 Thomas
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fe19eb6036
scan remove chrM
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4 giorni fa |
|
Thomas
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5133ac3efd
liftover
|
1 mese fa |
|
Thomas
|
478f26daf0
improved BAM INS detection
|
1 mese fa |
|
Thomas
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af50b44ea0
update VEP
|
2 mesi fa |
|
Thomas
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6f12252396
prom runs
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2 mesi fa |
|
Thomas
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955bd9fc0e
scan
|
2 mesi fa |
|
Thomas
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9db8c5ef4b
all callers implemented for slurm. testing in progress
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3 mesi fa |
|
Thomas
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b135d60d4e
callers
|
3 mesi fa |
|
Thomas
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901d8e4963
pipe metrics
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3 mesi fa |
|
Thomas
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5e4e7c0275
run and run_many macro
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3 mesi fa |
|
Thomas
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8b2c676daf
up
|
3 mesi fa |
|
Thomas
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78f31bc229
PromRun
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3 mesi fa |
|
Thomas
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6c52a16a21
SamtoolsMergeMany, slurm_pipe/import upate
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3 mesi fa |
|
Thomas
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4ac495035c
ClairS upate
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3 mesi fa |
|
Thomas
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0d26c83b3e
BcfTools Slurm
|
3 mesi fa |
|
Thomas
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1f42f2b8ef
Pod5sFlowCell
|
3 mesi fa |
|
Thomas
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ba99b771cc
rm collections
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3 mesi fa |
|
Thomas
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4de4f971fe
In the CLUSTER !!!
|
3 mesi fa |
|
Thomas
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93ee5d1c5e
up dorado
|
7 mesi fa |
|
Thomas
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929c95c2d3
is file older now remove dir if so// DeepSomatic passed vcf path was wronggly pointing into DeepVariant mrd folder // nanomonsv is file older now check mrd and passed diag if older of respective bam
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8 mesi fa |
|
Thomas
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3604b225cf
BND to del
|
10 mesi fa |
|
Thomas
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9157716ac1
find file
|
10 mesi fa |
|
Thomas
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3c577c1023
Flowcells
|
11 mesi fa |
|
Thomas
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23d0e0ea17
Trinucleotides and Early/Late annotations
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11 mesi fa |
|
Thomas
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a5880b4b84
caller bug // callers shoud run info // remove_dir_if_exists
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11 mesi fa |
|
Thomas
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91cde944f4
rationalization adn documentation of callers functions
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11 mesi fa |
|
Thomas
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0b6f1f3ffe
working scan no mem leaks because of pileup
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11 mesi fa |
|
Thomas
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9d84177b64
gz_writer + variants_stats + high depth ranges + BinCount depths + Bin depths
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11 mesi fa |
|
Thomas
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1cb6ad7442
gff + scan
|
11 mesi fa |
|
Thomas
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f3dda27be5
bitcode
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1 anno fa |
