 Thomas
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f216c34dce
reduced clairS threads; added slurm_max_par default: 10; use of run! and run_many! in bam import
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hai 1 semana |
|
Thomas
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069f6f8b38
Added GATK mutect2
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hai 2 meses |
|
Thomas
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04885bee38
update
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hai 4 meses |
|
Thomas
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9db8c5ef4b
all callers implemented for slurm. testing in progress
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hai 4 meses |
|
Thomas
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5e4e7c0275
run and run_many macro
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hai 4 meses |
|
Thomas
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78f31bc229
PromRun
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hai 4 meses |
|
Thomas
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8dd3c41065
DeepVariant upate
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hai 4 meses |
|
Thomas
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59232e836c
Update DeepVariant for slurm
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hai 5 meses |
|
Thomas
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a8cfb4395c
Pod5Info update
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hai 5 meses |
|
Thomas
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1f42f2b8ef
Pod5sFlowCell
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hai 5 meses |
|
Thomas
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ba99b771cc
rm collections
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hai 5 meses |
|
Thomas
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4de4f971fe
In the CLUSTER !!!
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hai 5 meses |
|
Thomas
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5d43d529e8
better bam_compo // WGSBamStats
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hai 9 meses |
|
Thomas
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418c754b01
DUPLICATION
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hai 10 meses |
|
Thomas
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baa0c951ef
m
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hai 11 meses |
|
Thomas
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605c0c1c75
m
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hai 11 meses |
|
Thomas
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ba1814bf9c
print dorado status for basecall align
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hai 11 meses |
|
Thomas
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6dcb191dc4
print dorado status for basecall align
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hai 11 meses |
|
Thomas
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ea313eac14
from_fc
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hai 11 meses |
|
Thomas
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623c1f0264
from_flowcell
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hai 11 meses |
|
Thomas
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052e4c59b1
from_flowcell
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hai 11 meses |
|
Thomas
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f4fddded08
from_flowcell
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hai 11 meses |
|
Thomas
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cf7c41a98c
dorardo up and emit-moves
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hai 11 meses |
|
Thomas
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8fed952f37
bam add fn tag in compo
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hai 11 meses |
|
Thomas
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8f2710b5ae
dorado err
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hai 11 meses |
|
Thomas
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d361ec6c1d
comments
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hai 1 ano |
|
Thomas
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605ee768fb
json somatic stats
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hai 1 ano |
|
Thomas
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710bd6515c
annotations
|
hai 1 ano |
|
Thomas
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b5468f9176
dorado: added kit-name in basecaller and usage of kit-name from pod files instead of config
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hai 1 ano |
|
Thomas
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14c829fadf
up dorado 0.9.0: added sequencing kit name for trim
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hai 1 ano |
