 Thomas
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e8b86f0d83
annot repeatmasker
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hai 7 meses |
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Thomas
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74c6f4da7b
bam alt/depth
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hai 7 meses |
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Thomas
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49a95012cf
Annotation::VNTR
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hai 7 meses |
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Thomas
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a4df568492
bedrow overlaps par
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hai 7 meses |
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Thomas
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87a576356b
filter mapq
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hai 8 meses |
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Thomas
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c69dcf818c
filter mapq
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hai 8 meses |
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Thomas
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86513cba22
VCF write
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hai 8 meses |
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Thomas
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4c5672cc47
stats + callers() + bed compare
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hai 8 meses |
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Thomas
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23d0e0ea17
Trinucleotides and Early/Late annotations
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hai 8 meses |
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Thomas
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a5880b4b84
caller bug // callers shoud run info // remove_dir_if_exists
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hai 8 meses |
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Thomas
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03ec589273
macro and function for trait Should Run
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hai 8 meses |
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Thomas
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0b6f1f3ffe
working scan no mem leaks because of pileup
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hai 8 meses |
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Thomas
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980c173f72
variants rates + ncbi versions
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hai 8 meses |
|
Thomas
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9d84177b64
gz_writer + variants_stats + high depth ranges + BinCount depths + Bin depths
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hai 8 meses |
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Thomas
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57321e6099
variant.n_cosmic()
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hai 9 meses |
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Thomas
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e09d58cbdb
variants final stats
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hai 9 meses |
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Thomas
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8ff2dc0b66
up alt cat
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hai 9 meses |
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Thomas
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088093d58f
VariantsStats
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hai 9 meses |
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Thomas
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2cd05492a7
m
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hai 9 meses |
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Thomas
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ad0958ddb2
comments
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hai 9 meses |
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Thomas
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fde4568495
vep stats
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hai 10 meses |
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Thomas
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04ca65ee34
better err propagation; new jq consequence filter
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hai 10 meses |
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Thomas
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c085500a20
error handling
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hai 10 meses |
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Thomas
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6894b8a60f
err on json annot_init
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hai 10 meses |
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Thomas
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3b783dbb80
README.md for jq snippets // better nanomonsv parse and variants saving
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hai 10 meses |
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Thomas
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c95d7f33a0
variants merging and json save
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hai 10 meses |
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Thomas
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605ee768fb
json somatic stats
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hai 10 meses |
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Thomas
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7d4f9c06da
m
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hai 11 meses |
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Thomas
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a1b3c01b01
Integration to somatic pipe Severus Savana DeepSomatic / LongPhase up
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hai 11 meses |
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Thomas
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ecc6803c77
VEP Sv
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hai 11 meses |
