Startseite Erkunden Hilfe
Registrieren Anmelden
Thomas
/
pandora_lib_promethion
1
0
Fork 0
Dateien Issues 0 Pull-Requests 0 Wiki

Keine Beschreibung

Struktur: 6cb25899fa
Branches Tags
pandora_lib_pro...
ZIP TAR.GZ
Thomas 6cb25899fa dorado up to 0.8.1 changed demuxed names so new fn to find the bam file vor 1 Jahr
src 6cb25899fa dorado up to 0.8.1 changed demuxed names so new fn to find the bam file vor 1 Jahr
.gitignore 494efb6235 run vor 1 Jahr
Cargo.lock 63c5922d5d todo_variants_agg tested vor 1 Jahr
Cargo.toml f56aa5599c todo_variants_agg vor 1 Jahr
README.md 6cb25899fa dorado up to 0.8.1 changed demuxed names so new fn to find the bam file vor 1 Jahr
ok_cases.tsv 386de7c96a bam_ok vor 1 Jahr

README.md

For building required HTSlib:

sudo apt install cmake libclang-dev
  • minimap2
  • samtools
  • dorado

  • modkit

    cargo install --git https://github.com/nanoporetech/modkit.git

for variants:

  • VEP: cf pandora_lib_variants for VEP install