 Thomas
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fe19eb6036
scan remove chrM
|
4 天之前 |
|
Thomas
|
5133ac3efd
liftover
|
1 月之前 |
|
Thomas
|
478f26daf0
improved BAM INS detection
|
1 月之前 |
|
Thomas
|
af50b44ea0
update VEP
|
2 月之前 |
|
Thomas
|
6f12252396
prom runs
|
2 月之前 |
|
Thomas
|
955bd9fc0e
scan
|
2 月之前 |
|
Thomas
|
9db8c5ef4b
all callers implemented for slurm. testing in progress
|
3 月之前 |
|
Thomas
|
b135d60d4e
callers
|
3 月之前 |
|
Thomas
|
901d8e4963
pipe metrics
|
3 月之前 |
|
Thomas
|
5e4e7c0275
run and run_many macro
|
3 月之前 |
|
Thomas
|
8b2c676daf
up
|
3 月之前 |
|
Thomas
|
78f31bc229
PromRun
|
3 月之前 |
|
Thomas
|
6c52a16a21
SamtoolsMergeMany, slurm_pipe/import upate
|
3 月之前 |
|
Thomas
|
4ac495035c
ClairS upate
|
3 月之前 |
|
Thomas
|
0d26c83b3e
BcfTools Slurm
|
3 月之前 |
|
Thomas
|
1f42f2b8ef
Pod5sFlowCell
|
3 月之前 |
|
Thomas
|
ba99b771cc
rm collections
|
3 月之前 |
|
Thomas
|
4de4f971fe
In the CLUSTER !!!
|
3 月之前 |
|
Thomas
|
93ee5d1c5e
up dorado
|
7 月之前 |
|
Thomas
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929c95c2d3
is file older now remove dir if so// DeepSomatic passed vcf path was wronggly pointing into DeepVariant mrd folder // nanomonsv is file older now check mrd and passed diag if older of respective bam
|
8 月之前 |
|
Thomas
|
3604b225cf
BND to del
|
10 月之前 |
|
Thomas
|
9157716ac1
find file
|
10 月之前 |
|
Thomas
|
3c577c1023
Flowcells
|
11 月之前 |
|
Thomas
|
23d0e0ea17
Trinucleotides and Early/Late annotations
|
11 月之前 |
|
Thomas
|
a5880b4b84
caller bug // callers shoud run info // remove_dir_if_exists
|
11 月之前 |
|
Thomas
|
91cde944f4
rationalization adn documentation of callers functions
|
11 月之前 |
|
Thomas
|
0b6f1f3ffe
working scan no mem leaks because of pileup
|
11 月之前 |
|
Thomas
|
9d84177b64
gz_writer + variants_stats + high depth ranges + BinCount depths + Bin depths
|
11 月之前 |
|
Thomas
|
1cb6ad7442
gff + scan
|
11 月之前 |
|
Thomas
|
f3dda27be5
bitcode
|
1 年之前 |
