 Thomas
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44067c4310
assembler pipe
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7 tuntia sitten |
|
Thomas
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947fe471aa
save_into_lifted for Variants
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2 kuukautta sitten |
|
Thomas
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7ba042df8d
update
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3 kuukautta sitten |
|
Thomas
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211191d148
doc update
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4 kuukautta sitten |
|
Thomas
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116b2d7111
vcf_variants
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4 kuukautta sitten |
|
Thomas
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9db8c5ef4b
all callers implemented for slurm. testing in progress
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4 kuukautta sitten |
|
Thomas
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0d26c83b3e
BcfTools Slurm
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5 kuukautta sitten |
|
Thomas
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59232e836c
Update DeepVariant for slurm
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5 kuukautta sitten |
|
Thomas
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5d8b2bf45e
Pod5sRuns
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5 kuukautta sitten |
|
Thomas
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671e2ea3db
no warning
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5 kuukautta sitten |
|
Thomas
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1f42f2b8ef
Pod5sFlowCell
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5 kuukautta sitten |
|
Thomas
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ba99b771cc
rm collections
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5 kuukautta sitten |
|
Thomas
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4de4f971fe
In the CLUSTER !!!
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5 kuukautta sitten |
|
Thomas
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89fea92bf5
config toml
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5 kuukautta sitten |
|
Thomas
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37caffae61
upate version checker
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6 kuukautta sitten |
|
Thomas
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708d1fefb3
INSERTION depth wrong
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8 kuukautta sitten |
|
Thomas
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5d43d529e8
better bam_compo // WGSBamStats
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9 kuukautta sitten |
|
Thomas
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929c95c2d3
is file older now remove dir if so// DeepSomatic passed vcf path was wronggly pointing into DeepVariant mrd folder // nanomonsv is file older now check mrd and passed diag if older of respective bam
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10 kuukautta sitten |
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Thomas
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def4247123
DUPLICATION not for serverus
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10 kuukautta sitten |
|
Thomas
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418c754b01
DUPLICATION
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10 kuukautta sitten |
|
Thomas
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0e1603298a
flowcells sort by modified
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11 kuukautta sitten |
|
Thomas
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cf7c41a98c
dorardo up and emit-moves
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11 kuukautta sitten |
|
Thomas
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b28a6f37b0
savana alt/depth from info, added n_alt_depth for info and above for vcf_variant
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11 kuukautta sitten |
|
Thomas
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cc0ef4fcbe
Bug deletion desc when coming from BNDdesc
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11 kuukautta sitten |
|
Thomas
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3604b225cf
BND to del
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11 kuukautta sitten |
|
Thomas
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e8b86f0d83
annot repeatmasker
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11 kuukautta sitten |
|
Thomas
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74c6f4da7b
bam alt/depth
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11 kuukautta sitten |
|
Thomas
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a4df568492
bedrow overlaps par
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1 vuosi sitten |
|
Thomas
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17e88bd514
deletion desc n alt depth
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1 vuosi sitten |
|
Thomas
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5a323d50bc
clearer parse bnddesc
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1 vuosi sitten |
