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- [package]
- name = "desc_seq_lib"
- version = "0.1.0"
- edition = "2021"
- # See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
- [dependencies]
- env_logger = "^0.10.1"
- test-env-log = "0.2.8"
- minimap2 = { git = "https://github.com/jguhlin/minimap2-rs", features = ["simde"] }
- aligner_client = { git = "https://git.t0m4.fr/Thomas/aligner_client.git"}
- rust-htslib = "0.46.0"
- anyhow = "1.0.75"
- log = "0.4.19"
- rand = "0.8.4"
- uuid = { version = "1.6.1", features = ["serde", "v4"] }
- seq_io = "0.3.2"
- noodles-fasta = "0.34.0"
- noodles-vcf = "0.51.0"
- crossbeam = "0.8.4"
- pileup = { git = "https://git.t0m4.fr/Thomas/pileup.git" }
- libVariant = { git = "https://git.t0m4.fr/Thomas/libVariant.git" }
- crossbeam-channel = "0.5.12"
- test-log = "0.2.15"
- num-format = "0.4.4"
- petgraph = "0.6.4"
- indicatif = {version = "0.17.8", features = ["rayon"]}
- indicatif-log-bridge = "0.2.2"
- rayon = "1.8.0"
- dashmap = "5.5.3"
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