,0
- chr20 66172696 . C A 22.5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:8:36:23,12:0.33333:21,7,0
- chr21 101856 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,13,0
- chr21 102067 . A G 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:8,6,0
- chr21 515812 . A C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,13,0
- chr21 515844 . G T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,18,0
- chr21 515854 . T C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,19,0
- chr21 515906 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,22,0
- chr21 784824 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:13,6:0.31579:deepvariant:3,0,18
- chr21 903640 . C T 26.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,2:0.40000:deepvariant:24,18,6
- chr21 914003 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,4:0.57143:deepvariant:0,16,0
- chr21 914046 . A T 30.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:0,4:0.57143:deepvariant:29,38,0
- chr21 943721 . A C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:3,6,0
- chr21 943775 . A G 19.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:19,23,0
- chr21 943854 . A C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:4,5,0
- chr21 943904 . T G 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:13,14,0
- chr21 944970 . T G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:8,4:0.33333:deepvariant:1,0,15
- chr21 949181 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:12,3:0.20000:deepvariant:0,0,20
- chr21 1131723 . G A 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:20,30,0
- chr21 1131736 . T G 18.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,29,0
- chr21 1131743 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,30,0
- chr21 1131754 . G A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,25,0
- chr21 1249516 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,13,0
- chr21 1249523 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,16,0
- chr21 1282056 . C T 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr21 1282086 . C A 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:11,13,0
- chr21 1282520 . C G 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,29,0
- chr21 1332119 . T A 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:22,27,0
- chr21 1340306 . T C 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:21:2,17:0.80952:small_model:17,24,0
- chr21 1347167 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,20,0
- chr21 1382639 . C T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,21,0
- chr21 1395294 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:14,9:0.39130:deepvariant:0,0,7
- chr21 1431706 . G T 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:14:0,14:1.00000:small_model:21,41,0
- chr21 1431728 . C A 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:16:0,15:0.93750:small_model:15,29,0
- chr21 1431745 . C A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:16:1,13:0.81250:deepvariant:2,24,0
- chr21 1431794 . T G 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:16:0,16:1.00000:small_model:20,37,0
- chr21 1431796 . T A 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:16:0,16:1.00000:small_model:24,39,0
- chr21 1431813 . T C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:16:0,16:1.00000:small_model:17,26,0
- chr21 1431818 . C A 21.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:17:0,16:0.94118:small_model:21,32,0
- chr21 1431925 . A C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:17:3,14:0.82353:small_model:10,22,0
- chr21 1432713 . T C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:16:2,14:0.87500:small_model:14,25,0
- chr21 1482350 . G T 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,27,0
- chr21 1482372 . C A 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:14,25,0
- chr21 1482438 . T G 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,28,0
- chr21 1482440 . T A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,39,0
- chr21 1482462 . C A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:11,26,0
- chr21 1491063 . A T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:12,12,0
- chr21 1549601 . G T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,30,0
- chr21 1550848 . T G 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:6:0,6:1.00000:small_model:20,23,0
- chr21 1550851 . A T 33 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:30:6:0,6:1.00000:small_model:33,32,0
- chr21 1555146 . G A 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,28,0
- chr21 1689008 . T G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:3,10:0.71429:deepvariant:2,10,0
- chr21 1713387 . C A 24.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:24,23,0
- chr21 1713589 . C T 20 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:19,25,0
- chr21 1713616 . A C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,21,0
- chr21 1713693 . C A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,29,0
- chr21 1713719 . G C 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,26,0
- chr21 1713807 . T A 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:22,21,0
- chr21 1713973 . T A 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:21,21,0
- chr21 1714088 . A G 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:20,24,0
- chr21 1714134 . C A 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:20,27,0
- chr21 1714146 . T A 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,24,0
- chr21 1714219 . C T 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:18,22,0
- chr21 1714637 . A C 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,29,0
- chr21 1714726 . T A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:15,25,0
- chr21 1714738 . A C 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:18,28,0
- chr21 1714787 . A T 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,3:1.00000:small_model:20,26,0
- chr21 1811111 . G A 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:deepvariant:11,18,0
- chr21 1827399 . G T 23.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:small_model:23,26,0
- chr21 1827773 . G A 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:1,5:0.83333:deepvariant:14,17,0
- chr21 1827851 . T G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:1,5:0.83333:deepvariant:12,15,0
- chr21 1893578 . T A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:6,8:0.57143:deepvariant:2,0,2
- chr21 1893579 . A G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:6,8:0.57143:deepvariant:2,0,3
- chr21 1893636 . A C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:14:5,9:0.64286:deepvariant:2,7,0
- chr21 1893646 . A C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:14:5,9:0.64286:deepvariant:1,3,0
- chr21 1893674 . T A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:15:6,8:0.53333:deepvariant:0,0,2
- chr21 1893721 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:15:6,9:0.60000:deepvariant:2,0,0
- chr21 1893743 . A T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:15:6,9:0.60000:deepvariant:2,0,0
- chr21 1893745 . A T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:6,9:0.60000:deepvariant:3,0,1
- chr21 1893747 . T A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:15:6,9:0.60000:deepvariant:1,0,0
- chr21 1893766 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:15:6,9:0.60000:deepvariant:0,0,0
- chr21 1893862 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:7,9:0.56250:deepvariant:3,0,2
- chr21 1893882 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:16:8,8:0.50000:deepvariant:0,3,0
- chr21 1893894 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:16:8,8:0.50000:deepvariant:0,4,0
- chr21 1893908 . C A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:17:9,8:0.47059:deepvariant:0,3,0
- chr21 1893927 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:9,8:0.47059:deepvariant:2,0,6
- chr21 1940605 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:13,8:0.38095:deepvariant:0,0,14
- chr21 1941520 . T G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:26:16,10:0.38462:deepvariant:1,0,11
- chr21 1941569 . A C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:26:8,18:0.69231:deepvariant:1,1,0
- chr21 1941570 . T C 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:26:8,18:0.69231:deepvariant:5,0,2
- chr21 1950381 . A T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:8:1,4:0.50000:deepvariant:8,26,0
- chr21 1950422 . T A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:8:1,6:0.75000:deepvariant:6,22,0
- chr21 1950451 . G C 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:8:0,8:1.00000:small_model:22,27,0
- chr21 1950471 . G T 22.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:8:0,8:1.00000:small_model:22,25,0
- chr21 1950483 . G C 14.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:8:0,7:0.87500:small_model:14,18,0
- chr21 1950506 . A C 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:8:0,8:1.00000:small_model:20,19,0
- chr21 1950530 . T A 24.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:8:0,8:1.00000:small_model:24,25,0
- chr21 1950538 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:4,4:0.50000:deepvariant:1,9,0
- chr21 1950623 . G T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:9:4,5:0.55556:deepvariant:3,8,0
- chr21 1950657 . T A 18.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:9:0,8:0.88889:small_model:18,20,0
- chr21 1950744 . C T 29 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:8:0,8:1.00000:small_model:28,27,0
- chr21 1950770 . A T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:9:1,8:0.88889:deepvariant:12,19,0
- chr21 1950828 . T C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:7:1,6:0.85714:small_model:13,14,0
- chr21 2662220 . G A 13.227 PASS FAU=2;FCU=0;FGU=0;FTU=0;RAU=6;RCU=0;RGU=1;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:9:0.8889:0,8:0:7:0,0:8:0:1:0:0:0:7:0
- chr21 2698028 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:1,14,0
- chr21 2698039 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:0,9,0
- chr21 2698049 . A C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:3,13,0
- chr21 2698054 . A G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:3,12,0
- chr21 2698063 . C A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:3,14,0
- chr21 2698106 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:0,8,0
- chr21 2698110 . G A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:0,8,0
- chr21 2698139 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:1,12,0
- chr21 2698203 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:2,4:0.66667:deepvariant:1,6,0
- chr21 5963705 . C T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:6,15,0
- chr21 5963717 . T C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,15,0
- chr21 5963725 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,9,0
- chr21 5963727 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,8,0
- chr21 5963740 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,9,0
- chr21 5963745 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,9,0
- chr21 6224982 . G A 10.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:6:6:3,3:0.50000:8,6,0
- chr21 6232022 . A C 30 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:0.33333:deepvariant:29,35,24
- chr21 6303136 . T A 21.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:21,18,0
- chr21 6315976 . T G 13.48 PASS H;FAU=0;FCU=0;FGU=4;FTU=4;RAU=0;RCU=0;RGU=3;RTU=2 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:13:0.5385:0,7:0:19:0,0:0:0:7:6:0:0:0:19
- chr21 6317332 . A G 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:8:3,5:0.62500:small_model:17,0,45
- chr21 6317694 . C T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:5:3,2:0.40000:small_model:9,0,18
- chr21 6422106 . G C 13.041 PASS H;FAU=0;FCU=6;FGU=25;FTU=0;RAU=0;RCU=8;RGU=20;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:59:0.2373:0,14:0.0476:21:0,1:0:14:45:0:0:1:20:0
- chr21 6457249 . G C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:13:2:0,2:1.00000:small_model:0,29,10
- chr21 6457769 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,15,0
- chr21 6658920 . G A 15.443 PASS H;FAU=4;FCU=0;FGU=5;FTU=0;RAU=3;RCU=0;RGU=5;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:15:17:0.4118:0,7:0:14:0,0:7:0:10:0:0:0:14:0
- chr21 6659618 . G C 13.665 PASS H;FAU=0;FCU=2;FGU=5;FTU=0;RAU=0;RCU=2;RGU=6;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:15:0.2667:0,4:0:11:0,0:0:4:11:0:0:0:11:0
- chr21 6660128 . C T 11.53 PASS H;FAU=0;FCU=5;FGU=0;FTU=4;RAU=0;RCU=5;RGU=0;RTU=4 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:18:0.4444:0,8:0:12:0,0:0:10:0:8:0:12:0:0
- chr21 6660165 . G A 16.112 PASS H;FAU=4;FCU=0;FGU=4;FTU=0;RAU=4;RCU=0;RGU=7;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:16:19:0.4211:0,8:0:12:0,0:8:0:11:0:0:0:12:0
- chr21 6660485 . A G 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:24:15,8:0.33333:small_model:14,0,43
- chr21 6660601 . A C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:26:13,13:0.50000:small_model:9,0,21
- chr21 6660826 . C G 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:27:17,9:0.33333:small_model:14,0,31
- chr21 6748998 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,11,0
- chr21 6750457 . C A 24.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:0,8:0.25000:deepvariant:23,31,5
- chr21 6763930 . C A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:5,2:0.28571:deepvariant:5,0,12
- chr21 6764104 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:7,2:0.20000:deepvariant:4,0,12
- chr21 6797940 . C A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:2,24,0
- chr21 6809068 . G A 19.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:19,13,0
- chr21 6824640 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,16,0
- chr21 6825791 . A T 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,25,0
- chr21 6834457 . G A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:20:7,11:0.55000:deepvariant:3,4,0
- chr21 6849909 . T A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:13:2:0,2:1.00000:small_model:0,22,3
- chr21 6851078 . G A 22.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:22:7:0,7:1.00000:small_model:3,28,0
- chr21 6888435 . T A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:9:7,2:0.22222:deepvariant:5,0,11
- chr21 7049129 . G A 23 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:23:9:4,5:0.55556:deepvariant:22,0,34
- chr21 7112422 . C G 22 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:21,10,0
- chr21 7151637 . C G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:9:7,2:0.22222:small_model:9,0,40
- chr21 7200772 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,13,0
- chr21 7209012 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,6:1.00000:deepvariant:0,16,0
- chr21 7225143 . T G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:1,21,0
- chr21 7225151 . C A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:10,24,0
- chr21 7225210 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,5:1.00000:deepvariant:0,21,0
- chr21 7225390 . G A 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:20,16,0
- chr21 7225415 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,16,0
- chr21 7225416 . C T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,19,0
- chr21 7225419 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,19,0
- chr21 7225424 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,3:0.75000:deepvariant:1,19,0
- chr21 7225443 . T G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:0,20,0
- chr21 7225501 . C A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,13,0
- chr21 7225503 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,3:0.75000:deepvariant:2,16,0
- chr21 7225506 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,15,0
- chr21 7225524 . G C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,18,0
- chr21 7225719 . C A 23.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:23,19,0
- chr21 7225721 . C T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,11,0
- chr21 7225797 . A C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:16,17,0
- chr21 7279171 . C A 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:19,35,0
- chr21 7291915 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,19,0
- chr21 7292649 . A C 19.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:7:0,7:1.00000:small_model:19,28,0
- chr21 7297448 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:0,14,0
- chr21 7297573 . G A 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:6,18,0
- chr21 7297602 . T G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,17,0
- chr21 7297852 . C G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,2:0.50000:deepvariant:1,17,0
- chr21 7297911 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,14,0
- chr21 7297915 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,3:0.60000:small_model:0,15,0
- chr21 7298037 . T C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,3:0.60000:deepvariant:8,34,0
- chr21 7298142 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:1,11,0
- chr21 7298352 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:2,21,0
- chr21 7298429 . C A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:10,21,0
- chr21 7298487 . T A 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,6:1.00000:deepvariant:0,22,0
- chr21 7298520 . C G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,5:0.71429:deepvariant:0,19,0
- chr21 7299129 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:0,3:0.50000:deepvariant:0,24,0
- chr21 7304818 . A C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,3:0.75000:deepvariant:3,20,0
- chr21 7305022 . A T 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:13,25,0
- chr21 7312441 . T C 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,20,0
- chr21 7376430 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:14,9:0.39130:deepvariant:0,0,7
- chr21 7377548 . A T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:2,7:0.77778:deepvariant:5,8,0
- chr21 7378672 . C G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:8:0,6:0.75000:small_model:16,17,0
- chr21 7379341 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:12:4,8:0.66667:deepvariant:3,4,0
- chr21 7685716 . G T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,4:0.80000:small_model:9,16,0
- chr21 7691221 . T A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:deepvariant:12,10,0
- chr21 7695301 . C T 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:16,8,0
- chr21 7695517 . C G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:8,6,0
- chr21 7752648 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:2,3:0.42857:deepvariant:0,15,0
- chr21 7753604 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:3,3:0.50000:deepvariant:0,13,0
- chr21 7753698 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:1,13,0
- chr21 7753870 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,16,0
- chr21 7753895 . G A 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:0,8:1.00000:deepvariant:5,18,0
- chr21 7754331 . C T 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:8:0,8:1.00000:small_model:21,22,0
- chr21 7754424 . G C 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:10,18,0
- chr21 7754822 . T C 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:13:1,11:0.84615:small_model:19,14,0
- chr21 7754831 . C A 16.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:13:2,11:0.84615:small_model:15,12,0
- chr21 7757767 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:0,2:0.20000:deepvariant:0,14,0
- chr21 8873649 . T C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:5,14:0.73684:deepvariant:10,0,7
- chr21 8942259 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:36:22,14:0.38889:deepvariant:2,0,18
- chr21 9445219 . C G 6 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:37:29,8:0.21622:4,11,0
- chr21 9446259 . G T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:31:23,8:0.25806:deepvariant:6,0,32
- chr21 9446260 . C T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:31:24,7:0.22581:deepvariant:2,0,28
- chr21 10864140 . T C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:37:22,15:0.40541:deepvariant:11,0,19
- chr21 16114596 . G T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:28:3,13:0.46429:deepvariant:2,0,24
- chr21 16677474 . C T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:15:42:19,22:0.52381:small_model:7,0,28
- chr21 37108365 . C T 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:40:25,15:0.37500:small_model:24,0,40
- chr21 38361594 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:35:19,16:0.45714:deepvariant:0,0,24
- chr21 39701820 . C G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:31:24,7:0.22581:deepvariant:13,0,28
- chr21 39863695 . G T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:19:5:2,2:0.40000:small_model:18,0,30
- chr21 39863707 . A T 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:19,17,0
- chr21 39863754 . C G 36.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:36,17,0
- chr21 39863781 . A G 37.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:37,18,0
- chr21 39864219 . G A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:2,5,0
- chr21 39864269 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,11,0
- chr21 39864272 . T C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:2,6,0
- chr21 39864284 . T G 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:5,9,0
- chr21 42503498 . T A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:9,3:0.25000:small_model:9,0,32
- chr21 42750537 . A C 38.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:9:0,9:0.33333:deepvariant:38,32,20
- chr21 42750547 . C G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:11:5,6:0.54545:deepvariant:1,0,0
- chr21 43050129 . A G 19.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:32:1,5:0.15625:deepvariant:18,11,50
- chr21 43345472 . T C 9.986 PASS H;FAU=0;FCU=11;FGU=0;FTU=5;RAU=0;RCU=12;RGU=0;RTU=4 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:32:0.7188:0,23:0:4:0,0:0:23:0:9:0:0:0:4
- chr21 43345855 . A C 22 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:32:6,26:0.81250:19,0,0
- chr21 43353171 . T A 21.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:21:6:4,2:0.33333:small_model:21,0,43
- chr21 43865663 . C T 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:8,2:0.20000:small_model:8,0,34
- chr21 43865724 . C T 24.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:24:10:7,3:0.30000:small_model:24,0,43
- chr21 44002804 . T C 22.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:21,11,0
- chr21 44002845 . C T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:14,10,0
- chr21 44283376 . G C 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:17:13,4:0.23529:deepvariant:7,0,22
- chr21 44283377 . G C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:18:13,5:0.27778:deepvariant:7,0,19
- chr21 44283585 . A C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:12:7:4,2:0.28571:small_model:0,1,41
- chr21 44300645 . T C 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:5,9,0
- chr21 44300657 . C A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,3:0.60000:deepvariant:2,4,0
- chr21 44300662 . A G 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:15,23,0
- chr21 44300693 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:4:2,2:0.50000:deepvariant:1,1,0
- chr21 44300704 . T C 22.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:4:0,4:1.00000:small_model:22,27,0
- chr21 44300711 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:9,14,0
- chr21 44300723 . C A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,2:0.66667:deepvariant:1,3,0
- chr21 44363093 . C T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:5:2,2:0.40000:small_model:16,0,16
- chr21 44365484 . C T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:10,12,0
- chr21 44365537 . A G 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,14,0
- chr21 44550042 . G A 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:12:8,4:0.33333:small_model:15,0,41
- chr21 44550890 . A G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:17:11:7,3:0.27273:small_model:16,0,41
- chr21 44550891 . T C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:11:7,4:0.36364:small_model:14,0,29
- chr21 44552234 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:17:11,6:0.35294:deepvariant:8,0,30
- chr21 44552274 . A G 25.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:16:12,4:0.25000:small_model:25,0,53
- chr21 44552289 . A G 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:22:17:11,5:0.29412:small_model:21,0,47
- chr21 44676630 . G A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:32:18,14:0.43750:deepvariant:3,0,19
- chr21 44679034 . G A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:35:23,12:0.34286:deepvariant:8,0,17
- chr21 44679090 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:23:16,6:0.26087:deepvariant:3,0,15
- chr21 44679092 . T A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:22:15,6:0.27273:deepvariant:3,0,16
- chr21 44679182 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:22:7,15:0.68182:deepvariant:13,0,15
- chr21 44679238 . G A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:22:14,8:0.36364:deepvariant:9,0,14
- chr21 44679240 . A T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:24:13,8:0.33333:deepvariant:13,0,13
- chr21 44679462 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:33:21,12:0.36364:deepvariant:1,0,13
- chr21 44679664 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:36:28,8:0.22222:deepvariant:1,0,15
- chr21 44881418 . C T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:29:25,4:0.13793:deepvariant:2,0,25
- chr22 325340 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:1,0,15
- chr22 325344 . C G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:8,4:0.33333:deepvariant:1,0,13
- chr22 325724 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:10,4:0.28571:deepvariant:1,0,14
- chr22 335709 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:6,2:0.25000:deepvariant:0,0,14
- chr22 336225 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:8:2,6:0.75000:deepvariant:2,0,4
- chr22 336364 . G C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:8:2,6:0.75000:deepvariant:4,0,7
- chr22 340001 . C G 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:16,18,0
- chr22 340053 . C G 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:5:0,5:1.00000:small_model:19,19,0
- chr22 340061 . T C 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:7,4,0
- chr22 340065 . C G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:4,4,0
- chr22 345314 . A C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:13,7:0.14286:deepvariant:5,0,34
- chr22 345378 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:15,3:0.14286:deepvariant:1,0,21
- chr22 345890 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:23:16,5:0.21739:deepvariant:1,0,19
- chr22 346466 . G C 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:25:15,6:0.24000:deepvariant:12,0,30
- chr22 568738 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:7,4:0.36364:deepvariant:0,0,14
- chr22 568772 . G T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:6,5:0.45454:deepvariant:1,0,12
- chr22 569520 . A C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:13,4:0.23529:deepvariant:3,0,18
- chr22 569582 . A T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:14,3:0.17647:deepvariant:0,0,19
- chr22 569588 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:13,4:0.23529:deepvariant:1,0,17
- chr22 570087 . A C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:15,4:0.21053:deepvariant:2,0,24
- chr22 570233 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:20:14,6:0.30000:small_model:9,0,20
- chr22 570298 . T G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:14,6:0.30000:deepvariant:4,0,18
- chr22 570334 . C G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:12,7:0.36842:deepvariant:1,0,12
- chr22 570335 . T A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:12,7:0.36842:deepvariant:1,0,14
- chr22 570357 . T C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:12,7:0.36842:deepvariant:6,0,15
- chr22 570408 . G C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:12,7:0.36842:deepvariant:4,0,15
- chr22 570409 . A T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:19:12,7:0.36842:deepvariant:3,0,15
- chr22 570441 . T A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:19:11,7:0.36842:small_model:9,0,18
- chr22 570445 . T A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:21:12,9:0.42857:deepvariant:6,0,17
- chr22 573973 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:12,3:0.20000:deepvariant:2,0,21
- chr22 588660 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:29:22,7:0.24138:deepvariant:0,0,17
- chr22 588756 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:29:20,9:0.31034:deepvariant:1,0,15
- chr22 588846 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:28:19,8:0.28571:deepvariant:3,0,15
- chr22 588978 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:28:19,9:0.32143:deepvariant:0,0,17
- chr22 589086 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:30:21,9:0.30000:deepvariant:0,0,16
- chr22 589260 . G C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:32:21,11:0.34375:deepvariant:3,0,14
- chr22 653819 . G T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:9,4:0.30769:deepvariant:0,0,18
- chr22 653869 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:2,0,18
- chr22 653917 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:9,4:0.30769:deepvariant:1,0,19
- chr22 654490 . G A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:8,5:0.38462:deepvariant:1,0,16
- chr22 655342 . G T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:8,4:0.33333:deepvariant:1,0,17
- chr22 655852 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,18
- chr22 656084 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:10,4:0.28571:deepvariant:0,0,19
- chr22 794620 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:11,6:0.35294:deepvariant:0,0,18
- chr22 794695 . C A 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:17:7,9:0.52941:deepvariant:10,0,24
- chr22 794962 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:8,7:0.46667:deepvariant:0,0,19
- chr22 795022 . T A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:7,7:0.50000:deepvariant:3,0,17
- chr22 795239 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:12,3:0.20000:deepvariant:1,0,21
- chr22 795344 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:9,6:0.40000:deepvariant:0,0,17
- chr22 795634 . A C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:12:8,4:0.33333:deepvariant:6,0,23
- chr22 795674 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:9,3:0.25000:deepvariant:3,0,23
- chr22 827040 . C G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:21:12,9:0.42857:deepvariant:0,0,20
- chr22 891424 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:8,4:0.33333:deepvariant:1,0,16
- chr22 891662 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:8,2:0.20000:deepvariant:3,0,15
- chr22 891739 . C A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:8,2:0.20000:deepvariant:0,0,18
- chr22 966247 . A C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:20:11,9:0.45000:deepvariant:3,0,10
- chr22 966369 . A G 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:19:10,9:0.47368:deepvariant:7,0,10
- chr22 966454 . C G 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:10,10:0.50000:deepvariant:3,0,6
- chr22 966465 . A C 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:10,10:0.50000:deepvariant:5,0,4
- chr22 966627 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:9,6:0.37500:deepvariant:1,0,12
- chr22 966672 . T G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:8,9:0.52941:deepvariant:3,0,4
- chr22 966742 . T A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:17:8,9:0.52941:deepvariant:9,0,7
- chr22 966880 . T G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:17:9,8:0.47059:deepvariant:4,0,7
- chr22 966997 . A G 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:5,9:0.64286:deepvariant:6,0,9
- chr22 967051 . G T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:6,6:0.50000:deepvariant:1,0,10
- chr22 967052 . C T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:6,6:0.50000:deepvariant:3,0,9
- chr22 967436 . A G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:6,6:0.50000:deepvariant:5,0,8
- chr22 967709 . C G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:6,6:0.50000:deepvariant:4,0,6
- chr22 967770 . T A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:6,6:0.50000:deepvariant:3,0,6
- chr22 968063 . G C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:6,7:0.53846:deepvariant:5,0,10
- chr22 968113 . A C 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:6,7:0.53846:deepvariant:5,0,10
- chr22 968375 . A G 7.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:13:7,6:0.46154:deepvariant:6,0,7
- chr22 987900 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:27:23,4:0.14815:deepvariant:0,0,20
- chr22 988924 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:31:24,7:0.22581:deepvariant:0,0,17
- chr22 989354 . G C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:29:22,7:0.24138:deepvariant:4,0,19
- chr22 1001642 . T C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:34:19,15:0.44118:deepvariant:6,0,18
- chr22 1023042 . T G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:4,8:0.66667:deepvariant:12,0,2
- chr22 1023637 . T A 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:10,6:0.37500:deepvariant:5,0,7
- chr22 1043850 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:12,3:0.20000:deepvariant:3,0,19
- chr22 1043896 . C G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:12,3:0.20000:deepvariant:3,0,19
- chr22 1055174 . G C 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:16,2:0.11111:deepvariant:0,0,19
- chr22 1055312 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:17,2:0.10526:deepvariant:1,0,18
- chr22 1111216 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,12
- chr22 1119865 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:1,0,3
- chr22 1120729 . A T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:1,0,6
- chr22 1123423 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:4,3:0.42857:deepvariant:0,0,8
- chr22 1186463 . C G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:41:19,21:0.51219:deepvariant:3,0,12
- chr22 1186475 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:41:19,22:0.53658:deepvariant:0,0,8
- chr22 1186770 . G C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:39:18,21:0.53846:deepvariant:6,0,10
- chr22 1264554 . G C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:9:4,4:0.44444:deepvariant:1,0,0
- chr22 1264803 . G T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:8:3,4:0.50000:deepvariant:0,2,0
- chr22 1290682 . G A 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:3,5:0.55556:deepvariant:3,1,0
- chr22 1291063 . T A 15.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:14,9,0
- chr22 1291121 . A T 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:17,10,0
- chr22 1291225 . C G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:2,6:0.75000:deepvariant:9,0,0
- chr22 1291227 . T A 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:3,6:0.66667:deepvariant:10,0,0
- chr22 1291317 . T A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:9:4,5:0.55556:deepvariant:0,3,0
- chr22 1291411 . C G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,4:0.44444:deepvariant:5,0,2
- chr22 1291412 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:3,5:0.55556:deepvariant:6,0,0
- chr22 1291568 . C A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:0,0,3
- chr22 1291643 . A G 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:6,6:0.50000:deepvariant:6,0,4
- chr22 1296555 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:2,2:0.50000:deepvariant:0,0,7
- chr22 1297203 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:4:2,2:0.50000:deepvariant:0,0,7
- chr22 1328635 . G T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:12,2:0.14286:deepvariant:2,0,20
- chr22 1328690 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:14:12,2:0.14286:deepvariant:0,0,18
- chr22 1373876 . C G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,23,0
- chr22 1386651 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:13:7,6:0.46154:deepvariant:0,0,1
- chr22 1386679 . T C 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:13:5,6:0.46154:small_model:5,0,1
- chr22 1389804 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,4:0.22222:deepvariant:2,0,21
- chr22 1389947 . A C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,4:0.22222:deepvariant:1,0,21
- chr22 1390089 . G T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:12,4:0.25000:deepvariant:1,0,21
- chr22 1390152 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:14,5:0.26316:deepvariant:4,0,18
- chr22 1404046 . A T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:11,6:0.35294:deepvariant:0,0,14
- chr22 1404342 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:11,8:0.42105:deepvariant:4,0,15
- chr22 1404703 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:9,7:0.43750:deepvariant:4,0,14
- chr22 1404970 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:12,3:0.20000:deepvariant:0,0,15
- chr22 1458939 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:19,4:0.17391:deepvariant:0,0,20
- chr22 1553977 . C A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:8,6:0.42857:deepvariant:5,0,12
- chr22 1554558 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:16,2:0.11111:deepvariant:0,0,14
- chr22 1554614 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:15,3:0.16667:deepvariant:0,0,12
- chr22 1554740 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:13,3:0.18750:deepvariant:1,0,13
- chr22 1554805 . T A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:14,3:0.17647:deepvariant:0,0,12
- chr22 1554991 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:13,3:0.18750:deepvariant:1,0,13
- chr22 1555024 . G T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:13,3:0.18750:deepvariant:2,0,13
- chr22 1572902 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:1,0,3
- chr22 1652190 . T C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:2,0,12
- chr22 1652356 . G C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:11:6,5:0.45454:deepvariant:9,0,14
- chr22 1652556 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:9:3,6:0.66667:deepvariant:10,0,9
- chr22 1652604 . A G 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:10:4,6:0.60000:deepvariant:10,0,11
- chr22 1652714 . C G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:12:7,5:0.41667:deepvariant:8,0,16
- chr22 1653148 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:2:20:9,11:0.55000:deepvariant:1,0,2
- chr22 1653492 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:9,10:0.52632:deepvariant:8,0,7
- chr22 1654695 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:11,4:0.25000:deepvariant:0,0,11
- chr22 1654709 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,4:0.28571:deepvariant:2,0,12
- chr22 1654875 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:13,4:0.23529:deepvariant:1,0,16
- chr22 1706564 . T C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:15:11,4:0.26667:deepvariant:8,0,19
- chr22 1779126 . G A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:17,9:0.34615:deepvariant:1,0,22
- chr22 1779145 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:27:18,9:0.33333:deepvariant:0,0,21
- chr22 1779211 . G C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:26:17,9:0.34615:deepvariant:0,0,21
- chr22 1966139 . T C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:12,5:0.27778:deepvariant:2,0,18
- chr22 2035900 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:7,6:0.46154:deepvariant:1,0,11
- chr22 2053387 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,4:0.40000:deepvariant:1,0,12
- chr22 2053395 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:10:6,4:0.40000:deepvariant:0,0,12
- chr22 2053402 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:6,4:0.40000:deepvariant:1,0,13
- chr22 2053469 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:2,0,15
- chr22 2053481 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:7,4:0.36364:deepvariant:1,0,15
- chr22 2053578 . A C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:10:7,3:0.30000:deepvariant:3,0,20
- chr22 2156357 . G C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:11,6:0.35294:deepvariant:2,0,22
- chr22 2184084 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:2,17,0
- chr22 2184141 . G T 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:4:1,3:0.75000:deepvariant:8,0,1
- chr22 2233853 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:8,2:0.20000:deepvariant:2,0,16
- chr22 2234025 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:8,3:0.27273:deepvariant:1,0,15
- chr22 2234102 . G C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:10,3:0.23077:deepvariant:2,0,20
- chr22 2907056 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:16:11,5:0.31250:deepvariant:1,0,10
- chr22 4406906 . A G 9.432 PASS H;FAU=5;FCU=0;FGU=1;FTU=0;RAU=8;RCU=0;RGU=3;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:17:0.2353:0,4:0:9:0,0:13:0:4:0:9:0:0:0
- chr22 4407188 . T C 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:17:11,6:0.35294:small_model:10,0,41
- chr22 4407261 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:16:11,5:0.31250:0,7,0
- chr22 4407694 . T A 9.571 PASS H;FAU=1;FCU=0;FGU=0;FTU=4;RAU=3;RCU=0;RGU=0;RTU=5 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:13:0.3077:0,4:0:9:0,0:4:0:0:9:0:0:0:9
- chr22 5725644 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:34:31,3:0.08824:1,24,0
- chr22 5725788 . C A 10.134 PASS H;FAU=2;FCU=13;FGU=0;FTU=0;RAU=1;RCU=11;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:10:27:0.1111:0,3:0:21:0,0:3:24:0:0:0:21:0:0
- chr22 5820106 . G A 20.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:20:54:45,8:0.14815:20,31,0
- chr22 6043328 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:34:30,4:0.11765:1,29,0
- chr22 6079597 . T A 14.797 PASS H;FAU=4;FCU=0;FGU=0;FTU=12;RAU=6;RCU=0;RGU=0;RTU=14 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:14:36:0.2778:0,10:0:22:0,0:10:0:0:26:0:0:0:22
- chr22 6099430 . C T 16.642 PASS H;FAU=0;FCU=11;FGU=0;FTU=6;RAU=0;RCU=12;RGU=0;RTU=7 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:16:36:0.3611:0,13:0.0526:19:0,1:0:23:0:13:0:18:0:1
- chr22 6155339 . G A 8.115 PASS FAU=2;FCU=0;FGU=18;FTU=0;RAU=2;RCU=0;RGU=10;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:32:0.125:0,4:0:18:0,0:4:0:28:0:0:0:18:0
- chr22 6233717 . G C 7.5 PASS . GT:GQ:DP:AD:VAF:PL 1/1:4:40:32,8:0.20000:4,3,0
- chr22 6416600 . G A 11.32 PASS FAU=5;FCU=0;FGU=12;FTU=0;RAU=2;RCU=0;RGU=15;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:34:0.2059:0,7:0.0435:23:0,1:7:0:27:0:1:0:22:0
- chr22 6536474 . T C 16.964 PASS H;FAU=0;FCU=11;FGU=0;FTU=10;RAU=0;RCU=8;RGU=0;RTU=7 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:16:36:0.5278:0,19:0.0588:17:0,1:0:19:0:17:0:1:0:16
- chr22 6536956 . G A 18.449 PASS H;FAU=11;FCU=0;FGU=13;FTU=0;RAU=8;RCU=0;RGU=7;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:18:39:0.4872:0,19:0.0556:18:0,1:19:0:20:0:1:0:17:0
- chr22 6537077 . T C 16.628 PASS FAU=0;FCU=12;FGU=0;FTU=12;RAU=0;RCU=8;RGU=0;RTU=8 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:16:40:0.5:0,20:0.0556:18:0,1:0:20:0:20:0:1:0:17
- chr22 6735215 . C A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:15,2:0.11765:deepvariant:2,0,35
- chr22 6735297 . A G 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:18:15,2:0.11111:deepvariant:6,0,36
- chr22 6735304 . T G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:18:16,2:0.11111:deepvariant:8,0,39
- chr22 6735727 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:16,2:0.11111:deepvariant:2,0,24
- chr22 7144166 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,8,0
- chr22 7508769 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:15:11,4:0.26667:deepvariant:0,0,25
- chr22 7509333 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:14,5:0.26316:deepvariant:0,0,25
- chr22 7509657 . C A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:13,4:0.22222:deepvariant:0,0,24
- chr22 7516270 . C G 9.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:5:22:15,7:0.31818:7,5,0
- chr22 7518651 . G C 13.728 PASS H;FAU=0;FCU=5;FGU=7;FTU=0;RAU=0;RCU=8;RGU=9;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:29:0.4483:0,13:0.0714:14:0,1:0:13:16:0:0:1:13:0
- chr22 7519153 . C T 11.421 PASS H;FAU=0;FCU=4;FGU=0;FTU=7;RAU=0;RCU=9;RGU=0;RTU=8 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:11:28:0.5357:0,15:0.0769:13:0,1:0:13:0:15:0:12:0:1
- chr22 7519412 . A G 13.379 PASS H;FAU=5;FCU=0;FGU=6;FTU=0;RAU=9;RCU=0;RGU=7;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:27:0.4815:0,13:0.0625:16:0,1:14:0:13:0:15:0:1:0
- chr22 7864019 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:1,11,0
- chr22 7864024 . A T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,11,0
- chr22 7996072 . G A 13.515 PASS H;FAU=8;FCU=0;FGU=1;FTU=0;RAU=3;RCU=0;RGU=5;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:17:0.6471:0,11:0:6:0,0:11:0:6:0:0:0:6:0
- chr22 8033325 . A G 9.299 PASS H;FAU=4;FCU=0;FGU=5;FTU=0;RAU=8;RCU=0;RGU=1;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:9:18:0.3333:0,6:0:7:0,0:12:0:6:0:7:0:0:0
- chr22 8205508 . A G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:12,2:0.14286:small_model:9,0,38
- chr22 8408342 . T C 13.54 PASS H;FAU=0;FCU=4;FGU=0;FTU=14;RAU=0;RCU=2;RGU=0;RTU=6 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:26:0.2308:0,6:0:15:0,0:0:6:0:20:0:0:0:15
- chr22 9429848 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:24:19,4:0.16667:deepvariant:6,0,42
- chr22 9481746 . A T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:26:14,12:0.46154:deepvariant:1,0,21
- chr22 9545197 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:11,9:0.45000:deepvariant:5,0,26
- chr22 9545475 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:20:10,10:0.50000:deepvariant:8,0,27
- chr22 9545558 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:21:11,10:0.47619:deepvariant:1,0,22
- chr22 9545658 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:23:12,11:0.47826:deepvariant:3,0,24
- chr22 9545699 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:12,11:0.47826:deepvariant:0,0,24
- chr22 9545743 . C A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:23:12,11:0.47826:deepvariant:1,0,24
- chr22 9545770 . T C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:12,11:0.47826:deepvariant:4,0,25
- chr22 9545941 . G T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:20:10,10:0.50000:deepvariant:2,0,24
- chr22 9545966 . A G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:19:9,10:0.52632:deepvariant:8,0,26
- chr22 9546035 . C T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:20:9,11:0.55000:deepvariant:6,0,25
- chr22 9546066 . A G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:19:9,10:0.52632:deepvariant:8,0,26
- chr22 9546169 . G A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:18:8,10:0.55556:deepvariant:4,0,20
- chr22 9546183 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:8,10:0.55556:deepvariant:2,0,20
- chr22 9546211 . T A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:18:8,10:0.55556:deepvariant:3,0,23
- chr22 9546479 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:18:10,8:0.44444:deepvariant:5,0,22
- chr22 9546503 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:10,8:0.44444:deepvariant:2,0,24
- chr22 9546575 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:17:9,8:0.47059:deepvariant:4,0,23
- chr22 9546587 . A C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:17:9,8:0.47059:deepvariant:5,0,25
- chr22 9546685 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:7,8:0.50000:deepvariant:2,0,22
- chr22 9546693 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:8,8:0.50000:deepvariant:2,0,22
- chr22 9546716 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:9,8:0.47059:deepvariant:2,0,23
- chr22 9547186 . G T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:12:7,5:0.41667:deepvariant:5,0,25
- chr22 9547323 . T G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:6,5:0.45454:deepvariant:4,0,22
- chr22 9547465 . A T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:14:9,5:0.35714:deepvariant:2,0,25
- chr22 9547745 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:8,5:0.38462:deepvariant:2,0,24
- chr22 9547842 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:8,4:0.33333:deepvariant:3,0,25
- chr22 10772128 . G C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:9,3:0.25000:deepvariant:2,0,13
- chr22 10772891 . T A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:18:14,4:0.22222:deepvariant:1,0,17
- chr22 10780870 . T A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,17,0
- chr22 10780871 . C G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,18,0
- chr22 10809257 . G A 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:23:11,12:0.52174:deepvariant:15,0,15
- chr22 10809520 . T C 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:19:8,11:0.57895:small_model:12,0,17
- chr22 10809809 . A G 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:20:8,12:0.60000:small_model:15,0,14
- chr22 11111761 . A G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:33:17,16:0.48485:deepvariant:1,0,22
- chr22 11111999 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:42:23,18:0.42857:deepvariant:5,0,22
- chr22 11112174 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:38:28,10:0.26316:deepvariant:1,0,22
- chr22 11112884 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:39:28,10:0.25641:deepvariant:3,0,23
- chr22 11113453 . G A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:42:31,11:0.26191:deepvariant:2,0,22
- chr22 11275177 . C A 13.079 PASS H;FAU=3;FCU=17;FGU=0;FTU=0;RAU=4;RCU=10;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:13:34:0.2059:0,7:0.0385:26:0,1:7:27:0:0:1:25:0:0
- chr22 11275548 . A T 8.851 PASS H;FAU=16;FCU=0;FGU=0;FTU=5;RAU=9;RCU=0;RGU=0;RTU=5 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:35:0.2857:0,10:0.0417:24:0,1:25:0:0:10:23:0:0:1
- chr22 11554260 . T C 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:47:27,20:0.42553:deepvariant:10,0,15
- chr22 11554555 . G T 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:51:28,23:0.45098:deepvariant:9,0,10
- chr22 11555475 . C A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:42:26,16:0.38095:deepvariant:6,0,14
- chr22 11555495 . C A 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:42:26,16:0.38095:deepvariant:6,0,13
- chr22 11598496 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:11:4,7:0.63636:deepvariant:2,7,0
- chr22 11846191 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:PL 1/1:3:27:15,12:0.44444:1,3,0
- chr22 11847816 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:PL 1/1:2:33:19,14:0.42424:0,2,0
- chr22 11912683 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,24,0
- chr22 12485135 . A C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:21:9,12:0.57143:deepvariant:14,0,10
- chr22 12485497 . G C 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:23:11,12:0.52174:deepvariant:14,0,15
- chr22 12676707 . G C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:36:18,18:0.50000:small_model:14,0,18
- chr22 12800086 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:14,9:0.39130:deepvariant:1,0,9
- chr22 12874736 . C G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:10,5:0.33333:deepvariant:3,0,15
- chr22 12875854 . A G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:6,7:0.53846:deepvariant:4,0,10
- chr22 12978639 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:37:23,14:0.37838:deepvariant:0,0,6
- chr22 13028985 . G C 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:3,4:0.57143:deepvariant:7,13,0
- chr22 13029534 . T C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:2,11,0
- chr22 13029602 . G T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:3,4:0.57143:deepvariant:6,9,0
- chr22 13030674 . C G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:24:20,4:0.16667:deepvariant:0,0,14
- chr22 13030898 . T C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:25:18,5:0.20000:deepvariant:0,0,13
- chr22 13049101 . C T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:7:3,4:0.57143:deepvariant:1,0,6
- chr22 13049182 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:7:3,4:0.57143:deepvariant:4,0,9
- chr22 13064282 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:35:22,13:0.37143:deepvariant:1,0,17
- chr22 13066885 . G T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:17:10,5:0.29412:small_model:0,0,8
- chr22 13066941 . G T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:17:11,6:0.35294:deepvariant:1,0,10
- chr22 13067105 . C T 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:9,7:0.43750:deepvariant:3,0,3
- chr22 13398888 . T C 18.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:10:3,6:0.60000:deepvariant:18,15,0
- chr22 13399077 . A C 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:10:2,6:0.60000:deepvariant:12,12,0
- chr22 13399231 . T C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:10:2,8:0.80000:small_model:9,16,0
- chr22 13399312 . T C 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:9:1,7:0.77778:small_model:13,11,0
- chr22 14235595 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:2,0,16
- chr22 14236059 . T C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:6:3,3:0.50000:deepvariant:0,0,12
- chr22 14236378 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:4,3:0.42857:deepvariant:1,0,13
- chr22 14286868 . C A 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:6,6:0.46154:deepvariant:3,0,7
- chr22 14343444 . A G 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:11,7:0.36842:deepvariant:1,0,11
- chr22 14565874 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:4,6:0.60000:deepvariant:1,6,0
- chr22 14582639 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:18:10,8:0.44444:deepvariant:1,0,5
- chr22 14582730 . T G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:18:7,11:0.61111:deepvariant:2,10,0
- chr22 14672888 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:14:8,6:0.42857:deepvariant:5,0,12
- chr22 14673402 . C T 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,5:0.41667:deepvariant:1,0,8
- chr22 14673825 . C T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:10:7,2:0.20000:deepvariant:1,0,16
- chr22 14682112 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:31:20,11:0.35484:deepvariant:1,0,17
- chr22 14855485 . G C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:8,4:0.33333:deepvariant:1,0,11
- chr22 15110700 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:12,2:0.12500:small_model:0,0,19
- chr22 15123263 . C T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:7,8:0.53333:deepvariant:6,0,2
- chr22 15123301 . A T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:13:5,8:0.61538:deepvariant:7,0,2
- chr22 15123409 . G A 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:5,8:0.61538:deepvariant:13,0,4
- chr22 15123575 . A T 8.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:12:6,6:0.50000:deepvariant:6,0,3
- chr22 15123992 . G T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:7:4,3:0.42857:deepvariant:6,0,9
- chr22 15146416 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:6,2:0.25000:deepvariant:1,0,13
- chr22 15147163 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:7:5,2:0.28571:deepvariant:1,0,13
- chr22 15178480 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:12,3:0.20000:deepvariant:1,0,18
- chr22 15201631 . A G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:48:22,26:0.54167:deepvariant:6,0,13
- chr22 15201652 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:49:23,26:0.53061:deepvariant:4,0,13
- chr22 15201903 . A T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:48:22,25:0.52083:deepvariant:4,0,14
- chr22 15201973 . C G 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:48:21,27:0.56250:deepvariant:5,0,6
- chr22 15282402 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:13:9,4:0.30769:deepvariant:3,0,10
- chr22 15283045 . C G 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:10,5:0.33333:deepvariant:1,0,8
- chr22 15283109 . G T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:10,5:0.33333:deepvariant:3,0,11
- chr22 15283680 . A G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:16:9,7:0.43750:deepvariant:8,0,7
- chr22 15285544 . T A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:28:14,14:0.50000:deepvariant:11,0,17
- chr22 15300133 . G T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:21:11,10:0.47619:deepvariant:3,0,18
- chr22 15300255 . C A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:21:10,11:0.52381:deepvariant:4,0,18
- chr22 15300408 . A T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:23:9,12:0.52174:deepvariant:0,0,14
- chr22 15300807 . C A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:20:8,12:0.60000:deepvariant:5,0,15
- chr22 15335253 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:32:26,6:0.18750:deepvariant:2,0,22
- chr22 15363300 . A T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:19:8,11:0.57895:deepvariant:9,0,6
- chr22 15371673 . T C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:8:3,5:0.62500:deepvariant:0,4,0
- chr22 15375088 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:24:14,10:0.41667:deepvariant:4,0,9
- chr22 15375240 . G A 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:26:15,11:0.42308:deepvariant:2,0,16
- chr22 15414557 . A T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:11:7,4:0.36364:deepvariant:4,0,19
- chr22 15448321 . A C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:9:4,4:0.44444:deepvariant:0,0,13
- chr22 15448590 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:8:3,5:0.62500:deepvariant:6,0,19
- chr22 15448986 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:11:4,7:0.63636:deepvariant:0,0,8
- chr22 15449066 . G A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:11:4,7:0.63636:deepvariant:10,0,18
- chr22 15449162 . C G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:11:4,7:0.63636:deepvariant:5,0,14
- chr22 15449507 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:12:7,5:0.41667:deepvariant:0,0,13
- chr22 15449572 . C A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:12:5,7:0.58333:small_model:10,0,16
- chr22 15449709 . C T 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:14:6,8:0.57143:small_model:10,0,16
- chr22 15449814 . G T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:9,6:0.40000:deepvariant:1,0,15
- chr22 15450009 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:15:6,9:0.60000:deepvariant:1,0,13
- chr22 15467830 . G C 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:36:23,11:0.30556:deepvariant:4,0,7
- chr22 15467957 . C A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:38:27,11:0.28947:deepvariant:5,0,13
- chr22 15468009 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:37:27,10:0.27027:deepvariant:2,0,13
- chr22 15474312 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:9:6,2:0.22222:deepvariant:1,0,11
- chr22 15617942 . C G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:2,3:0.60000:deepvariant:3,12,0
- chr22 15617952 . G T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,3:0.60000:deepvariant:3,11,0
- chr22 15697906 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:37:28,9:0.24324:deepvariant:3,0,21
- chr22 16522778 . C T 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:19:12,7:0.36842:deepvariant:2,0,15
- chr22 16523506 . T A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:15:11,4:0.26667:small_model:14,0,17
- chr22 16573866 . T A 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:4,4:0.50000:deepvariant:11,0,19
- chr22 16573907 . G A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:7:5,2:0.28571:small_model:9,0,29
- chr22 16573950 . G T 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:16:9:5,4:0.44444:small_model:16,0,28
- chr22 16883667 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:1,19,0
- chr22 16883672 . A C 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:small_model:9,30,0
- chr22 16883682 . C T 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:3,3:0.50000:deepvariant:3,16,0
- chr22 16883701 . T G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:5,3:0.37500:deepvariant:0,17,0
- chr22 16883709 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:8:0,3:0.37500:deepvariant:0,18,0
- chr22 16883776 . T C 23.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:8:0,8:1.00000:small_model:23,35,0
- chr22 16883786 . C T 76.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:8:5,3:0.37500:small_model:87,19,0
- chr22 16883802 . C T 65.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:65:8:5,3:0.37500:small_model:67,87,0
- chr22 16890125 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,4:0.57143:deepvariant:0,17,0
- chr22 16890133 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,16,0
- chr22 16890147 . G T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:11,30,0
- chr22 16890162 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:2,22,0
- chr22 16890168 . G A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,3:0.50000:deepvariant:2,18,0
- chr22 16890174 . A G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:3,3:0.50000:deepvariant:1,18,0
- chr22 16890177 . C T 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:2,3:0.50000:deepvariant:4,19,0
- chr22 16890191 . G C 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,6:1.00000:deepvariant:3,22,0
- chr22 16890195 . G C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:2,21,0
- chr22 16890197 . G A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:13,21,0
- chr22 16898506 . G A 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:7:0,7:1.00000:small_model:16,32,0
- chr22 16898777 . A C 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:2:13:0,7:0.53846:deepvariant:1,51,0
- chr22 16898865 . T C 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:13:5,8:0.61538:deepvariant:2,18,0
- chr22 16898955 . T A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:12:0,12:0.66667:deepvariant:10,51,0
- chr22 16899017 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:13:1,8:0.61538:deepvariant:2,21,0
- chr22 16899124 . A T 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,26,0
- chr22 16899139 . T C 77.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:9:0,9:0.44444:small_model:76,48,8
- chr22 16899139 . T G 77.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:9:0,5:0.55556:small_model:76,44,0
- chr22 16899145 . T C 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:9:0,9:1.00000:small_model:8,31,0
- chr22 16899163 . G A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:0,5:0.55556:deepvariant:3,16,0
- chr22 16899164 . T A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:9:0,9:1.00000:deepvariant:11,25,0
- chr22 16899171 . C T 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:9:0,9:1.00000:small_model:18,28,0
- chr22 16899173 . C A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:1,8:0.55556:deepvariant:8,38,0
- chr22 16899173 . C G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:1,3:0.33333:deepvariant:8,32,1
- chr22 16899176 . T A 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:9:0,8:0.33333:deepvariant:11,38,6
- chr22 16899176 . T G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:9:0,5:0.55556:deepvariant:11,38,0
- chr22 16899184 . A C 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:9:0,9:1.00000:deepvariant:13,25,0
- chr22 16899191 . G T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:9:0,9:1.00000:deepvariant:9,24,0
- chr22 16899224 . T A 20.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:8:0,5:0.62500:small_model:20,26,0
- chr22 16899225 . G A 25.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:25:8:0,8:1.00000:small_model:25,34,0
- chr22 16899233 . A C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:11,20,0
- chr22 16899249 . G A 31 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:30:5:0,5:1.00000:small_model:31,35,0
- chr22 16899257 . C A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:10,18,0
- chr22 16899267 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:0,9:1.00000:deepvariant:0,18,0
- chr22 16899284 . C T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:9:0,9:1.00000:deepvariant:7,20,0
- chr22 16899287 . G A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:9:1,8:0.88889:deepvariant:8,19,0
- chr22 16899319 . A C 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:0,9:0.44444:deepvariant:20,24,3
- chr22 16899319 . A T 21.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:0,5:0.55556:deepvariant:20,24,0
- chr22 16899325 . G T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:9:0,9:1.00000:small_model:11,22,0
- chr22 16899327 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:9:4,5:0.55556:deepvariant:1,10,0
- chr22 16899336 . T A 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:8:0,8:1.00000:deepvariant:13,24,0
- chr22 16899343 . C T 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:9:0,9:1.00000:deepvariant:13,25,0
- chr22 16899346 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:4,5:0.55556:deepvariant:3,11,0
- chr22 16899354 . T A 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:0,9:0.55556:deepvariant:22,34,0
- chr22 16899354 . T C 23.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:0,4:0.44444:deepvariant:22,32,3
- chr22 16899365 . G A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:9:0,9:1.00000:small_model:14,32,0
- chr22 16899369 . A G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:8:0,8:1.00000:small_model:13,22,0
- chr22 16899384 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:8:1,7:0.87500:deepvariant:5,20,0
- chr22 16899396 . G A 23.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:8:0,8:0.50000:deepvariant:22,46,0
- chr22 16899403 . A C 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:7:0,7:1.00000:deepvariant:7,21,0
- chr22 16899409 . C A 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,6:0.85714:deepvariant:3,20,0
- chr22 16899421 . G A 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,18,0
- chr22 16899422 . T A 19.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,4:0.80000:small_model:18,15,0
- chr22 16899433 . G C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:1,20,0
- chr22 16899436 . T G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:2,5:0.71429:deepvariant:4,22,0
- chr22 16899443 . T C 6.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:1,6:0.85714:deepvariant:5,22,0
- chr22 16899512 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:2,19,0
- chr22 16899520 . A T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:0,6:1.00000:deepvariant:5,19,0
- chr22 16899527 . C T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,5:0.83333:deepvariant:5,19,0
- chr22 16899531 . G C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:6,20,0
- chr22 16899537 . A G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,21,0
- chr22 16899542 . T A 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:5:0,5:1.00000:small_model:20,23,0
- chr22 16899546 . C T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:1,5:0.83333:deepvariant:5,19,0
- chr22 16899547 . A G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,21,0
- chr22 16899565 . T A 13.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,16,0
- chr22 16899589 . T C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:2,24,0
- chr22 16899590 . A G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,5:0.83333:deepvariant:3,22,0
- chr22 16899592 . T G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:1,5:0.83333:deepvariant:1,18,0
- chr22 16899594 . A C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,6:1.00000:deepvariant:3,19,0
- chr22 16899610 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:1,19,0
- chr22 16899611 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:0,6:1.00000:deepvariant:1,19,0
- chr22 16899618 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:0,5:0.83333:deepvariant:4,20,0
- chr22 16899623 . T A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:7,22,0
- chr22 16899633 . C G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:3,21,0
- chr22 16899635 . A T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:3,22,0
- chr22 16899640 . C A 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,6:1.00000:deepvariant:5,23,0
- chr22 16899644 . C T 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:7,22,0
- chr22 16899654 . G T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,5:0.83333:deepvariant:11,22,0
- chr22 16899664 . C A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,22,0
- chr22 16899665 . T G 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,5:0.83333:deepvariant:8,22,0
- chr22 16899666 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:deepvariant:10,23,0
- chr22 16899667 . T G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,21,0
- chr22 16899669 . C T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,22,0
- chr22 16899672 . G T 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,6:1.00000:deepvariant:7,23,0
- chr22 16899678 . T G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,5:0.83333:deepvariant:9,23,0
- chr22 16899682 . A C 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,6:1.00000:small_model:17,19,0
- chr22 16899688 . G T 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:6:0,5:0.83333:small_model:16,22,0
- chr22 16899692 . C T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,23,0
- chr22 16899703 . G T 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,5:0.83333:small_model:14,20,0
- chr22 16899714 . C G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:1,5:0.83333:deepvariant:10,25,0
- chr22 16899715 . A T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:9,24,0
- chr22 16899716 . T G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:9,25,0
- chr22 16899718 . C T 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:9,25,0
- chr22 16899723 . A C 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:14,17,0
- chr22 16899725 . A G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:1,5:0.83333:deepvariant:10,23,0
- chr22 16899734 . A C 11.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,5:0.83333:small_model:11,16,0
- chr22 16899737 . G A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,5:0.83333:small_model:12,18,0
- chr22 16899741 . C T 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:9,23,0
- chr22 16899742 . A C 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,6:1.00000:deepvariant:9,25,0
- chr22 16899759 . A T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:9,24,0
- chr22 16899762 . C A 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,25,0
- chr22 16899763 . A G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,5:0.83333:deepvariant:8,25,0
- chr22 16899765 . T G 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,24,0
- chr22 16899773 . G A 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:11,24,0
- chr22 16899774 . T A 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:11,23,0
- chr22 16899786 . C G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:1,5:0.83333:deepvariant:11,23,0
- chr22 16899787 . T A 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,6:1.00000:deepvariant:7,24,0
- chr22 16899790 . C T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:9,23,0
- chr22 16899795 . G C 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,6:1.00000:deepvariant:6,24,0
- chr22 16899796 . G A 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,5:0.83333:deepvariant:8,22,0
- chr22 16899799 . A G 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,5:1.00000:deepvariant:6,23,0
- chr22 16899806 . T A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,5:0.83333:deepvariant:7,22,0
- chr22 16899813 . T A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:13,28,0
- chr22 16899816 . C G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:8,22,0
- chr22 16899822 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,5:0.83333:small_model:11,20,0
- chr22 16899830 . T C 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:6:0,6:1.00000:small_model:17,29,0
- chr22 16899831 . G C 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,5:0.83333:deepvariant:6,23,0
- chr22 16899837 . A T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:13,33,0
- chr22 16899838 . G T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,23,0
- chr22 16899839 . C T 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:6,23,0
- chr22 16899849 . T A 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:8,21,0
- chr22 16899852 . G C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,6:1.00000:deepvariant:7,22,0
- chr22 16899859 . T A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,6:1.00000:deepvariant:7,22,0
- chr22 16899868 . T A 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,5:0.83333:deepvariant:7,23,0
- chr22 16899869 . A G 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:7,22,0
- chr22 16899883 . C T 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:1,5:0.83333:small_model:12,15,0
- chr22 16899893 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:12,22,0
- chr22 16899902 . A T 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:9,22,0
- chr22 16899909 . C T 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:9,24,0
- chr22 16899912 . C A 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:0,5:0.83333:deepvariant:7,22,0
- chr22 16899913 . A T 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,6:1.00000:deepvariant:8,25,0
- chr22 16899919 . C T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:6,23,0
- chr22 16899920 . T G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,5:0.83333:deepvariant:8,22,0
- chr22 16899922 . T C 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,5:0.83333:deepvariant:9,22,0
- chr22 16899923 . G A 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,5:0.83333:deepvariant:5,24,0
- chr22 16899927 . C A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:9,23,0
- chr22 16899937 . C A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:1,5:0.83333:deepvariant:9,25,0
- chr22 16899942 . C G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:1,5:0.83333:deepvariant:9,22,0
- chr22 16899948 . T C 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,5:0.83333:deepvariant:9,24,0
- chr22 16899949 . G A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:6:0,5:0.83333:deepvariant:8,25,0
- chr22 16899958 . T C 40.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:39:6:0,6:1.00000:small_model:40,45,0
- chr22 16899961 . T G 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:6:1,5:0.83333:deepvariant:7,23,0
- chr22 16899977 . A C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:1,18,0
- chr22 16899996 . T A 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,20,0
- chr22 16900074 . T C 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:10,16,0
- chr22 16900075 . A T 26.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,4:0.80000:small_model:26,14,0
- chr22 16900100 . C T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:1,21,0
- chr22 16900112 . C T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,4:0.80000:deepvariant:0,21,0
- chr22 16900127 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,22,0
- chr22 16900147 . T C 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:4,23,0
- chr22 16900151 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:5,23,0
- chr22 16900201 . A T 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:0,4:1.00000:deepvariant:3,21,0
- chr22 16900203 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,21,0
- chr22 16900204 . A T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:2,20,0
- chr22 16900211 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,4:0.80000:deepvariant:0,19,0
- chr22 16900213 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,21,0
- chr22 16900221 . C A 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,20,0
- chr22 16900223 . A T 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,18,0
- chr22 16900229 . T G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:4,20,0
- chr22 16900237 . G A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,4:0.80000:deepvariant:6,23,0
- chr22 16900262 . T C 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:13,21,0
- chr22 16900303 . T A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,19,0
- chr22 16900305 . G T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,4:0.80000:deepvariant:0,20,0
- chr22 16900313 . A T 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:8,28,0
- chr22 16900314 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:0,19,0
- chr22 16900324 . A T 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:0,4:1.00000:small_model:9,17,0
- chr22 16900327 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,19,0
- chr22 16900330 . A C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:9,22,0
- chr22 16900333 . T G 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,20,0
- chr22 16900335 . C A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:deepvariant:9,21,0
- chr22 16900340 . T A 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:4:0,4:1.00000:deepvariant:10,21,0
- chr22 16900379 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:small_model:10,17,0
- chr22 16900381 . A T 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,22,0
- chr22 16900387 . C T 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:14,17,0
- chr22 16900389 . C A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:4,20,0
- chr22 16900392 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:2,19,0
- chr22 16900405 . T C 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:8,21,0
- chr22 16900407 . G A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:small_model:9,20,0
- chr22 16900415 . T C 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,20,0
- chr22 16900426 . C G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,19,0
- chr22 16900429 . C T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:4,19,0
- chr22 16900432 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:0,4:0.80000:deepvariant:0,20,0
- chr22 16900433 . G A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:2,18,0
- chr22 16900440 . A T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:2,19,0
- chr22 16900478 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,4:0.80000:deepvariant:4,13,0
- chr22 16900480 . T A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,4:0.80000:deepvariant:4,14,0
- chr22 16900493 . C T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:8,15,0
- chr22 16900502 . T C 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:5,16,0
- chr22 16900510 . G A 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:5,17,0
- chr22 16900520 . G C 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,5:1.00000:small_model:13,17,0
- chr22 16900529 . T C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:6,18,0
- chr22 16900564 . T C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:2,19,0
- chr22 16900568 . C G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:1,4:0.80000:deepvariant:0,18,0
- chr22 16900572 . T A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:5,19,0
- chr22 16900596 . G A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,4:0.80000:deepvariant:14,23,0
- chr22 16900597 . T G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:deepvariant:10,22,0
- chr22 16900604 . T C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:small_model:11,17,0
- chr22 16900617 . C T 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:1,4:0.80000:deepvariant:13,23,0
- chr22 16900618 . G A 14 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,4:0.80000:deepvariant:13,23,0
- chr22 16900624 . A G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:deepvariant:11,21,0
- chr22 16900628 . A G 10.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:deepvariant:10,23,0
- chr22 16900629 . T A 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:deepvariant:10,22,0
- chr22 16900643 . C T 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:deepvariant:9,19,0
- chr22 16900646 . T G 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,19,0
- chr22 16900648 . C G 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,18,0
- chr22 16900653 . T C 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:9,22,0
- chr22 16900667 . T A 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:1,4:0.80000:deepvariant:8,22,0
- chr22 16900674 . A C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,5:1.00000:deepvariant:10,21,0
- chr22 16900691 . A C 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:small_model:12,23,0
- chr22 16900695 . A C 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:2,22,0
- chr22 16900700 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:1,22,0
- chr22 16900704 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,20,0
- chr22 16900706 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:3,21,0
- chr22 16900709 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:5,21,0
- chr22 16900711 . C A 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,4:0.80000:deepvariant:4,21,0
- chr22 16900729 . A T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:deepvariant:9,22,0
- chr22 16900732 . G A 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,22,0
- chr22 16900741 . A G 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,22,0
- chr22 16900744 . C T 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,4:0.80000:deepvariant:5,23,0
- chr22 16900745 . T G 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,4:0.80000:deepvariant:5,23,0
- chr22 16900747 . T G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,22,0
- chr22 16900754 . A T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,4:0.80000:deepvariant:6,21,0
- chr22 16900763 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,3:0.60000:deepvariant:1,17,0
- chr22 16900767 . G C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,3:0.60000:deepvariant:1,19,0
- chr22 16900768 . T G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,3:0.60000:deepvariant:3,19,0
- chr22 16900774 . A T 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:5,22,0
- chr22 16900784 . T G 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,4:0.80000:deepvariant:8,23,0
- chr22 16900787 . C T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:0,5:1.00000:deepvariant:7,23,0
- chr22 16900800 . A G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:deepvariant:11,23,0
- chr22 16900812 . C T 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:6,23,0
- chr22 16900816 . A T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,24,0
- chr22 16900817 . A T 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:4,22,0
- chr22 16900821 . T A 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:5,22,0
- chr22 16900826 . A C 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,21,0
- chr22 16900830 . A G 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,4:0.80000:deepvariant:8,21,0
- chr22 16900831 . A T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,21,0
- chr22 16900840 . C A 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:1,4:0.80000:deepvariant:9,21,0
- chr22 16900841 . A C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:9,22,0
- chr22 16900845 . C A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,21,0
- chr22 16900848 . G T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,5:1.00000:deepvariant:8,21,0
- chr22 16900854 . T G 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:1,4:0.80000:deepvariant:8,20,0
- chr22 16900855 . C T 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,21,0
- chr22 16900871 . T C 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:2,3:0.60000:deepvariant:8,19,0
- chr22 16900881 . A T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:0,4:1.00000:deepvariant:11,24,0
- chr22 16900895 . T G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,4:0.80000:deepvariant:11,24,0
- chr22 16900897 . G T 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:11,25,0
- chr22 16900899 . C T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:deepvariant:11,24,0
- chr22 16900905 . G A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,4:0.80000:deepvariant:10,24,0
- chr22 16900909 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:deepvariant:11,24,0
- chr22 16900917 . G C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,5:1.00000:deepvariant:12,24,0
- chr22 16900935 . C G 8.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,21,0
- chr22 16900939 . C T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:5:0,5:1.00000:small_model:18,24,0
- chr22 16900941 . A G 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,4:0.80000:deepvariant:5,22,0
- chr22 16900944 . G T 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:14,27,0
- chr22 16900953 . T A 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,4:0.80000:deepvariant:6,20,0
- chr22 16900958 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:5,20,0
- chr22 16900995 . T C 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:18,16,0
- chr22 16901009 . A G 12.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:deepvariant:12,18,0
- chr22 16901023 . A G 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,4:0.80000:deepvariant:13,22,0
- chr22 16901034 . C G 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,20,0
- chr22 16901035 . T A 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:5:0,5:1.00000:small_model:14,21,0
- chr22 16901039 . G A 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,4:0.80000:deepvariant:10,22,0
- chr22 16901053 . T A 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:4:0,4:1.00000:deepvariant:7,19,0
- chr22 16901061 . C T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,19,0
- chr22 16901062 . A G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,4:0.80000:deepvariant:9,23,0
- chr22 16901078 . A T 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:1,4:0.80000:deepvariant:7,23,0
- chr22 16901086 . C T 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:small_model:12,15,0
- chr22 16901089 . G T 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:5,22,0
- chr22 16901184 . G T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:0,4:0.80000:small_model:14,17,0
- chr22 16901213 . A C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:5:0,5:1.00000:small_model:16,20,0
- chr22 16901287 . T C 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,15,0
- chr22 16901374 . G C 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:2,21,0
- chr22 16901382 . G T 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,5:1.00000:deepvariant:2,22,0
- chr22 16901447 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,3:0.60000:deepvariant:2,16,0
- chr22 16901452 . A G 9.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:0,4:0.80000:deepvariant:9,23,0
- chr22 16901459 . T C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:2,3:0.60000:deepvariant:5,19,0
- chr22 16901467 . G T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:5:0,4:0.80000:deepvariant:8,25,0
- chr22 16901477 . C T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:6,21,0
- chr22 16901478 . C G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:1,4:0.80000:deepvariant:5,22,0
- chr22 16901479 . T A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:10,23,0
- chr22 16901487 . A G 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,3:0.60000:small_model:4,19,0
- chr22 16901495 . T C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:10,23,0
- chr22 16901496 . G C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:0,4:0.80000:deepvariant:1,18,0
- chr22 16901502 . T A 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:5,22,0
- chr22 16901545 . T C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:5:0,5:1.00000:deepvariant:5,22,0
- chr22 16901546 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:0,5:1.00000:deepvariant:4,20,0
- chr22 16901564 . T A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:0,4:1.00000:deepvariant:5,23,0
- chr22 16901567 . G C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:0,5:1.00000:deepvariant:11,23,0
- chr22 16901573 . A C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:4,19,0
- chr22 16901599 . T G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,3:0.60000:deepvariant:2,18,0
- chr22 16901601 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,18,0
- chr22 16901607 . T G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,18,0
- chr22 16901628 . A T 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:0,5:1.00000:deepvariant:3,21,0
- chr22 16901668 . C G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,13,0
- chr22 16901674 . C G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:small_model:11,24,0
- chr22 16902035 . A C 10.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,26,0
- chr22 16983127 . T C 19.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:18:4:0,4:1.00000:small_model:0,41,17
- chr22 16983149 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:5:4:0,3:0.75000:deepvariant:0,38,19
- chr22 16983150 . T G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:3:4:1,3:0.75000:deepvariant:0,39,19
- chr22 17002358 . G A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:small_model:11,12,0
- chr22 17002373 . T C 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:5,20,0
- chr22 17002398 . G T 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,3:1.00000:deepvariant:4,20,0
- chr22 17002400 . A G 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:2,20,0
- chr22 17002430 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:0,3:1.00000:deepvariant:0,20,0
- chr22 17002448 . T A 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:11,12,0
- chr22 17002453 . G A 29.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:3:0,3:1.00000:small_model:29,28,0
- chr22 17002461 . G C 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:12,14,0
- chr22 17780832 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:14:8,4:0.28571:deepvariant:2,0,20
- chr22 18546556 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:16:12,4:0.25000:deepvariant:1,0,8
- chr22 22711769 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,8,0
- chr22 24411768 . G A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:10,2:0.15385:deepvariant:7,0,34
- chr22 24411775 . A C 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:13:11,2:0.15385:deepvariant:7,0,29
- chr22 24412314 . C T 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:12:10,2:0.16667:deepvariant:14,0,45
- chr22 24412538 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:9,2:0.16667:deepvariant:2,0,31
- chr22 24412544 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:11:9,2:0.18182:deepvariant:1,0,28
- chr22 24415554 . G A 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:7:11:9,2:0.18182:deepvariant:5,0,32
- chr22 24415633 . T G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:12:10,2:0.16667:deepvariant:13,0,38
- chr22 24416840 . A T 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:9:14:12,2:0.14286:deepvariant:8,0,38
- chr22 24416864 . C G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:14:12,2:0.14286:deepvariant:11,0,39
- chr22 24416976 . C T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:14:12,2:0.14286:deepvariant:13,0,45
- chr22 24417060 . C T 8.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:8:14:12,2:0.14286:deepvariant:7,0,36
- chr22 29581745 . T G 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/.:3:19:9,4:0.21053:deepvariant:6,0,34
- chr22 29582902 . T C 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:12:3,5:0.41667:deepvariant:5,0,6
- chr22 29582958 . T G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:11:3,5:0.45454:deepvariant:7,5,0
- chr22 35942620 . A G 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:12:9:5,3:0.33333:small_model:11,0,43
- chr22 37687291 . A G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:11:8:6,2:0.25000:small_model:10,0,31
- chr22 37687380 . A C 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:14:10:7,3:0.30000:small_model:13,0,31
- chr22 38572184 . G C 8.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:21:14,5:0.23810:deepvariant:4,0,0
- chr22 38652821 . T A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:11,4:0.26667:deepvariant:3,0,19
- chr22 38652823 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:15:11,4:0.26667:deepvariant:2,0,20
- chr22 38652887 . G A 8.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:0,6:1.00000:deepvariant:7,9,0
- chr22 43560315 . G A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:4:1,3:0.75000:small_model:13,0,18
- chr22 43560395 . C T 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:14,2:0.12500:deepvariant:3,0,10
- chr22 43761933 . T C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:21:15,6:0.28571:small_model:9,0,37
- chr22 46956441 . C G 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:18:2,14:0.77778:deepvariant:1,17,0
- chr22 47260417 . C T 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:5:16:13,3:0.18750:deepvariant:2,0,19
- chr22 47260439 . C T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:17:13,4:0.23529:deepvariant:4,0,18
- chr22 49114708 . T C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:13:10:7,3:0.30000:small_model:13,0,33
- chr22 49135329 . T C 14.9 PASS . GT:GQ:DP:AD:VAF:PL 1/1:7:26:21,5:0.19231:13,6,0
- chr22 49660438 . C A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:15,8:0.34783:deepvariant:4,0,17
- chr22 49660439 . C T 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:15,8:0.34783:deepvariant:4,0,17
- chr22 49660443 . G A 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:6:23:15,8:0.34783:deepvariant:4,0,18
- chr22 50533426 . A C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:0,7:1.00000:deepvariant:0,7,0
- chr22 50533442 . G A 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,6:1.00000:small_model:13,14,0
- chr22 50533446 . T C 7.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:6:0,6:1.00000:deepvariant:6,13,0
- chr22 50533450 . A G 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:0,6:1.00000:deepvariant:5,13,0
- chr22 50533470 . C A 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:1,6:0.85714:deepvariant:6,10,0
- chr22 50533490 . T C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:6:0,5:0.83333:deepvariant:11,15,0
- chr22 50533494 . A G 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:11,20,0
- chr22 50533499 . A G 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:6:0,6:1.00000:small_model:13,23,0
- chr22 50533556 . T C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:9,3,0
- chr22 50533582 . A G 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,3:1.00000:deepvariant:10,5,0
- chr22 50533587 . A G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:3:0,3:1.00000:deepvariant:9,9,0
- chr22 50533647 . A C 6.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:3,4:0.57143:deepvariant:3,2,0
- chr22 50533707 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:1.00000:deepvariant:1,9,0
- chr22 50533715 . A G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:0,4:1.00000:deepvariant:2,10,0
- chr22 50533736 . A C 26.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:26:5:2,3:0.60000:small_model:26,0,34
- chr22 50533804 . A G 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:10:5:3,2:0.40000:small_model:9,0,21
- chr22 50535213 . C A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:4:8:5,3:0.37500:deepvariant:4,0,7
- chr22 50783473 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/1:3:19:14,4:0.21053:deepvariant:0,0,18
- chrX 43611 . A G 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:10,98,0
- chrX 66845 . G A 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:11,98,0
- chrX 95872 . C G 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:3,4:0.57143:deepvariant:1,96,0
- chrX 335668 . G A 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:4:2:0,2:1.00000:deepvariant:0,102,5
- chrX 720046 . A G 20.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:5:0,5:1.00000:deepvariant:20,98,0
- chrX 889196 . G T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,3:1.00000:deepvariant:1,96,0
- chrX 889314 . G A 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:12,98,0
- chrX 1274798 . T C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,98,0
- chrX 1274805 . A C 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:0,96,0
- chrX 1274813 . A C 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:6:0,6:1.00000:small_model:12,98,0
- chrX 1274818 . T C 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:6:0,6:1.00000:small_model:13,98,0
- chrX 1274841 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,5:0.83333:deepvariant:0,96,0
- chrX 1274845 . C G 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:6:0,6:1.00000:small_model:15,98,0
- chrX 1274851 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:1,5:0.83333:deepvariant:2,97,0
- chrX 7730151 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:3,3:0.50000:deepvariant:0,96,0
- chrX 7733419 . T A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:9:5,4:0.44444:deepvariant:3,97,0
- chrX 14822432 . G A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:0,4:0.80000:deepvariant:11,98,0
- chrX 14849994 . T C 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:deepvariant:15,98,0
- chrX 14850001 . G A 10.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrX 14850065 . A G 24.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:24:2:0,2:1.00000:small_model:24,99,0
- chrX 14850216 . G C 33.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:33:2:0,2:1.00000:small_model:33,99,0
- chrX 14850269 . T C 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,98,0
- chrX 14850278 . G A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,96,0
- chrX 14850280 . T C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,96,0
- chrX 14850347 . T C 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,98,0
- chrX 14850364 . A G 20.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:2:0,2:1.00000:small_model:20,98,0
- chrX 58584093 . C G 16.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrX 58584109 . C T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrX 58849969 . T A 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrX 59842962 . G C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:2,97,0
- chrX 60195793 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:4,4:0.50000:deepvariant:1,96,0
- chrX 60196097 . T C 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:3,5:0.62500:deepvariant:1,96,0
- chrX 60604085 . C T 8.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:8:2,6:0.75000:deepvariant:8,98,0
- chrX 60922273 . T A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:0,2:0.66667:deepvariant:2,97,0
- chrX 60922310 . G A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,98,0
- chrX 60922481 . C G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:11,98,0
- chrX 60922513 . T C 5.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,97,0
- chrX 60922527 . C G 10.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:0,3:1.00000:small_model:9,98,0
- chrX 60923875 . C G 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:6,98,0
- chrX 60923888 . T C 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,98,0
- chrX 60923932 . A C 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,96,0
- chrX 60923961 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,96,0
- chrX 60923974 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,97,0
- chrX 82450071 . A G 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:15,98,0
- chrX 112794881 . C G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:7,98,0
- chrX 114251757 . G A 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,3:0.50000:deepvariant:2,97,0
- chrX 114252014 . C G 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:2,2:0.50000:deepvariant:0,96,0
- chrX 114966588 . C T 32.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:32:5:0,5:1.00000:small_model:32,99,0
- chrY 95891 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,97,0
- chrY 95946 . C T 9.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:9,98,0
- chrY 97355 . T C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,98,0
- chrY 578663 . G T 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:6:1,2:0.33333:deepvariant:3,95,0
- chrY 578670 . G C 6.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:0,3:1.00000:deepvariant:5,97,0
- chrY 942164 . G A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:deepvariant:16,98,0
- chrY 942405 . A G 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:deepvariant:14,98,0
- chrY 942431 . G T 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:12,98,0
- chrY 942438 . C T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,98,0
- chrY 1578457 . A G 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 0/0:17:4:0,4:1.00000:small_model:0,105,6
- chrY 10536038 . G C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,98,0
- chrY 10536047 . A G 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:4:0,4:1.00000:small_model:14,98,0
- chrY 10536050 . C T 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:4:0,4:1.00000:deepvariant:5,98,0
- chrY 10536053 . C T 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:0,4:1.00000:deepvariant:9,98,0
- chrY 10536061 . C T 23.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:4:0,4:1.00000:deepvariant:23,99,0
- chrY 10536110 . C T 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:5:0,4:0.80000:small_model:22,99,0
- chrY 10536117 . C T 19.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:5:0,5:1.00000:small_model:19,98,0
- chrY 10536205 . C G 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:5:1,4:0.80000:small_model:12,98,0
- chrY 10536280 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:small_model:1,96,0
- chrY 11131791 . T A 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,96,0
- chrY 11131793 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,96,0
- chrY 11131799 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,97,0
- chrY 11131806 . A C 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,96,0
- chrY 11131807 . T A 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,97,0
- chrY 11131808 . A G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:2,97,0
- chrY 11132830 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,96,0
- chrY 11132832 . C A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:1,96,0
- chrY 11132855 . A G 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,97,0
- chrY 11132856 . T G 6.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:5,97,0
- chrY 11132862 . T C 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,97,0
- chrY 12030302 . T G 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:11,98,0
- chrY 12105880 . G T 6.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,97,0
- chrY 12105884 . G C 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,98,0
- chrY 12105953 . A T 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 12105979 . T G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 12317682 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:1,96,0
- chrY 12318423 . G T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:2,5:0.71429:deepvariant:1,96,0
- chrY 12318629 . T G 5.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:2,5:0.71429:deepvariant:3,97,0
- chrY 12318642 . C G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:6:1,4:0.66667:deepvariant:4,97,0
- chrY 12500360 . G A 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:deepvariant:18,98,0
- chrY 21089754 . T A 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:1,2:0.50000:deepvariant:11,98,0
- chrY 21164019 . G A 26.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:26:4:0,4:1.00000:small_model:26,99,0
- chrY 21186815 . C A 22.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:23:3:0,3:1.00000:small_model:22,99,0
- chrY 21186818 . T G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,98,0
- chrY 21186854 . C A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:deepvariant:13,98,0
- chrY 21186856 . A C 11.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:deepvariant:11,98,0
- chrY 21186857 . G T 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:13,98,0
- chrY 21186902 . G T 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:deepvariant:12,98,0
- chrY 21186930 . A T 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:deepvariant:15,98,0
- chrY 22750133 . T C 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrY 26150649 . C T 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 27635281 . C G 19 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:deepvariant:18,98,0
- chrY 27903167 . T C 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,3:0.50000:deepvariant:3,97,0
- chrY 27903355 . A T 7.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:5:2,3:0.60000:deepvariant:6,98,0
- chrY 27903374 . G C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:5:1,4:0.80000:deepvariant:9,98,0
- chrY 27903616 . G C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:1,2:0.66667:deepvariant:11,98,0
- chrY 28141790 . G C 21.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:0.50000:deepvariant:19,96,0
- chrY 28442213 . A T 23.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:0,2:0.33333:deepvariant:21,97,4
- chrY 28442440 . G T 20.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:6:0,2:0.33333:deepvariant:20,98,10
- chrY 28497961 . G C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 28585337 . C A 27.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:28:3:0,3:1.00000:small_model:27,99,0
- chrY 28585985 . T G 70.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:70:3:0,3:1.00000:small_model:70,99,0
- chrY 28586017 . T A 20.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:20:3:0,2:0.66667:small_model:20,98,0
- chrY 28586643 . A T 36.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:37:2:0,2:1.00000:small_model:36,99,0
- chrY 28719646 . A T 6.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,97,0
- chrY 29085893 . C T 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,98,0
- chrY 29086780 . A T 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 29298017 . G A 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:4,97,0
- chrY 29298222 . G T 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:10,98,0
- chrY 29298290 . T A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,97,0
- chrY 29348864 . A G 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,98,0
- chrY 29348947 . T C 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:18,98,0
- chrY 29349014 . T C 16.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 29349250 . A G 9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:8,98,0
- chrY 29349328 . A G 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,97,0
- chrY 29349364 . C T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,98,0
- chrY 29422570 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,97,0
- chrY 30157690 . G A 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,98,0
- chrY 30345832 . G T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 30345833 . A T 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,98,0
- chrY 30443838 . C A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 30444337 . G C 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 30444708 . C G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 30445328 . G T 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 30445365 . A G 4.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,96,0
- chrY 30445397 . G C 14.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:14,98,0
- chrY 30446156 . T A 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 30480164 . T G 9.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:deepvariant:8,98,0
- chrY 31613157 . T G 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 31683145 . A G 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 31862982 . C G 4.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:small_model:2,97,0
- chrY 31891313 . C G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:2,97,0
- chrY 31891441 . T G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:1,96,0
- chrY 31891472 . T A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.85714:deepvariant:0,96,0
- chrY 31891615 . T C 6.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:7:1,6:0.85714:deepvariant:5,98,0
- chrY 31891686 . C T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:2,96,0
- chrY 31891692 . C T 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.85714:deepvariant:0,96,0
- chrY 31891699 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:7:1,6:0.85714:deepvariant:0,96,0
- chrY 31891764 . G C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:7:1,6:0.85714:deepvariant:1,96,0
- chrY 31891940 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,6:0.85714:deepvariant:3,97,0
- chrY 31891964 . A C 4.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:7:1,6:0.85714:deepvariant:2,97,0
- chrY 31893241 . C A 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,96,0
- chrY 31893243 . C A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,96,0
- chrY 31893294 . G A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,96,0
- chrY 31902510 . G A 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:deepvariant:9,98,0
- chrY 31902828 . C T 3.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:1,4:0.80000:deepvariant:1,96,0
- chrY 31903172 . C G 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:2,3:0.60000:deepvariant:2,97,0
- chrY 31903181 . A C 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:5:1,4:0.80000:deepvariant:11,98,0
- chrY 31903182 . T A 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:5:1,4:0.80000:deepvariant:10,98,0
- chrY 31903207 . T A 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,96,0
- chrY 31903319 . T A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:5:2,3:0.60000:deepvariant:0,96,0
- chrY 31903541 . T C 8.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:0,3:1.00000:deepvariant:8,98,0
- chrY 32460449 . G C 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 32460984 . T G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 32461059 . C A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 32461450 . T G 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,98,0
- chrY 32461741 . G T 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 32461775 . G A 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 32461993 . C A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 32462077 . A T 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 32462210 . G A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 32462573 . G A 14.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:14,98,0
- chrY 32462579 . C T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 32462793 . A G 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 32462866 . T C 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 32463080 . A G 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 32463193 . A T 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 32463315 . T A 13.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 32463347 . C G 15.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,98,0
- chrY 32463359 . G C 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 32463409 . A G 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 32463460 . A T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 32463537 . G C 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 32463548 . G A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 32463557 . G C 11.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:deepvariant:11,98,0
- chrY 32463581 . T C 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 32463624 . A G 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:2:0,2:1.00000:deepvariant:2,97,0
- chrY 32463707 . G T 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,98,0
- chrY 32463723 . T G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,98,0
- chrY 32463771 . T C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 32463815 . C T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 32606676 . T C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:16,98,0
- chrY 32606942 . C G 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:17,98,0
- chrY 32607472 . A G 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:16,98,0
- chrY 32762794 . A T 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:1,96,0
- chrY 33524339 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,96,0
- chrY 33525476 . G T 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:17,98,0
- chrY 33528670 . G A 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:5:2,2:0.40000:deepvariant:2,97,0
- chrY 34634381 . C A 12.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:1,2:0.66667:deepvariant:12,98,0
- chrY 36401079 . C G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 36401188 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:1,2:0.66667:deepvariant:10,98,0
- chrY 36402551 . T A 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:2,2:0.50000:deepvariant:3,97,0
- chrY 36402692 . G T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,98,0
- chrY 36402899 . C T 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:1,2:0.66667:deepvariant:11,98,0
- chrY 36402946 . A G 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 36402987 . T A 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,97,0
- chrY 36402991 . T C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 36403001 . C G 7.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,98,0
- chrY 36403060 . A T 8.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:8,98,0
- chrY 36403103 . G T 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,98,0
- chrY 36760410 . A G 8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,98,0
- chrY 37029483 . A G 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrY 37029666 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,97,0
- chrY 37029977 . A G 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:0,96,0
- chrY 37030790 . T C 6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:4:1,3:0.75000:deepvariant:4,97,0
- chrY 37700090 . C G 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 39880591 . T A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 39880639 . A T 15.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,98,0
- chrY 39882099 . A T 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:2:0,2:1.00000:small_model:18,98,0
- chrY 39882890 . T C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 39883144 . G T 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 39966208 . T A 15.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,98,0
- chrY 39966222 . T C 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 39966398 . G A 17.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,98,0
- chrY 39966490 . G T 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:17,98,0
- chrY 40017049 . T A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:0,2:0.66667:deepvariant:5,97,0
- chrY 40808522 . A T 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrY 40808601 . G A 7.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,98,0
- chrY 40808670 . C T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 42804136 . C G 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 42804339 . C T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 42804414 . A T 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 42805270 . A G 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrY 42805287 . T C 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:10,98,0
- chrY 42841809 . T G 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,97,0
- chrY 42842115 . T A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 42842128 . A G 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 42842401 . A T 9.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:2:0,2:1.00000:small_model:8,98,0
- chrY 42842414 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,96,0
- chrY 42842752 . C A 10.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,98,0
- chrY 42842760 . T C 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,98,0
- chrY 42842902 . A G 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 42842947 . A G 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:1,2:0.66667:deepvariant:12,98,0
- chrY 43236910 . T C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 43236923 . T A 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 43237023 . C A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 43237121 . A T 15.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,98,0
- chrY 43237133 . C T 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,98,0
- chrY 43237157 . T C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 43237193 . C G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 43237317 . C T 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,96,0
- chrY 43237326 . A C 9.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,98,0
- chrY 43237328 . C A 12.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 43237371 . T A 17.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:17,98,0
- chrY 43237399 . G A 17.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,98,0
- chrY 43237446 . T A 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,98,0
- chrY 43237575 . T C 14.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:4:0,4:1.00000:small_model:14,98,0
- chrY 44796517 . A T 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 44798630 . T A 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:7:0,7:1.00000:small_model:15,98,0
- chrY 44798715 . G A 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,7:1.00000:small_model:15,98,0
- chrY 44799658 . T A 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:0,7:1.00000:small_model:15,98,0
- chrY 44800066 . A T 16 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:7:0,7:1.00000:small_model:15,98,0
- chrY 45158472 . T C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 45158582 . T A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 45159341 . T C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 45159520 . G T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 45161062 . G A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 45161334 . T C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 45161442 . A C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 45161506 . T C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 45161550 . T G 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 45587466 . G C 16.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:16,98,0
- chrY 45591182 . A G 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 45591401 . G T 15.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,98,0
- chrY 46297821 . C A 18.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:0,4:0.50000:deepvariant:16,96,0
- chrY 46307659 . A C 9.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:3:1,2:0.66667:deepvariant:8,98,0
- chrY 48072804 . G C 16.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 48072825 . A C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 48073153 . A G 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 48275475 . C T 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 48663212 . C T 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:10,98,0
- chrY 48663785 . T C 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,96,0
- chrY 48663790 . T A 6.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:5,97,0
- chrY 48663813 . C G 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrY 48665055 . A T 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 49074779 . C G 10.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:10,98,0
- chrY 49074846 . G T 8.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,98,0
- chrY 49074855 . G A 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,97,0
- chrY 49369517 . T A 4.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:3,97,0
- chrY 49437010 . A G 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:3:1,2:0.66667:deepvariant:9,98,0
- chrY 49514337 . G A 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,96,0
- chrY 49620241 . G A 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 49620308 . G C 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:2,97,0
- chrY 49620342 . A G 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrY 49620349 . G A 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 49874019 . A C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:1,96,0
- chrY 49874214 . T C 4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:6:2,4:0.66667:deepvariant:1,96,0
- chrY 49874548 . T C 15 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:7:1,6:0.85714:small_model:14,98,0
- chrY 49875382 . G A 10 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:7:1,6:0.85714:deepvariant:9,98,0
- chrY 50008172 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:10:5,5:0.50000:deepvariant:0,96,0
- chrY 50062482 . G C 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:2,98,0
- chrY 50115225 . G C 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,96,0
- chrY 50426352 . C A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 50510507 . A C 12.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,2:0.66667:deepvariant:11,98,0
- chrY 51310712 . C T 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 51310829 . T A 17.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 51310964 . T C 30.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:30:2:0,2:1.00000:small_model:30,99,0
- chrY 51311192 . C A 11.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrY 51311620 . T G 13.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,98,0
- chrY 51311988 . T A 7.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:6,98,0
- chrY 51312733 . T C 17.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:17,98,0
- chrY 51312828 . T C 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 51313172 . T C 13.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 51313581 . A G 16.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:16,98,0
- chrY 51891532 . G T 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 51891533 . A T 31 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:31:2:0,2:1.00000:small_model:31,99,0
- chrY 52273755 . G A 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 52273896 . G T 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 52273931 . G T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,98,0
- chrY 52273933 . A T 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 52273950 . A G 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,97,0
- chrY 52273959 . T C 13 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 52273976 . T A 14.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 52274056 . T C 17.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:17,98,0
- chrY 52595587 . A G 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:12,98,0
- chrY 52595746 . G A 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 52596511 . T G 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 52596691 . G T 11.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,98,0
- chrY 52596853 . T C 6.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,97,0
- chrY 52596876 . C G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrY 52918880 . T C 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:4,97,0
- chrY 52945340 . G A 9.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:9:4:1,3:0.75000:deepvariant:8,98,0
- chrY 52945465 . T A 13.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,98,0
- chrY 52945735 . A G 14.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,98,0
- chrY 52945798 . A G 10.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrY 52945851 . T C 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 52946185 . A G 7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:2:0,2:1.00000:deepvariant:5,98,0
- chrY 53038818 . T A 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,97,0
- chrY 53177235 . C G 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:4:1,3:0.75000:deepvariant:0,96,0
- chrY 53939716 . T G 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:2:0,2:1.00000:small_model:15,98,0
- chrY 54163817 . G A 21 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:21:2:0,2:1.00000:small_model:20,98,0
- chrY 54240923 . A T 4.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,97,0
- chrY 54240927 . C T 3.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 54241114 . T C 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:10,98,0
- chrY 54241193 . A G 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:deepvariant:10,98,0
- chrY 54241316 . C T 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:4,97,0
- chrY 54241537 . A G 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:2:0,2:1.00000:deepvariant:0,96,0
- chrY 54241881 . T C 5.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,97,0
- chrY 54242242 . A T 7.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:6,98,0
- chrY 54262127 . T C 11.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrY 54262422 . C A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 54262557 . C T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 54262724 . C A 12.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 54262813 . C A 7.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:8:2:0,2:1.00000:deepvariant:7,98,0
- chrY 54262943 . C A 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 54263227 . G A 13.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 54263420 . T C 16.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 54263433 . C A 9.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,98,0
- chrY 54263458 . G A 11.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,98,0
- chrY 54263647 . G A 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,98,0
- chrY 54263745 . T A 14.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,98,0
- chrY 54263763 . A T 13.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:13,98,0
- chrY 54263826 . G C 14.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:3:0,3:1.00000:small_model:14,98,0
- chrY 54263904 . A C 12.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:3:0,3:1.00000:small_model:12,98,0
- chrY 54263911 . A T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,3:1.00000:small_model:12,98,0
- chrY 54263933 . G A 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:3:0,3:1.00000:small_model:10,98,0
- chrY 54263966 . G T 14.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:3:0,3:1.00000:small_model:14,98,0
- chrY 54263995 . T A 15.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:3:0,3:1.00000:small_model:15,98,0
- chrY 54272660 . G A 3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 54483581 . G A 7.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:7:3:1,2:0.66667:deepvariant:6,98,0
- chrY 54483683 . A G 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 54485227 . T C 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,2:0.50000:deepvariant:2,97,0
- chrY 54523334 . T G 17.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:3:0,3:1.00000:small_model:17,98,0
- chrY 54523480 . T C 17.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:3:0,3:1.00000:small_model:17,98,0
- chrY 54523658 . G C 18.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:19:3:0,3:1.00000:small_model:18,98,0
- chrY 54563825 . A C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 54564148 . T A 3.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 54564325 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:2,97,0
- chrY 54640900 . T A 17 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 54691340 . T A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,97,0
- chrY 54693569 . C G 13.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:14:2:0,2:1.00000:small_model:13,98,0
- chrY 55365112 . G T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:2,97,0
- chrY 55374327 . C T 5.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:0,2:0.66667:deepvariant:3,97,0
- chrY 55374329 . A C 5.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:2:0,2:1.00000:deepvariant:3,97,0
- chrY 56259662 . G A 3.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrY 56631740 . G A 9.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,98,0
- chrY 56641534 . T C 12.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:12,98,0
- chrY 56641563 . C T 12.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:2:0,2:1.00000:small_model:11,98,0
- chrY 56641621 . A C 13.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:13:2:0,2:1.00000:small_model:13,98,0
- chrY 56642987 . T C 11.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrY 56643012 . A G 11 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:11:2:0,2:1.00000:small_model:10,98,0
- chrY 56750030 . G A 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 58284372 . T A 18.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:18:2:0,2:1.00000:small_model:18,98,0
- chrY 59479334 . G T 12.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:0,2:0.66667:deepvariant:12,98,0
- chrY 59480240 . A C 11.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:3:1,2:0.66667:deepvariant:11,98,0
- chrY 59481842 . T C 16.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:17:2:0,2:1.00000:small_model:16,98,0
- chrY 59787314 . C G 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:6:2,4:0.66667:deepvariant:3,97,0
- chrY 60046173 . A C 3.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:3:1,2:0.66667:deepvariant:1,96,0
- chrY 60053925 . A T 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:deepvariant:9,98,0
- chrY 60054040 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:2:0,2:1.00000:deepvariant:4,97,0
- chrY 60153500 . T A 16.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:16:4:0,4:1.00000:small_model:16,98,0
- chrY 60153569 . A G 4.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:1,3:0.75000:deepvariant:2,97,0
- chrY 60153632 . A T 4.1 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:1,96,0
- chrY 60153746 . A T 4.6 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:4:2,2:0.50000:deepvariant:2,97,0
- chrY 60154276 . G A 10.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:4:1,3:0.75000:deepvariant:9,98,0
- chrY 60274020 . T C 3.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 60274551 . T C 3.2 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:3:3:1,2:0.66667:deepvariant:0,96,0
- chrY 60274955 . A G 5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:3:1,2:0.66667:deepvariant:3,97,0
- chrY 60275260 . T G 5.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:3:1,2:0.66667:deepvariant:4,97,0
- chrY 60275296 . A C 15.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:15:2:0,2:1.00000:small_model:15,98,0
- chrY 60465543 . C A 10.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:10:2:0,2:1.00000:small_model:9,98,0
- chrY 60663869 . C A 23.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:7:0,7:0.57143:deepvariant:22,97,4
- chrY 60664519 . C T 3.9 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:8:3,5:0.62500:deepvariant:1,96,0
- chrY 60665072 . G T 3.5 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:0,96,0
- chrY 60665490 . G A 5.7 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:4,97,0
- chrY 60665720 . A G 5.8 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:6:5:1,4:0.80000:deepvariant:4,97,0
- chrY 60666396 . C A 12 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:12:4:1,3:0.75000:small_model:11,98,0
- chrY 60666874 . A T 4.3 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:4:4:1,3:0.75000:deepvariant:2,97,0
- chrY 60983909 . G A 5.4 PASS . GT:GQ:DP:AD:VAF:MID:PL 1/1:5:5:1,4:0.80000:deepvariant:3,97,0
- chrY 61875428 . G A 8.793 PASS FAU=2;FCU=0;FGU=1;FTU=0;RAU=2;RCU=0;RGU=0;RTU=0 GT:GQ:DP:AF:AD:NAF:NDP:NAD:AU:CU:GU:TU:NAU:NCU:NGU:NTU 0/1:8:5:0.8:0,4:0:13:0,0:4:0:1:0:0:0:13:0
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