 Thomas
|
0b6f1f3ffe
working scan no mem leaks because of pileup
|
vor 8 Monaten |
|
Thomas
|
9d84177b64
gz_writer + variants_stats + high depth ranges + BinCount depths + Bin depths
|
vor 8 Monaten |
|
Thomas
|
1cb6ad7442
gff + scan
|
vor 9 Monaten |
|
Thomas
|
e09d58cbdb
variants final stats
|
vor 9 Monaten |
|
Thomas
|
8ff2dc0b66
up alt cat
|
vor 9 Monaten |
|
Thomas
|
c085500a20
error handling
|
vor 10 Monaten |
|
Thomas
|
f83fe9a647
completing info and format
|
vor 10 Monaten |
|
Thomas
|
ddc5410ec4
0 in vcf
|
vor 10 Monaten |
|
Thomas
|
605ee768fb
json somatic stats
|
vor 10 Monaten |
|
Thomas
|
7d4f9c06da
m
|
vor 11 Monaten |
|
Thomas
|
a1b3c01b01
Integration to somatic pipe Severus Savana DeepSomatic / LongPhase up
|
vor 11 Monaten |
|
Thomas
|
62bb510dba
cleared syntax
|
vor 11 Monaten |
|
Thomas
|
add4a2ecc9
entropy filter // echtvar annotate
|
vor 11 Monaten |
|
Thomas
|
80ba19f211
annotate_with_constit_bam (HighConstitAlt + LowConstitDepth) // counts_ins_at // alteration cat
|
vor 11 Monaten |
|
Thomas
|
7e8f5a904b
up
|
vor 1 Jahr |
|
Thomas
|
b5468f9176
dorado: added kit-name in basecaller and usage of kit-name from pod files instead of config
|
vor 1 Jahr |
|
Thomas
|
14c829fadf
up dorado 0.9.0: added sequencing kit name for trim
|
vor 1 Jahr |
|
Thomas
|
ba66e761f7
VCF loader, new and better struct Variant, deepvariant loader
|
vor 1 Jahr |
|
Thomas
|
af8fd4c4d4
up
|
vor 1 Jahr |
|
Thomas
|
12f24b0405
callers: savana, severus; traits: Run (stderr and stdout log and print), Initialize (global config), Version, HasOutput
|
vor 1 Jahr |
|
Thomas
|
b692aefa9a
clairs phasing
|
vor 1 Jahr |
|
Thomas
|
62265a008b
DMR
|
vor 1 Jahr |
|
Thomas
|
b8dfc87b1e
dorado 0.8.1 cuda devices
|
vor 1 Jahr |
|
Thomas
|
b1c73a178e
update
|
vor 1 Jahr |
|
Thomas
|
63fc4f96cf
docker runner, deep_var
|
vor 1 Jahr |
|
Thomas
|
39730822d3
demux + merge
|
vor 1 Jahr |
