 Thomas
|
ddc5410ec4
0 in vcf
|
10 maanden geleden |
|
Thomas
|
fc37d1bc9e
up
|
10 maanden geleden |
|
Thomas
|
b1c023fb7f
up
|
10 maanden geleden |
|
Thomas
|
def7533bef
up
|
10 maanden geleden |
|
Thomas
|
cd0c877566
jq format rule
|
10 maanden geleden |
|
Thomas
|
3b783dbb80
README.md for jq snippets // better nanomonsv parse and variants saving
|
10 maanden geleden |
|
Thomas
|
c95d7f33a0
variants merging and json save
|
10 maanden geleden |
|
Thomas
|
605ee768fb
json somatic stats
|
10 maanden geleden |
|
Thomas
|
7d4f9c06da
m
|
11 maanden geleden |
|
Thomas
|
a1b3c01b01
Integration to somatic pipe Severus Savana DeepSomatic / LongPhase up
|
11 maanden geleden |
|
Thomas
|
ecc6803c77
VEP Sv
|
11 maanden geleden |
|
Thomas
|
0c0c97d84b
blake3 hash128
|
11 maanden geleden |
|
Thomas
|
fe80f53381
ok
|
11 maanden geleden |
|
Thomas
|
19e0144f68
tidy
|
11 maanden geleden |
|
Thomas
|
62bb510dba
cleared syntax
|
11 maanden geleden |
|
Thomas
|
9008256d21
VEP
|
11 maanden geleden |
|
Thomas
|
add4a2ecc9
entropy filter // echtvar annotate
|
11 maanden geleden |
|
Thomas
|
45e1063e97
filters BAM finished (del pos + 1) // begin ExternalAnnotations
|
11 maanden geleden |
|
Thomas
|
4c2b6e5fa5
sankey charming
|
11 maanden geleden |
|
Thomas
|
80ba19f211
annotate_with_constit_bam (HighConstitAlt + LowConstitDepth) // counts_ins_at // alteration cat
|
11 maanden geleden |
|
Thomas
|
e01ab06376
somatic pipeline / blake3 128 for annotations hash / seq from fasta at position +/- len, entropy
|
11 maanden geleden |
|
Thomas
|
3085d82cfd
typst fmt
|
11 maanden geleden |
|
Thomas
|
710bd6515c
annotations
|
11 maanden geleden |
|
Thomas
|
7e8f5a904b
up
|
1 jaar geleden |
|
Thomas
|
b5468f9176
dorado: added kit-name in basecaller and usage of kit-name from pod files instead of config
|
1 jaar geleden |
|
Thomas
|
14c829fadf
up dorado 0.9.0: added sequencing kit name for trim
|
1 jaar geleden |
|
Thomas
|
ba66e761f7
VCF loader, new and better struct Variant, deepvariant loader
|
1 jaar geleden |
|
Thomas
|
af8fd4c4d4
up
|
1 jaar geleden |
|
Thomas
|
12f24b0405
callers: savana, severus; traits: Run (stderr and stdout log and print), Initialize (global config), Version, HasOutput
|
1 jaar geleden |
|
Thomas
|
b692aefa9a
clairs phasing
|
1 jaar geleden |
